RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
SMNDC1-205ENST00000477763 RAB44Q7Z6P3 723 aaPredicted RBP8.29□□□□□ -1.08
SMNDC1-205ENST00000477763 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
SMNDC1-205ENST00000477763 GALNT6Q8NCL4 622 aa8.29□□□□□ -1.08
SMNDC1-205ENST00000477763 GPR152Q8TDT2 470 aa8.29□□□□□ -1.08
SMNDC1-205ENST00000477763 TUT1Q9H6E5 874 aaKnown RBP8.29□□□□□ -1.08
SMNDC1-205ENST00000477763 ANO2Q9NQ90 1003 aa8.29□□□□□ -1.08
SMNDC1-205ENST00000477763 USP20Q9Y2K6 914 aa8.29□□□□□ -1.08
SMNDC1-205ENST00000477763 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 ELOA3DA6NLF2 546 aaPredicted RBP8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 PCSK2P16519 638 aa8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 NFKB1P19838 968 aa8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 TRIP4Q15650 581 aaPredicted RBP8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 ECM1Q16610 540 aa8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 ELOA3BQ3SY89 546 aa8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 ATCAYQ86WG3 371 aa8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 ELOA3Q8NG57 546 aa8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 SCARF2Q96GP6 870 aaPredicted RBP8.28□□□□□ -1.08
SMNDC1-205ENST00000477763 UBAP1LF5GYI3 381 aa8.27□□□□□ -1.09
SMNDC1-205ENST00000477763 PDGFAP04085 211 aa8.27□□□□□ -1.09
SMNDC1-205ENST00000477763 USP5P45974 858 aa8.27□□□□□ -1.09
SMNDC1-205ENST00000477763 PCSK7Q16549 785 aa8.27□□□□□ -1.09
SMNDC1-205ENST00000477763 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
SMNDC1-205ENST00000477763 NLRP13Q86W25 1043 aa8.27□□□□□ -1.09
SMNDC1-205ENST00000477763 EDEM1Q92611 657 aa8.27□□□□□ -1.09
SMNDC1-205ENST00000477763 NUDT16Q96DE0 195 aaKnown RBP8.27□□□□□ -1.09
SMNDC1-205ENST00000477763 ZFATQ9P243 1243 aa8.27□□□□□ -1.09
SMNDC1-205ENST00000477763 SOWAHDA6NJG2 315 aa8.26□□□□□ -1.09
SMNDC1-205ENST00000477763 SHISA8B8ZZ34 492 aa8.26□□□□□ -1.09
SMNDC1-205ENST00000477763 FZD6O60353 706 aa8.26□□□□□ -1.09
SMNDC1-205ENST00000477763 SASH3O75995 380 aa8.26□□□□□ -1.09
SMNDC1-205ENST00000477763 RARAP10276 462 aa8.26□□□□□ -1.09
SMNDC1-205ENST00000477763 TARSP26639 723 aaKnown RBP8.26□□□□□ -1.09
SMNDC1-205ENST00000477763 PDE12Q6L8Q7 609 aaKnown RBP8.26□□□□□ -1.09
SMNDC1-205ENST00000477763 GPAT2Q6NUI2 795 aa8.26□□□□□ -1.09
SMNDC1-205ENST00000477763 HOXD8P13378 290 aaPredicted RBP8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 ALAS2P22557 587 aa8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 ADH7P40394 386 aa8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 ARHGAP4P98171 946 aa8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 DNM1Q05193 864 aaKnown RBP8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 AAMPQ13685 434 aa8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 XKR5Q6UX68 686 aa8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 NEDD1Q8NHV4 660 aa8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 BTBD6Q96KE9 485 aa8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 CNTNAP5Q8WYK1 1306 aa8.25□□□□□ -1.09
SMNDC1-205ENST00000477763 SOX18P35713 384 aa8.24□□□□□ -1.09
SMNDC1-205ENST00000477763 EHHADHQ08426 723 aa8.24□□□□□ -1.09
SMNDC1-205ENST00000477763 DHX32Q7L7V1 743 aaKnown RBP8.24□□□□□ -1.09
SMNDC1-205ENST00000477763 KRT25Q7Z3Z0 450 aa8.24□□□□□ -1.09
SMNDC1-205ENST00000477763 UBE2OQ9C0C9 1292 aaKnown RBP8.24□□□□□ -1.09
SMNDC1-205ENST00000477763 TLR7Q9NYK1 1049 aaKnown RBP8.24□□□□□ -1.09
SMNDC1-205ENST00000477763 POLIQ9UNA4 740 aa8.24□□□□□ -1.09
SMNDC1-205ENST00000477763 IVNS1ABPQ9Y6Y0 642 aa8.24□□□□□ -1.09
SMNDC1-205ENST00000477763 NRLP54845 237 aa8.23□□□□□ -1.09
SMNDC1-205ENST00000477763 GPLD1P80108 840 aa8.23□□□□□ -1.09
SMNDC1-205ENST00000477763 CHSY3Q70JA7 882 aa8.23□□□□□ -1.09
SMNDC1-205ENST00000477763 TTC16Q8NEE8 873 aa8.23□□□□□ -1.09
SMNDC1-205ENST00000477763 TRPM4Q8TD43 1214 aa8.23□□□□□ -1.09
SMNDC1-205ENST00000477763 DNAJB12Q9NXW2 375 aaKnown RBP8.23□□□□□ -1.09
SMNDC1-205ENST00000477763 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
SMNDC1-205ENST00000477763 MMP20O60882 483 aa8.22□□□□□ -1.09
SMNDC1-205ENST00000477763 PSAPP07602 524 aa8.22□□□□□ -1.09
SMNDC1-205ENST00000477763 AMPD1P23109 780 aa8.22□□□□□ -1.09
SMNDC1-205ENST00000477763 GJD3Q8N144 294 aa8.22□□□□□ -1.09
SMNDC1-205ENST00000477763 CITED4Q96RK1 184 aa8.22□□□□□ -1.09
SMNDC1-205ENST00000477763 ELP3Q9H9T3 547 aa8.22□□□□□ -1.09
SMNDC1-205ENST00000477763 CCDC87Q9NVE4 849 aa8.22□□□□□ -1.09
SMNDC1-205ENST00000477763 SLC6A14Q9UN76 642 aa8.22□□□□□ -1.09
SMNDC1-205ENST00000477763 NDUFB5O43674 189 aa8.21□□□□□ -1.1
SMNDC1-205ENST00000477763 IGHA1P01876 353 aa8.21□□□□□ -1.1
SMNDC1-205ENST00000477763 ITGB2P05107 769 aa8.21□□□□□ -1.1
SMNDC1-205ENST00000477763 PLAURQ03405 335 aa8.21□□□□□ -1.1
SMNDC1-205ENST00000477763 ZNF438Q7Z4V0 828 aa8.21□□□□□ -1.1
SMNDC1-205ENST00000477763 OR13H1Q8NG92 308 aa8.21□□□□□ -1.1
SMNDC1-205ENST00000477763 GGNBP2Q9H3C7 697 aa8.21□□□□□ -1.1
SMNDC1-205ENST00000477763 ABI2Q9NYB9 513 aaPredicted RBP8.21□□□□□ -1.1
SMNDC1-205ENST00000477763 BRPF3Q9ULD4 1205 aa8.21□□□□□ -1.1
SMNDC1-205ENST00000477763 HOXB4P17483 251 aaPredicted RBP8.2□□□□□ -1.1
SMNDC1-205ENST00000477763 TTC39BQ5VTQ0 682 aaPredicted RBP8.2□□□□□ -1.1
SMNDC1-205ENST00000477763 DCAF5Q96JK2 942 aa8.2□□□□□ -1.1
SMNDC1-205ENST00000477763 IGFLR1Q9H665 355 aa8.2□□□□□ -1.1
SMNDC1-205ENST00000477763 PRDM6Q9NQX0 595 aa8.2□□□□□ -1.1
SMNDC1-205ENST00000477763 DGKGP49619 791 aa8.19□□□□□ -1.1
SMNDC1-205ENST00000477763 TBC1D8BQ0IIM8 1120 aa8.19□□□□□ -1.1
SMNDC1-205ENST00000477763 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
SMNDC1-205ENST00000477763 PODNQ7Z5L7 613 aa8.19□□□□□ -1.1
SMNDC1-205ENST00000477763 BEND7Q8N7W2 519 aaPredicted RBP8.19□□□□□ -1.1
SMNDC1-205ENST00000477763 GZF1Q9H116 711 aaPredicted RBP8.19□□□□□ -1.1
SMNDC1-205ENST00000477763 STARD13Q9Y3M8 1113 aa8.19□□□□□ -1.1
SMNDC1-205ENST00000477763 ZBTB42B2RXF5 422 aa8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 PIK3R2O00459 728 aa8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 PLA2G4EQ3MJ16 856 aa8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 C20orf204Q6ZNR8 217 aa8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 RRAGCQ9HB90 399 aa8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 FRRS1LQ9P0K9 344 aa8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 TMEM63CQ9P1W3 806 aa8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 BIN2Q9UBW5 565 aaPredicted RBP8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 MKL2Q9ULH7 1088 aa8.18□□□□□ -1.1
SMNDC1-205ENST00000477763 FAM35AQ86V20 835 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms