RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 ITGB7P26010 798 aa9.05□□□□□ -0.96
LMBR1-216ENST00000477983 TARSP26639 723 aaKnown RBP9.05□□□□□ -0.96
LMBR1-216ENST00000477983 OCLNQ16625 522 aa9.05□□□□□ -0.96
LMBR1-216ENST00000477983 COX20Q5RI15 118 aa9.05□□□□□ -0.96
LMBR1-216ENST00000477983 TTC9Q92623 222 aa9.05□□□□□ -0.96
LMBR1-216ENST00000477983 C9orf172C9J069 976 aa9.04□□□□□ -0.96
LMBR1-216ENST00000477983 RGS9O75916 674 aaPredicted RBP9.04□□□□□ -0.96
LMBR1-216ENST00000477983 SASH3O75995 380 aa9.04□□□□□ -0.96
LMBR1-216ENST00000477983 ELNP15502 786 aa9.04□□□□□ -0.96
LMBR1-216ENST00000477983 NKAPLQ5M9Q1 402 aa9.04□□□□□ -0.96
LMBR1-216ENST00000477983 DHX32Q7L7V1 743 aaKnown RBP9.04□□□□□ -0.96
LMBR1-216ENST00000477983 COL26A1Q96A83 441 aa9.04□□□□□ -0.96
LMBR1-216ENST00000477983 PRIMPOLQ96LW4 560 aa9.04□□□□□ -0.96
LMBR1-216ENST00000477983 RTCBQ9Y3I0 505 aaKnown RBP9.04□□□□□ -0.96
LMBR1-216ENST00000477983 ATG7O95352 703 aa9.03□□□□□ -0.96
LMBR1-216ENST00000477983 SELPP16109 830 aa9.03□□□□□ -0.96
LMBR1-216ENST00000477983 GPLD1P80108 840 aa9.03□□□□□ -0.96
LMBR1-216ENST00000477983 GRIK5Q16478 980 aa9.03□□□□□ -0.96
LMBR1-216ENST00000477983 RSPO4Q2I0M5 234 aaPredicted RBP9.03□□□□□ -0.96
LMBR1-216ENST00000477983 FAM35AQ86V20 835 aa9.03□□□□□ -0.96
LMBR1-216ENST00000477983 TREML1Q86YW5 311 aa9.03□□□□□ -0.96
LMBR1-216ENST00000477983 LPIN3Q9BQK8 851 aa9.03□□□□□ -0.96
LMBR1-216ENST00000477983 KRTAP4-8Q9BYQ9 185 aa9.03□□□□□ -0.96
LMBR1-216ENST00000477983 SEMA6BQ9H3T3 888 aa9.03□□□□□ -0.96
LMBR1-216ENST00000477983 RARAP10276 462 aa9.02□□□□□ -0.97
LMBR1-216ENST00000477983 ADGRE1Q14246 886 aa9.02□□□□□ -0.97
LMBR1-216ENST00000477983 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
LMBR1-216ENST00000477983 Q8N3U1 123 aa9.02□□□□□ -0.97
LMBR1-216ENST00000477983 LENG1Q96BZ8 264 aaPredicted RBP9.02□□□□□ -0.97
LMBR1-216ENST00000477983 ZMYND15Q9H091 742 aa9.02□□□□□ -0.97
LMBR1-216ENST00000477983 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.97
LMBR1-216ENST00000477983 RAC1P63000 192 aa9.01□□□□□ -0.97
LMBR1-216ENST00000477983 PERM1Q5SV97 790 aa9.01□□□□□ -0.97
LMBR1-216ENST00000477983 MSL1Q68DK7 614 aa9.01□□□□□ -0.97
LMBR1-216ENST00000477983 KCNMB2Q9Y691 235 aa9.01□□□□□ -0.97
LMBR1-216ENST00000477983 PRMT3O60678 531 aa9□□□□□ -0.97
LMBR1-216ENST00000477983 CPB1P15086 417 aa9□□□□□ -0.97
LMBR1-216ENST00000477983 NRLP54845 237 aa9□□□□□ -0.97
LMBR1-216ENST00000477983 DMRTC2Q8IXT2 367 aaPredicted RBP9□□□□□ -0.97
LMBR1-216ENST00000477983 FMR1NBQ8N0W7 255 aaPredicted RBP9□□□□□ -0.97
LMBR1-216ENST00000477983 DTWD1Q8N5C7 304 aa9□□□□□ -0.97
LMBR1-216ENST00000477983 STK32AQ8WU08 396 aa9□□□□□ -0.97
LMBR1-216ENST00000477983 TLR7Q9NYK1 1049 aaKnown RBP9□□□□□ -0.97
LMBR1-216ENST00000477983 USP20Q9Y2K6 914 aa9□□□□□ -0.97
LMBR1-216ENST00000477983 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.99□□□□□ -0.97
LMBR1-216ENST00000477983 XYLBO75191 536 aa8.99□□□□□ -0.97
LMBR1-216ENST00000477983 BRD2P25440 801 aaKnown RBP8.99□□□□□ -0.97
LMBR1-216ENST00000477983 ARID4AP29374 1257 aaPredicted RBP8.99□□□□□ -0.97
LMBR1-216ENST00000477983 NRG1Q02297 640 aaPredicted RBP8.99□□□□□ -0.97
LMBR1-216ENST00000477983 C16orf46Q6P387 395 aa8.99□□□□□ -0.97
LMBR1-216ENST00000477983 ETFBKMTQ8IXQ9 262 aa8.99□□□□□ -0.97
LMBR1-216ENST00000477983 SAP130Q9H0E3 1048 aa8.99□□□□□ -0.97
LMBR1-216ENST00000477983 CXXC1Q9P0U4 656 aaPredicted RBP8.99□□□□□ -0.97
LMBR1-216ENST00000477983 HOXD8P13378 290 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-216ENST00000477983 MBTPS1Q14703 1052 aa8.98□□□□□ -0.97
LMBR1-216ENST00000477983 ELMSAN1Q6PJG2 1045 aa8.98□□□□□ -0.97
LMBR1-216ENST00000477983 RGL4Q8IZJ4 473 aa8.98□□□□□ -0.97
LMBR1-216ENST00000477983 CMTR1Q8N1G2 835 aaKnown RBP8.98□□□□□ -0.97
LMBR1-216ENST00000477983 PLAURQ03405 335 aa8.97□□□□□ -0.97
LMBR1-216ENST00000477983 MLLT1Q03111 559 aaPredicted RBP8.96□□□□□ -0.98
LMBR1-216ENST00000477983 TMEM164Q5U3C3 297 aa8.96□□□□□ -0.98
LMBR1-216ENST00000477983 SHISA2Q6UWI4 295 aa8.96□□□□□ -0.98
LMBR1-216ENST00000477983 TXNRD3Q86VQ6 643 aa8.96□□□□□ -0.98
LMBR1-216ENST00000477983 FBXO11Q86XK2 927 aa8.96□□□□□ -0.98
LMBR1-216ENST00000477983 CLP1Q92989 425 aaKnown RBP8.96□□□□□ -0.98
LMBR1-216ENST00000477983 LOC102724428A0A0B4J2F2 783 aa8.95□□□□□ -0.98
LMBR1-216ENST00000477983 TNFRSF10BO14763 440 aa8.95□□□□□ -0.98
LMBR1-216ENST00000477983 DYRK3O43781 588 aa8.95□□□□□ -0.98
LMBR1-216ENST00000477983 MMP20O60882 483 aa8.95□□□□□ -0.98
LMBR1-216ENST00000477983 PTCD1O75127 700 aaKnown RBP8.95□□□□□ -0.98
LMBR1-216ENST00000477983 SOX18P35713 384 aa8.95□□□□□ -0.98
LMBR1-216ENST00000477983 SIK1P57059 783 aa8.95□□□□□ -0.98
LMBR1-216ENST00000477983 FAM26DQ5JW98 314 aa8.95□□□□□ -0.98
LMBR1-216ENST00000477983 CAPN12Q6ZSI9 719 aa8.95□□□□□ -0.98
LMBR1-216ENST00000477983 PSAPP07602 524 aa8.94□□□□□ -0.98
LMBR1-216ENST00000477983 HFE2Q6ZVN8 426 aa8.94□□□□□ -0.98
LMBR1-216ENST00000477983 WFDC8Q8IUA0 241 aa8.94□□□□□ -0.98
LMBR1-216ENST00000477983 PBXIP1Q96AQ6 731 aa8.94□□□□□ -0.98
LMBR1-216ENST00000477983 SMG9Q9H0W8 520 aaKnown RBP8.94□□□□□ -0.98
LMBR1-216ENST00000477983 H2AFB1P0C5Y9 115 aa8.93□□□□□ -0.98
LMBR1-216ENST00000477983 H2AFB2P0C5Z0 115 aa8.93□□□□□ -0.98
LMBR1-216ENST00000477983 NLRP13Q86W25 1043 aa8.93□□□□□ -0.98
LMBR1-216ENST00000477983 PSMG3-AS1Q96PY0 264 aa8.93□□□□□ -0.98
LMBR1-216ENST00000477983 SSBP4Q9BWG4 385 aaPredicted RBP8.93□□□□□ -0.98
LMBR1-216ENST00000477983 FAM13BQ9NYF5 915 aa8.93□□□□□ -0.98
LMBR1-216ENST00000477983 SERPINA10Q9UK55 444 aa8.93□□□□□ -0.98
LMBR1-216ENST00000477983 J3QW42 95 aa8.92□□□□□ -0.98
LMBR1-216ENST00000477983 TRIP4Q15650 581 aaPredicted RBP8.92□□□□□ -0.98
LMBR1-216ENST00000477983 IGF2-ASQ6U949 168 aa8.91□□□□□ -0.98
LMBR1-216ENST00000477983 PIK3R5Q8WYR1 880 aa8.91□□□□□ -0.98
LMBR1-216ENST00000477983 PLD4Q96BZ4 506 aa8.91□□□□□ -0.98
LMBR1-216ENST00000477983 SLAIN2Q9P270 581 aa8.91□□□□□ -0.98
LMBR1-216ENST00000477983 DEAF1O75398 565 aaPredicted RBP8.9□□□□□ -0.98
LMBR1-216ENST00000477983 EIF2AK2P19525 551 aaKnown RBP8.9□□□□□ -0.98
LMBR1-216ENST00000477983 NAA30Q147X3 362 aaPredicted RBP8.9□□□□□ -0.98
LMBR1-216ENST00000477983 MKNK1Q9BUB5 465 aa8.9□□□□□ -0.98
LMBR1-216ENST00000477983 STIM2Q9P246 746 aa8.9□□□□□ -0.98
LMBR1-216ENST00000477983 USP21Q9UK80 565 aa8.9□□□□□ -0.98
LMBR1-216ENST00000477983 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.89□□□□□ -0.99
LMBR1-216ENST00000477983 GHRHP01286 108 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms