RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 LRP10Q7Z4F1 713 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 FAM9BQ8IZU0 186 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 CNKSR1Q969H4 720 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 MASTLQ96GX5 879 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 NYXQ9GZU5 481 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
ERCC8-205ENST00000477893 NUP98P52948 1817 aa10.74□□□□□ -0.69
ERCC8-205ENST00000477893 TCERG1O14776 1098 aaKnown RBP10.74□□□□□ -0.69
ERCC8-205ENST00000477893 NPR1P16066 1061 aa10.74□□□□□ -0.69
ERCC8-205ENST00000477893 DOK7Q18PE1 504 aa10.74□□□□□ -0.69
ERCC8-205ENST00000477893 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
ERCC8-205ENST00000477893 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
ERCC8-205ENST00000477893 NMRK2Q9NPI5 230 aa10.74□□□□□ -0.69
ERCC8-205ENST00000477893 DDX21Q9NR30 783 aaKnown RBP eCLIP10.74□□□□□ -0.69
ERCC8-205ENST00000477893 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
ERCC8-205ENST00000477893 RGL2O15211 777 aa10.73□□□□□ -0.69
ERCC8-205ENST00000477893 NTSR2O95665 410 aa10.73□□□□□ -0.69
ERCC8-205ENST00000477893 ZNF853P0CG23 659 aa10.73□□□□□ -0.69
ERCC8-205ENST00000477893 LMNB1P20700 586 aa10.73□□□□□ -0.69
ERCC8-205ENST00000477893 SLC51AQ86UW1 340 aa10.73□□□□□ -0.69
ERCC8-205ENST00000477893 ZNF34Q8IZ26 560 aa10.73□□□□□ -0.69
ERCC8-205ENST00000477893 C8orf58Q8NAV2 365 aa10.73□□□□□ -0.69
ERCC8-205ENST00000477893 RPGRQ92834 1020 aaKnown RBP10.73□□□□□ -0.69
ERCC8-205ENST00000477893 TIAM2Q8IVF5 1701 aa10.72□□□□□ -0.69
ERCC8-205ENST00000477893 SLX4Q8IY92 1834 aa10.72□□□□□ -0.69
ERCC8-205ENST00000477893 PPP1R42Q7Z4L9 355 aa10.72□□□□□ -0.69
ERCC8-205ENST00000477893 UTP14AQ9BVJ6 771 aaKnown RBP10.72□□□□□ -0.69
ERCC8-205ENST00000477893 TAOK3Q9H2K8 898 aa10.72□□□□□ -0.69
ERCC8-205ENST00000477893 DBF4Q9UBU7 674 aaPredicted RBP10.72□□□□□ -0.69
ERCC8-205ENST00000477893 ATP5J2-PTCD1G3V325 749 aa10.71□□□□□ -0.69
ERCC8-205ENST00000477893 KIF3CO14782 793 aa10.71□□□□□ -0.69
ERCC8-205ENST00000477893 HOXB7P09629 217 aa10.71□□□□□ -0.69
ERCC8-205ENST00000477893 HCLS1P14317 486 aaPredicted RBP10.71□□□□□ -0.69
ERCC8-205ENST00000477893 PDAP1Q13442 181 aaKnown RBP10.71□□□□□ -0.69
ERCC8-205ENST00000477893 PARP10Q53GL7 1025 aa10.71□□□□□ -0.69
ERCC8-205ENST00000477893 CCDC93Q567U6 631 aa10.71□□□□□ -0.69
ERCC8-205ENST00000477893 RTL5Q5HYW3 569 aaPredicted RBP10.71□□□□□ -0.69
ERCC8-205ENST00000477893 WWC1Q8IX03 1113 aa10.71□□□□□ -0.69
ERCC8-205ENST00000477893 SYNE4Q8N205 404 aa10.71□□□□□ -0.69
ERCC8-205ENST00000477893 TSPYL6Q8N831 410 aa10.71□□□□□ -0.69
ERCC8-205ENST00000477893 TRMT112Q9UI30 125 aaKnown RBP10.71□□□□□ -0.69
ERCC8-205ENST00000477893 IBTKQ9P2D0 1353 aaPredicted RBP10.7□□□□□ -0.7
ERCC8-205ENST00000477893 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
ERCC8-205ENST00000477893 HSP90AB3PQ58FF7 597 aa10.7□□□□□ -0.7
ERCC8-205ENST00000477893 NLRP10Q86W26 655 aa10.7□□□□□ -0.7
ERCC8-205ENST00000477893 C16orf71Q8IYS4 520 aaPredicted RBP10.7□□□□□ -0.7
ERCC8-205ENST00000477893 PHAXQ9H814 394 aaKnown RBP10.7□□□□□ -0.7
ERCC8-205ENST00000477893 RRAGCQ9HB90 399 aa10.7□□□□□ -0.7
ERCC8-205ENST00000477893 ZNF277Q9NRM2 450 aaPredicted RBP10.7□□□□□ -0.7
ERCC8-205ENST00000477893 HYPKQ9NX55 129 aa10.7□□□□□ -0.7
ERCC8-205ENST00000477893 ANKRD36CQ5JPF3 1778 aa10.7□□□□□ -0.7
ERCC8-205ENST00000477893 ARFGEF2Q9Y6D5 1785 aa10.7□□□□□ -0.7
ERCC8-205ENST00000477893 KLRG2A4D1S0 409 aaPredicted RBP10.69□□□□□ -0.7
ERCC8-205ENST00000477893 TCIRG1Q13488 830 aa10.69□□□□□ -0.7
ERCC8-205ENST00000477893 SOGA3Q5TF21 947 aa10.69□□□□□ -0.7
ERCC8-205ENST00000477893 ANKRD13DQ6ZTN6 518 aa10.69□□□□□ -0.7
ERCC8-205ENST00000477893 RIC3Q7Z5B4 369 aa10.69□□□□□ -0.7
ERCC8-205ENST00000477893 PLBD2Q8NHP8 589 aa10.69□□□□□ -0.7
ERCC8-205ENST00000477893 RBM17Q96I25 401 aaKnown RBP10.69□□□□□ -0.7
ERCC8-205ENST00000477893 FBXO3Q9UK99 471 aa10.69□□□□□ -0.7
ERCC8-205ENST00000477893 SBF1O95248 1867 aa10.69□□□□□ -0.7
ERCC8-205ENST00000477893 FANCIQ9NVI1 1328 aa10.68□□□□□ -0.7
ERCC8-205ENST00000477893 PPEF1O14829 653 aaPredicted RBP10.68□□□□□ -0.7
ERCC8-205ENST00000477893 ALDH1B1P30837 517 aa10.68□□□□□ -0.7
ERCC8-205ENST00000477893 CRY2Q49AN0 593 aa10.68□□□□□ -0.7
ERCC8-205ENST00000477893 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
ERCC8-205ENST00000477893 MYD88Q99836 296 aa10.68□□□□□ -0.7
ERCC8-205ENST00000477893 FER1L6Q2WGJ9 1857 aa10.68□□□□□ -0.7
ERCC8-205ENST00000477893 ABCC4O15439 1325 aa10.67□□□□□ -0.7
ERCC8-205ENST00000477893 SH3TC1Q8TE82 1336 aa10.67□□□□□ -0.7
ERCC8-205ENST00000477893 FKBP4Q02790 459 aaKnown RBP eCLIP10.67□□□□□ -0.7
ERCC8-205ENST00000477893 CCDC27Q2M243 656 aa10.67□□□□□ -0.7
ERCC8-205ENST00000477893 TWISTNBQ3B726 338 aaPredicted RBP10.67□□□□□ -0.7
ERCC8-205ENST00000477893 CCDC30Q5VVM6 783 aa10.67□□□□□ -0.7
ERCC8-205ENST00000477893 C7orf43Q8WVR3 580 aa10.67□□□□□ -0.7
ERCC8-205ENST00000477893 JARID2Q92833 1246 aaPredicted RBP10.67□□□□□ -0.7
ERCC8-205ENST00000477893 FAM89AQ96GI7 184 aa10.67□□□□□ -0.7
ERCC8-205ENST00000477893 RIC1Q4ADV7 1423 aa10.67□□□□□ -0.7
ERCC8-205ENST00000477893 CCDC88AQ3V6T2 1871 aa10.66□□□□□ -0.7
ERCC8-205ENST00000477893 LTBP3Q9NS15 1303 aa10.66□□□□□ -0.7
ERCC8-205ENST00000477893 RIMBP2O15034 1052 aa10.66□□□□□ -0.7
ERCC8-205ENST00000477893 STK31Q9BXU1 1019 aa10.66□□□□□ -0.7
ERCC8-205ENST00000477893 ZNF541Q9H0D2 1346 aa10.65□□□□□ -0.7
ERCC8-205ENST00000477893 ZC3H4Q9UPT8 1303 aaKnown RBP10.65□□□□□ -0.7
ERCC8-205ENST00000477893 GLTPD2A6NH11 291 aa10.65□□□□□ -0.7
ERCC8-205ENST00000477893 HOXA10P31260 410 aaPredicted RBP10.65□□□□□ -0.7
ERCC8-205ENST00000477893 DDX46Q7L014 1031 aaKnown RBP10.65□□□□□ -0.7
ERCC8-205ENST00000477893 RTKN2Q8IZC4 609 aa10.65□□□□□ -0.7
ERCC8-205ENST00000477893 ISCA1Q9BUE6 129 aa10.65□□□□□ -0.7
ERCC8-205ENST00000477893 MAP3K2Q9Y2U5 619 aa10.65□□□□□ -0.7
ERCC8-205ENST00000477893 IL16Q14005 1332 aa10.64□□□□□ -0.71
ERCC8-205ENST00000477893 RNF123Q5XPI4 1314 aa10.64□□□□□ -0.71
ERCC8-205ENST00000477893 TOMM70O94826 608 aa10.64□□□□□ -0.71
ERCC8-205ENST00000477893 DDNO94850 711 aaPredicted RBP10.64□□□□□ -0.71
ERCC8-205ENST00000477893 DDX58O95786 925 aaKnown RBP10.64□□□□□ -0.71
ERCC8-205ENST00000477893 IARSP41252 1262 aaKnown RBP10.64□□□□□ -0.71
ERCC8-205ENST00000477893 EXOSC9Q06265 439 aaKnown RBP10.64□□□□□ -0.71
ERCC8-205ENST00000477893 SLC10A5Q5PT55 438 aa10.64□□□□□ -0.71
ERCC8-205ENST00000477893 G2E3Q7L622 706 aa10.64□□□□□ -0.71
ERCC8-205ENST00000477893 CCDC85AQ96PX6 553 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms