RNA–Protein interactions for RNA: ENST00000478197.1

C2orf88-207, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-207ENST00000478197 PDE3AQ14432 1141 aa18.85■□□□□ 0.61
C2orf88-207ENST00000478197 G2E3Q7L622 706 aa18.85■□□□□ 0.61
C2orf88-207ENST00000478197 RBM17Q96I25 401 aaKnown RBP18.85■□□□□ 0.61
C2orf88-207ENST00000478197 NLRP3Q96P20 1036 aa18.85■□□□□ 0.61
C2orf88-207ENST00000478197 METTL22Q9BUU2 404 aaPredicted RBP18.85■□□□□ 0.61
C2orf88-207ENST00000478197 UTP14AQ9BVJ6 771 aaKnown RBP18.85■□□□□ 0.61
C2orf88-207ENST00000478197 IQCA1LA6NCM1 817 aa18.84■□□□□ 0.61
C2orf88-207ENST00000478197 IARSP41252 1262 aaKnown RBP18.84■□□□□ 0.61
C2orf88-207ENST00000478197 TCIRG1Q13488 830 aa18.84■□□□□ 0.61
C2orf88-207ENST00000478197 GRIPAP1Q4V328 841 aa18.84■□□□□ 0.61
C2orf88-207ENST00000478197 SYNE4Q8N205 404 aa18.84■□□□□ 0.61
C2orf88-207ENST00000478197 LINS1Q8NG48 757 aa18.84■□□□□ 0.61
C2orf88-207ENST00000478197 KLRG1Q96E93 195 aa18.84■□□□□ 0.61
C2orf88-207ENST00000478197 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
C2orf88-207ENST00000478197 CHMP4BQ9H444 224 aaKnown RBP18.84■□□□□ 0.61
C2orf88-207ENST00000478197 MAP3K2Q9Y2U5 619 aa18.84■□□□□ 0.61
C2orf88-207ENST00000478197 SNED1Q8TER0 1413 aa18.83■□□□□ 0.61
C2orf88-207ENST00000478197 ALDH1L1O75891 902 aa18.83■□□□□ 0.6
C2orf88-207ENST00000478197 HSP90B1P14625 803 aaKnown RBP18.83■□□□□ 0.6
C2orf88-207ENST00000478197 CCT4P50991 539 aaKnown RBP18.83■□□□□ 0.6
C2orf88-207ENST00000478197 FRAT1Q92837 279 aaPredicted RBP18.83■□□□□ 0.6
C2orf88-207ENST00000478197 PSMD1Q99460 953 aa18.83■□□□□ 0.6
C2orf88-207ENST00000478197 PPEF1O14829 653 aaPredicted RBP18.82■□□□□ 0.6
C2orf88-207ENST00000478197 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
C2orf88-207ENST00000478197 CCDC191Q8NCU4 936 aa18.82■□□□□ 0.6
C2orf88-207ENST00000478197 JDP2Q8WYK2 163 aa18.82■□□□□ 0.6
C2orf88-207ENST00000478197 L3MBTL3Q96JM7 780 aaPredicted RBP18.82■□□□□ 0.6
C2orf88-207ENST00000478197 TMX4Q9H1E5 349 aaPredicted RBP18.82■□□□□ 0.6
C2orf88-207ENST00000478197 HDAC5Q9UQL6 1122 aa18.82■□□□□ 0.6
C2orf88-207ENST00000478197 DDX60Q8IY21 1712 aaKnown RBP18.82■□□□□ 0.6
C2orf88-207ENST00000478197 ABCC4O15439 1325 aa18.81■□□□□ 0.6
C2orf88-207ENST00000478197 TRIM27P14373 513 aa18.81■□□□□ 0.6
C2orf88-207ENST00000478197 SLC10A5Q5PT55 438 aa18.81■□□□□ 0.6
C2orf88-207ENST00000478197 CHADLQ6NUI6 762 aa18.81■□□□□ 0.6
C2orf88-207ENST00000478197 NLRP10Q86W26 655 aa18.81■□□□□ 0.6
C2orf88-207ENST00000478197 DZIP1LQ8IYY4 767 aaKnown RBP18.81■□□□□ 0.6
C2orf88-207ENST00000478197 ZNF541Q9H0D2 1346 aa18.8■□□□□ 0.6
C2orf88-207ENST00000478197 RRP1P56182 461 aaKnown RBP18.8■□□□□ 0.6
C2orf88-207ENST00000478197 INTS3Q68E01 1043 aaKnown RBP18.8■□□□□ 0.6
C2orf88-207ENST00000478197 ISCA1Q9BUE6 129 aa18.8■□□□□ 0.6
C2orf88-207ENST00000478197 SRCIN1Q9C0H9 1055 aa18.8■□□□□ 0.6
C2orf88-207ENST00000478197 TAF1P21675 1872 aa18.8■□□□□ 0.6
C2orf88-207ENST00000478197 FZD9O00144 591 aa18.79■□□□□ 0.6
C2orf88-207ENST00000478197 C3orf67Q6ZVT6 689 aa18.79■□□□□ 0.6
C2orf88-207ENST00000478197 TRMT112Q9UI30 125 aaKnown RBP18.79■□□□□ 0.6
C2orf88-207ENST00000478197 SH3TC1Q8TE82 1336 aa18.78■□□□□ 0.6
C2orf88-207ENST00000478197 BEND3Q5T5X7 828 aa18.78■□□□□ 0.6
C2orf88-207ENST00000478197 GPC2Q8N158 579 aa18.78■□□□□ 0.6
C2orf88-207ENST00000478197 TAF1DQ9H5J8 278 aaPredicted RBP18.78■□□□□ 0.6
C2orf88-207ENST00000478197 HACL1Q9UJ83 578 aa18.78■□□□□ 0.6
C2orf88-207ENST00000478197 POTEIP0CG38 1075 aa18.77■□□□□ 0.6
C2orf88-207ENST00000478197 POTEJP0CG39 1038 aa18.77■□□□□ 0.6
C2orf88-207ENST00000478197 AAMPQ13685 434 aa18.77■□□□□ 0.6
C2orf88-207ENST00000478197 LDHDQ86WU2 507 aa18.77■□□□□ 0.6
C2orf88-207ENST00000478197 JMYQ8N9B5 988 aa18.77■□□□□ 0.6
C2orf88-207ENST00000478197 CWC25Q9NXE8 425 aaPredicted RBP18.77■□□□□ 0.6
C2orf88-207ENST00000478197 ADAMTSL1Q8N6G6 1762 aa18.77■□□□□ 0.6
C2orf88-207ENST00000478197 COL4A5P29400 1685 aa18.76■□□□□ 0.59
C2orf88-207ENST00000478197 HCLS1P14317 486 aaPredicted RBP18.76■□□□□ 0.59
C2orf88-207ENST00000478197 EIF6P56537 245 aaKnown RBP18.76■□□□□ 0.59
C2orf88-207ENST00000478197 SLC4A10Q6U841 1118 aa18.76■□□□□ 0.59
C2orf88-207ENST00000478197 LARGE2Q8N3Y3 721 aa18.76■□□□□ 0.59
C2orf88-207ENST00000478197 MYD88Q99836 296 aa18.76■□□□□ 0.59
C2orf88-207ENST00000478197 ATP6V0A2Q9Y487 856 aa18.76■□□□□ 0.59
C2orf88-207ENST00000478197 LRRC37AA6NMS7 1700 aa18.75■□□□□ 0.59
C2orf88-207ENST00000478197 NEURL1BA8MQ27 555 aa18.75■□□□□ 0.59
C2orf88-207ENST00000478197 F6X3S4 739 aa18.75■□□□□ 0.59
C2orf88-207ENST00000478197 EPHX2P34913 555 aa18.75■□□□□ 0.59
C2orf88-207ENST00000478197 EAPPQ56P03 285 aaPredicted RBP18.75■□□□□ 0.59
C2orf88-207ENST00000478197 DDX46Q7L014 1031 aaKnown RBP18.75■□□□□ 0.59
C2orf88-207ENST00000478197 BBOX1O75936 387 aa18.74■□□□□ 0.59
C2orf88-207ENST00000478197 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
C2orf88-207ENST00000478197 PNMA8AQ86V59 439 aaPredicted RBP18.74■□□□□ 0.59
C2orf88-207ENST00000478197 DDX19BQ9UMR2 479 aa18.74■□□□□ 0.59
C2orf88-207ENST00000478197 CLEC11AQ9Y240 323 aa18.74■□□□□ 0.59
C2orf88-207ENST00000478197 GJA3Q9Y6H8 435 aa18.74■□□□□ 0.59
C2orf88-207ENST00000478197 PPIP5K2O43314 1243 aa18.73■□□□□ 0.59
C2orf88-207ENST00000478197 PCCAP05165 728 aaPredicted RBP18.73■□□□□ 0.59
C2orf88-207ENST00000478197 IGKV5-2P06315 115 aa18.73■□□□□ 0.59
C2orf88-207ENST00000478197 GNAI3P08754 354 aa18.73■□□□□ 0.59
C2orf88-207ENST00000478197 GCKRQ14397 625 aa18.73■□□□□ 0.59
C2orf88-207ENST00000478197 NIM1KQ8IY84 436 aa18.73■□□□□ 0.59
C2orf88-207ENST00000478197 ZBTB38Q8NAP3 1195 aaPredicted RBP18.73■□□□□ 0.59
C2orf88-207ENST00000478197 SUPT20HQ8NEM7 779 aa18.73■□□□□ 0.59
C2orf88-207ENST00000478197 SUPT16HQ9Y5B9 1047 aaKnown RBP18.73■□□□□ 0.59
C2orf88-207ENST00000478197 UTYO14607 1347 aa18.73■□□□□ 0.59
C2orf88-207ENST00000478197 LMOD1P29536 600 aaPredicted RBP18.72■□□□□ 0.59
C2orf88-207ENST00000478197 SLC51AQ86UW1 340 aa18.72■□□□□ 0.59
C2orf88-207ENST00000478197 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
C2orf88-207ENST00000478197 VPS33BQ9H267 617 aa18.72■□□□□ 0.59
C2orf88-207ENST00000478197 CREBZFQ9NS37 354 aa18.72■□□□□ 0.59
C2orf88-207ENST00000478197 C9orf78Q9NZ63 289 aaPredicted RBP18.72■□□□□ 0.59
C2orf88-207ENST00000478197 LTBP1Q14766 1721 aa18.71■□□□□ 0.59
C2orf88-207ENST00000478197 ATP5J2-PTCD1G3V325 749 aa18.71■□□□□ 0.59
C2orf88-207ENST00000478197 GRM8O00222 908 aa18.71■□□□□ 0.59
C2orf88-207ENST00000478197 GRAPQ13588 217 aa18.71■□□□□ 0.59
C2orf88-207ENST00000478197 MVPQ14764 893 aaKnown RBP18.71■□□□□ 0.59
C2orf88-207ENST00000478197 DPP8Q6V1X1 898 aaPredicted RBP18.71■□□□□ 0.59
C2orf88-207ENST00000478197 TMC4Q7Z404 712 aa18.71■□□□□ 0.59
C2orf88-207ENST00000478197 GRAPLQ8TC17 118 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms