RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 C21orf2O43822 256 aa8.3□□□□□ -1.08
NCKAP1-204ENST00000477988 STAG2Q8N3U4 1231 aa8.3□□□□□ -1.08
NCKAP1-204ENST00000477988 LARGE2Q8N3Y3 721 aa8.3□□□□□ -1.08
NCKAP1-204ENST00000477988 ZFATQ9P243 1243 aa8.3□□□□□ -1.08
NCKAP1-204ENST00000477988 JAG1P78504 1218 aa8.29□□□□□ -1.08
NCKAP1-204ENST00000477988 DHX32Q7L7V1 743 aaKnown RBP8.29□□□□□ -1.08
NCKAP1-204ENST00000477988 ZDHHC13Q8IUH4 622 aa8.29□□□□□ -1.08
NCKAP1-204ENST00000477988 PALM3A6NDB9 673 aaPredicted RBP8.28□□□□□ -1.08
NCKAP1-204ENST00000477988 PPP1R12BO60237 982 aaPredicted RBP8.28□□□□□ -1.08
NCKAP1-204ENST00000477988 GPLD1P80108 840 aa8.28□□□□□ -1.08
NCKAP1-204ENST00000477988 TGFBR3LH3BV60 316 aa8.27□□□□□ -1.09
NCKAP1-204ENST00000477988 CLDN10P78369 228 aa8.27□□□□□ -1.09
NCKAP1-204ENST00000477988 INTS5Q6P9B9 1019 aaKnown RBP8.27□□□□□ -1.09
NCKAP1-204ENST00000477988 GAS2L2Q8NHY3 880 aa8.27□□□□□ -1.09
NCKAP1-204ENST00000477988 C2orf49Q9BVC5 232 aaPredicted RBP8.27□□□□□ -1.09
NCKAP1-204ENST00000477988 SMG9Q9H0W8 520 aaKnown RBP8.27□□□□□ -1.09
NCKAP1-204ENST00000477988 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
NCKAP1-204ENST00000477988 USP17L3A6NCW0 530 aa8.26□□□□□ -1.09
NCKAP1-204ENST00000477988 USP17L4A6NCW7 530 aa8.26□□□□□ -1.09
NCKAP1-204ENST00000477988 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
NCKAP1-204ENST00000477988 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
NCKAP1-204ENST00000477988 DTX1Q86Y01 620 aa8.26□□□□□ -1.09
NCKAP1-204ENST00000477988 SIX5Q8N196 739 aa8.26□□□□□ -1.09
NCKAP1-204ENST00000477988 STOML1Q9UBI4 398 aa8.26□□□□□ -1.09
NCKAP1-204ENST00000477988 SLC24A1O60721 1099 aa8.25□□□□□ -1.09
NCKAP1-204ENST00000477988 MLLT1Q03111 559 aaPredicted RBP8.25□□□□□ -1.09
NCKAP1-204ENST00000477988 OGFOD1Q8N543 542 aa8.25□□□□□ -1.09
NCKAP1-204ENST00000477988 IFT43Q96FT9 208 aa8.25□□□□□ -1.09
NCKAP1-204ENST00000477988 UBL7Q96S82 380 aaPredicted RBP8.25□□□□□ -1.09
NCKAP1-204ENST00000477988 SRA1Q9HD15 236 aaKnown RBP8.25□□□□□ -1.09
NCKAP1-204ENST00000477988 C11orf16Q9NQ32 467 aa8.25□□□□□ -1.09
NCKAP1-204ENST00000477988 ADGRE2Q9UHX3 823 aa8.25□□□□□ -1.09
NCKAP1-204ENST00000477988 TSEN2Q8NCE0 465 aaKnown RBP8.24□□□□□ -1.09
NCKAP1-204ENST00000477988 RBM19Q9Y4C8 960 aaKnown RBP8.24□□□□□ -1.09
NCKAP1-204ENST00000477988 ATAD2Q6PL18 1390 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 PRR19A6NJB7 356 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 ATP9BO43861 1147 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 RAD21O60216 631 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 EPB42P16452 691 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 TARSP26639 723 aaKnown RBP8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 INPP5BP32019 993 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 GRIK1P39086 918 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 SETDB1Q15047 1291 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 RTN1Q16799 776 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 ARMC10Q8N2F6 343 aa8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 AGGF1Q8N302 714 aaeCLIP8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 MKRN1Q9UHC7 482 aaKnown RBP8.23□□□□□ -1.09
NCKAP1-204ENST00000477988 WNT11O96014 354 aa8.22□□□□□ -1.09
NCKAP1-204ENST00000477988 GLB1P16278 677 aa8.22□□□□□ -1.09
NCKAP1-204ENST00000477988 NRLP54845 237 aa8.22□□□□□ -1.09
NCKAP1-204ENST00000477988 NFIAQ12857 509 aa8.22□□□□□ -1.09
NCKAP1-204ENST00000477988 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.22□□□□□ -1.09
NCKAP1-204ENST00000477988 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
NCKAP1-204ENST00000477988 MAP4K3Q8IVH8 894 aa8.22□□□□□ -1.09
NCKAP1-204ENST00000477988 NGLY1Q96IV0 654 aa8.22□□□□□ -1.09
NCKAP1-204ENST00000477988 DHX15O43143 795 aaKnown RBP8.21□□□□□ -1.1
NCKAP1-204ENST00000477988 DKK1O94907 266 aa8.21□□□□□ -1.1
NCKAP1-204ENST00000477988 HFE2Q6ZVN8 426 aa8.21□□□□□ -1.1
NCKAP1-204ENST00000477988 DCAF11Q8TEB1 546 aa8.21□□□□□ -1.1
NCKAP1-204ENST00000477988 RARAP10276 462 aa8.2□□□□□ -1.1
NCKAP1-204ENST00000477988 TPRNQ4KMQ1 711 aa8.2□□□□□ -1.1
NCKAP1-204ENST00000477988 ADAMTS19Q8TE59 1207 aa8.2□□□□□ -1.1
NCKAP1-204ENST00000477988 UCN2Q96RP3 112 aa8.2□□□□□ -1.1
NCKAP1-204ENST00000477988 SASH3O75995 380 aa8.19□□□□□ -1.1
NCKAP1-204ENST00000477988 EIF2AK2P19525 551 aaKnown RBP8.19□□□□□ -1.1
NCKAP1-204ENST00000477988 IDH3AP50213 366 aa8.19□□□□□ -1.1
NCKAP1-204ENST00000477988 IL22RA1Q8N6P7 574 aa8.19□□□□□ -1.1
NCKAP1-204ENST00000477988 PLD4Q96BZ4 506 aa8.19□□□□□ -1.1
NCKAP1-204ENST00000477988 POM121Q96HA1 1249 aa8.19□□□□□ -1.1
NCKAP1-204ENST00000477988 HDGFL1Q5TGJ6 251 aa8.18□□□□□ -1.1
NCKAP1-204ENST00000477988 RNF43Q68DV7 783 aa8.18□□□□□ -1.1
NCKAP1-204ENST00000477988 SCG3Q8WXD2 468 aaKnown RBP8.18□□□□□ -1.1
NCKAP1-204ENST00000477988 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
NCKAP1-204ENST00000477988 TLR7Q9NYK1 1049 aaKnown RBP8.18□□□□□ -1.1
NCKAP1-204ENST00000477988 POM121CA8CG34 1229 aa8.17□□□□□ -1.1
NCKAP1-204ENST00000477988 ARID4AP29374 1257 aaPredicted RBP8.17□□□□□ -1.1
NCKAP1-204ENST00000477988 SEC13P55735 322 aa8.17□□□□□ -1.1
NCKAP1-204ENST00000477988 OGFOD2Q6N063 350 aa8.17□□□□□ -1.1
NCKAP1-204ENST00000477988 ZNF594Q96JF6 807 aaPredicted RBP8.17□□□□□ -1.1
NCKAP1-204ENST00000477988 DBNDD2Q9BQY9 259 aa8.17□□□□□ -1.1
NCKAP1-204ENST00000477988 UVSSAQ2YD98 709 aa8.16□□□□□ -1.1
NCKAP1-204ENST00000477988 GDF6Q6KF10 455 aaPredicted RBP8.16□□□□□ -1.1
NCKAP1-204ENST00000477988 TRIM42Q8IWZ5 723 aa8.16□□□□□ -1.1
NCKAP1-204ENST00000477988 LOC102724428A0A0B4J2F2 783 aa8.15□□□□□ -1.1
NCKAP1-204ENST00000477988 ARSDP51689 593 aa8.15□□□□□ -1.1
NCKAP1-204ENST00000477988 SIK1P57059 783 aa8.15□□□□□ -1.1
NCKAP1-204ENST00000477988 LCE4AQ5TA78 99 aa8.15□□□□□ -1.1
NCKAP1-204ENST00000477988 CHMP7Q8WUX9 453 aaPredicted RBP8.15□□□□□ -1.1
NCKAP1-204ENST00000477988 FAM46AQ96IP4 442 aaKnown RBP8.15□□□□□ -1.1
NCKAP1-204ENST00000477988 CEP41Q9BYV8 373 aa8.15□□□□□ -1.1
NCKAP1-204ENST00000477988 HMX2A2RU54 273 aa8.14□□□□□ -1.11
NCKAP1-204ENST00000477988 J3QW42 95 aa8.14□□□□□ -1.11
NCKAP1-204ENST00000477988 EGFRP00533 1210 aa8.14□□□□□ -1.11
NCKAP1-204ENST00000477988 RASA1P20936 1047 aa8.14□□□□□ -1.11
NCKAP1-204ENST00000477988 FLIIQ13045 1269 aa8.14□□□□□ -1.11
NCKAP1-204ENST00000477988 GALNT11Q8NCW6 608 aa8.14□□□□□ -1.11
NCKAP1-204ENST00000477988 WISP1O95388 367 aa8.13□□□□□ -1.11
NCKAP1-204ENST00000477988 C8AP07357 584 aa8.13□□□□□ -1.11
NCKAP1-204ENST00000477988 IGFBP4P22692 258 aa8.13□□□□□ -1.11
NCKAP1-204ENST00000477988 POU5F2Q8N7G0 328 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms