RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 NR6A1Q15406 480 aa6.51□□□□□ -1.37
SF3B6-202ENST00000478050 PNMA1Q8ND90 353 aa6.51□□□□□ -1.37
SF3B6-202ENST00000478050 LRRN4Q8WUT4 740 aa6.51□□□□□ -1.37
SF3B6-202ENST00000478050 LRRC4BQ9NT99 713 aa6.51□□□□□ -1.37
SF3B6-202ENST00000478050 RCAN3Q9UKA8 241 aa6.51□□□□□ -1.37
SF3B6-202ENST00000478050 SBNO2Q9Y2G9 1366 aa6.51□□□□□ -1.37
SF3B6-202ENST00000478050 PIK3C2BO00750 1634 aa6.5□□□□□ -1.37
SF3B6-202ENST00000478050 USP32Q8NFA0 1604 aa6.5□□□□□ -1.37
SF3B6-202ENST00000478050 ERVK-7P63135 1459 aa6.5□□□□□ -1.37
SF3B6-202ENST00000478050 FURINP09958 794 aa6.5□□□□□ -1.37
SF3B6-202ENST00000478050 ANKLE2Q86XL3 938 aa6.5□□□□□ -1.37
SF3B6-202ENST00000478050 CCDC125Q86Z20 511 aa6.5□□□□□ -1.37
SF3B6-202ENST00000478050 KDF1Q8NAX2 398 aaPredicted RBP6.5□□□□□ -1.37
SF3B6-202ENST00000478050 DYRK1BQ9Y463 629 aa6.5□□□□□ -1.37
SF3B6-202ENST00000478050 ABCC3O15438 1527 aa6.5□□□□□ -1.37
SF3B6-202ENST00000478050 SPATA31A6Q5VVP1 1343 aa6.5□□□□□ -1.37
SF3B6-202ENST00000478050 DIP2CQ9Y2E4 1556 aa6.49□□□□□ -1.37
SF3B6-202ENST00000478050 ZMYM3Q14202 1370 aa6.49□□□□□ -1.37
SF3B6-202ENST00000478050 MEN1O00255 615 aa6.49□□□□□ -1.37
SF3B6-202ENST00000478050 OIP5O43482 229 aa6.49□□□□□ -1.37
SF3B6-202ENST00000478050 PPP2R1AP30153 589 aa6.49□□□□□ -1.37
SF3B6-202ENST00000478050 WDR43Q15061 677 aaKnown RBP eCLIP6.49□□□□□ -1.37
SF3B6-202ENST00000478050 CYLDQ9NQC7 956 aa6.49□□□□□ -1.37
SF3B6-202ENST00000478050 MKL2Q9ULH7 1088 aa6.49□□□□□ -1.37
SF3B6-202ENST00000478050 ARHGEF28Q8N1W1 1705 aaKnown RBP6.49□□□□□ -1.37
SF3B6-202ENST00000478050 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 KRBA1A5PL33 1030 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 SLC27A3Q5K4L6 730 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 ALYREFQ86V81 257 aaKnown RBP6.48□□□□□ -1.37
SF3B6-202ENST00000478050 DDRGK1Q96HY6 314 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 ARID3AQ99856 593 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 OCSTAMPQ9BR26 566 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 OXCT2Q9BYC2 517 aaPredicted RBP6.48□□□□□ -1.37
SF3B6-202ENST00000478050 KRTAP9-9Q9BYP9 154 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 RRAGCQ9HB90 399 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 RGS12O14924 1447 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 NOS1P29475 1434 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 MYO5BQ9ULV0 1848 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 RPGRIP1LQ68CZ1 1315 aa6.48□□□□□ -1.37
SF3B6-202ENST00000478050 ATP5J2-PTCD1G3V325 749 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 GPC1P35052 558 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 MAP2K3P46734 347 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 RBM6P78332 1123 aaKnown RBP6.47□□□□□ -1.37
SF3B6-202ENST00000478050 POU4F2Q12837 409 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 CFAP70Q5T0N1 1121 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 PPP2R2DQ66LE6 453 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 NGLY1Q96IV0 654 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 NLRP3Q96P20 1036 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 NPHP4O75161 1426 aaPredicted RBP6.47□□□□□ -1.37
SF3B6-202ENST00000478050 ADGRB1O14514 1584 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 REREQ9P2R6 1566 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 ADGRF5Q8IZF2 1346 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 A2ML1A8K2U0 1454 aa6.47□□□□□ -1.37
SF3B6-202ENST00000478050 NEXMIFQ5QGS0 1516 aa6.46□□□□□ -1.37
SF3B6-202ENST00000478050 SHPRHQ149N8 1683 aa6.46□□□□□ -1.37
SF3B6-202ENST00000478050 C1QTNF8P60827 252 aa6.46□□□□□ -1.38
SF3B6-202ENST00000478050 SNRPNP63162 240 aaKnown RBP6.46□□□□□ -1.38
SF3B6-202ENST00000478050 ARHGAP31Q2M1Z3 1444 aa6.46□□□□□ -1.38
SF3B6-202ENST00000478050 NGEFQ8N5V2 710 aa6.46□□□□□ -1.38
SF3B6-202ENST00000478050 ANKRD26Q9UPS8 1709 aa6.46□□□□□ -1.38
SF3B6-202ENST00000478050 CENPJQ9HC77 1338 aaPredicted RBP6.46□□□□□ -1.38
SF3B6-202ENST00000478050 ESPNB1AK53 854 aa6.45□□□□□ -1.38
SF3B6-202ENST00000478050 TCERG1O14776 1098 aaKnown RBP6.45□□□□□ -1.38
SF3B6-202ENST00000478050 SEPT12Q8IYM1 358 aa6.45□□□□□ -1.38
SF3B6-202ENST00000478050 EXOC6Q8TAG9 804 aa6.45□□□□□ -1.38
SF3B6-202ENST00000478050 NUCKS1Q9H1E3 243 aaKnown RBP6.45□□□□□ -1.38
SF3B6-202ENST00000478050 C14orf93Q9H972 538 aaKnown RBP6.45□□□□□ -1.38
SF3B6-202ENST00000478050 ZNF521Q96K83 1311 aa6.45□□□□□ -1.38
SF3B6-202ENST00000478050 PLEKHH1Q9ULM0 1364 aa6.44□□□□□ -1.38
SF3B6-202ENST00000478050 VIRMAQ69YN4 1812 aaKnown RBP6.44□□□□□ -1.38
SF3B6-202ENST00000478050 A0A1W2PRU2 124 aa6.44□□□□□ -1.38
SF3B6-202ENST00000478050 GRIN2CQ14957 1233 aa6.44□□□□□ -1.38
SF3B6-202ENST00000478050 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.44□□□□□ -1.38
SF3B6-202ENST00000478050 PUS7Q96PZ0 661 aaKnown RBP6.44□□□□□ -1.38
SF3B6-202ENST00000478050 CLTCQ00610 1675 aaKnown RBP6.44□□□□□ -1.38
SF3B6-202ENST00000478050 AFF2P51816 1311 aa6.44□□□□□ -1.38
SF3B6-202ENST00000478050 POLR3AO14802 1390 aaPredicted RBP6.44□□□□□ -1.38
SF3B6-202ENST00000478050 LRP6O75581 1613 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 ZFYVE9O95405 1425 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 ROBO1Q9Y6N7 1651 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 AP1G2O75843 785 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 F11P03951 625 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 AMPD1P23109 780 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 ANP32AP39687 249 aaKnown RBP6.43□□□□□ -1.38
SF3B6-202ENST00000478050 NBPF10Q6P3W6 841 aaKnown RBP6.43□□□□□ -1.38
SF3B6-202ENST00000478050 THEMISQ8N1K5 641 aaPredicted RBP6.43□□□□□ -1.38
SF3B6-202ENST00000478050 NBPF15Q8N660 670 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 KRTAP4-12Q9BQ66 201 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 QTRT2Q9H974 415 aaKnown RBP6.43□□□□□ -1.38
SF3B6-202ENST00000478050 TIMMDC1Q9NPL8 285 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 PHF24Q9UPV7 400 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 TMEM131LA2VDJ0 1609 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 NHSL1Q5SYE7 1610 aa6.43□□□□□ -1.38
SF3B6-202ENST00000478050 NSD3Q9BZ95 1437 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 PHLPP1O60346 1717 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 NKTRP30414 1462 aaKnown RBP6.42□□□□□ -1.38
SF3B6-202ENST00000478050 TULP4Q9NRJ4 1543 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 KIF20BQ96Q89 1820 aa6.42□□□□□ -1.38
SF3B6-202ENST00000478050 SHISA8B8ZZ34 492 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms