RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 PDRG1Q9NUG6 133 aa10.68□□□□□ -0.7
CDHR3-211ENST00000478080 NSFL1CQ9UNZ2 370 aaKnown RBP10.68□□□□□ -0.7
CDHR3-211ENST00000478080 TJP1Q07157 1748 aa10.68□□□□□ -0.7
CDHR3-211ENST00000478080 SLC27A2O14975 620 aa10.68□□□□□ -0.7
CDHR3-211ENST00000478080 GPT2Q8TD30 523 aa10.68□□□□□ -0.7
CDHR3-211ENST00000478080 RBM27Q9P2N5 1060 aaKnown RBP10.68□□□□□ -0.7
CDHR3-211ENST00000478080 LIMCH1Q9UPQ0 1083 aa10.68□□□□□ -0.7
CDHR3-211ENST00000478080 HIP1O00291 1037 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 PTMSP20962 102 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 TCIRG1Q13488 830 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 HLFQ16534 295 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 GPTP24298 496 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 CCDC83Q8IWF9 413 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 KCNB2Q92953 911 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 ISCA1Q9BUE6 129 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 GDPD2Q9HCC8 539 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 ZSWIM6Q9HCJ5 1215 aa10.67□□□□□ -0.7
CDHR3-211ENST00000478080 A0A0G2JS52 829 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 ADAMTS2O95450 1211 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-211ENST00000478080 NECAB1Q8N987 351 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 CYP46A1Q9Y6A2 500 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 RPAP1Q9BWH6 1393 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-211ENST00000478080 MED23Q9ULK4 1368 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 TAF5LO75529 589 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 ZKSCAN1P17029 563 aaPredicted RBP10.66□□□□□ -0.7
CDHR3-211ENST00000478080 MRE11P49959 708 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 ST3GAL1Q11201 340 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 HAUS7Q99871 368 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 SNRKQ9NRH2 765 aa10.66□□□□□ -0.7
CDHR3-211ENST00000478080 EYA2O00167 538 aa10.65□□□□□ -0.7
CDHR3-211ENST00000478080 GOLIM4O00461 696 aa10.65□□□□□ -0.7
CDHR3-211ENST00000478080 ZNF609O15014 1411 aa10.65□□□□□ -0.7
CDHR3-211ENST00000478080 ITGB4P16144 1822 aa10.65□□□□□ -0.7
CDHR3-211ENST00000478080 ME3Q16798 604 aa10.65□□□□□ -0.7
CDHR3-211ENST00000478080 VPS53Q5VIR6 699 aa10.65□□□□□ -0.7
CDHR3-211ENST00000478080 EXOC5O00471 708 aa10.65□□□□□ -0.71
CDHR3-211ENST00000478080 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.71
CDHR3-211ENST00000478080 TPRNQ4KMQ1 711 aa10.65□□□□□ -0.71
CDHR3-211ENST00000478080 KIF6Q6ZMV9 814 aa10.65□□□□□ -0.71
CDHR3-211ENST00000478080 TPCN1Q9ULQ1 816 aa10.65□□□□□ -0.71
CDHR3-211ENST00000478080 A0A1B0GUL7 405 aa10.64□□□□□ -0.71
CDHR3-211ENST00000478080 STARD3NLO95772 234 aa10.64□□□□□ -0.71
CDHR3-211ENST00000478080 IL15P40933 162 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-211ENST00000478080 TM6SF1Q9BZW5 370 aa10.64□□□□□ -0.71
CDHR3-211ENST00000478080 ZBTB1Q9Y2K1 713 aa10.64□□□□□ -0.71
CDHR3-211ENST00000478080 ROBO1Q9Y6N7 1651 aa10.64□□□□□ -0.71
CDHR3-211ENST00000478080 DISP2A7MBM2 1401 aa10.64□□□□□ -0.71
CDHR3-211ENST00000478080 CYP19A1P11511 503 aaPredicted RBP10.64□□□□□ -0.71
CDHR3-211ENST00000478080 SYT1P21579 422 aa10.64□□□□□ -0.71
CDHR3-211ENST00000478080 CCDC57Q2TAC2 916 aa10.64□□□□□ -0.71
CDHR3-211ENST00000478080 ZSCAN23Q3MJ62 389 aa10.64□□□□□ -0.71
CDHR3-211ENST00000478080 ADORA1P30542 326 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 TMEM63CQ9P1W3 806 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 TBC1D2BQ9UPU7 963 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 SMC3Q9UQE7 1217 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 BCL9O00512 1426 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 MAP3K15Q6ZN16 1313 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 A0A0G2JLW4 131 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 GADD45BO75293 160 aaPredicted RBP10.63□□□□□ -0.71
CDHR3-211ENST00000478080 GJB2P29033 226 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 TEX13AQ9BXU3 409 aaPredicted RBP10.63□□□□□ -0.71
CDHR3-211ENST00000478080 PAG1Q9NWQ8 432 aa10.63□□□□□ -0.71
CDHR3-211ENST00000478080 WDR33Q9C0J8 1336 aaKnown RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 MCMDC2Q4G0Z9 681 aa10.62□□□□□ -0.71
CDHR3-211ENST00000478080 BLOC1S2Q6QNY1 142 aa10.62□□□□□ -0.71
CDHR3-211ENST00000478080 GIGYF2Q6Y7W6 1299 aaKnown RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 KBTBD3Q8NAB2 608 aa10.62□□□□□ -0.71
CDHR3-211ENST00000478080 ACSBG1Q96GR2 724 aa10.62□□□□□ -0.71
CDHR3-211ENST00000478080 COL16A1Q07092 1604 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 TCHHQ07283 1943 aa10.62□□□□□ -0.71
CDHR3-211ENST00000478080 NUTM2BA6NNL0 878 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 NUTM2EB1AL46 878 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 STX6O43752 255 aa10.62□□□□□ -0.71
CDHR3-211ENST00000478080 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 IFIT1P09914 478 aaKnown RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 STK3Q13188 491 aa10.62□□□□□ -0.71
CDHR3-211ENST00000478080 RNF20Q5VTR2 975 aa10.62□□□□□ -0.71
CDHR3-211ENST00000478080 NUTM2AQ8IVF1 878 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 ZBTB38Q8NAP3 1195 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 CEP126Q9P2H0 1117 aa10.62□□□□□ -0.71
CDHR3-211ENST00000478080 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-211ENST00000478080 COL14A1Q05707 1796 aaKnown RBP10.61□□□□□ -0.71
CDHR3-211ENST00000478080 RPS6KB1P23443 525 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 FKBP4Q02790 459 aaKnown RBP eCLIP10.61□□□□□ -0.71
CDHR3-211ENST00000478080 TOB2Q14106 344 aaPredicted RBP10.61□□□□□ -0.71
CDHR3-211ENST00000478080 USP48Q86UV5 1035 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 NLRP10Q86W26 655 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 CNPY2Q9Y2B0 182 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 JCADQ9P266 1359 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 CIAO1O76071 339 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 CYP21A2P08686 494 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 ZSCAN22P10073 491 aaPredicted RBP10.61□□□□□ -0.71
CDHR3-211ENST00000478080 PSMA5P28066 241 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 TRIM28Q13263 835 aaKnown RBP10.61□□□□□ -0.71
CDHR3-211ENST00000478080 SCARF1Q14162 830 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 TAF7LQ5H9L4 462 aa10.61□□□□□ -0.71
CDHR3-211ENST00000478080 USPL1Q5W0Q7 1092 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms