RNA–Protein interactions for RNA: ENST00000477703.5

SMIM4-203, Transcript of small integral membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM4, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-203ENST00000477703 COL5A3P25940 1745 aaPredicted RBP23.39■■□□□ 1.33
SMIM4-203ENST00000477703 SNRKQ9NRH2 765 aa23.38■■□□□ 1.33
SMIM4-203ENST00000477703 FBXO3Q9UK99 471 aa23.38■■□□□ 1.33
SMIM4-203ENST00000477703 HIP1O00291 1037 aa23.37■■□□□ 1.33
SMIM4-203ENST00000477703 TIMM10P62072 90 aa23.37■■□□□ 1.33
SMIM4-203ENST00000477703 TTLL11Q8NHH1 800 aa23.37■■□□□ 1.33
SMIM4-203ENST00000477703 EDC3Q96F86 508 aaKnown RBP23.37■■□□□ 1.33
SMIM4-203ENST00000477703 NEK4P51957 841 aa23.37■■□□□ 1.33
SMIM4-203ENST00000477703 FAM227BQ96M60 508 aa23.37■■□□□ 1.33
SMIM4-203ENST00000477703 TRMT112Q9UI30 125 aaKnown RBP23.37■■□□□ 1.33
SMIM4-203ENST00000477703 CIZ1Q9ULV3 898 aaPredicted RBP23.37■■□□□ 1.33
SMIM4-203ENST00000477703 THSD7AQ9UPZ6 1657 aa23.36■■□□□ 1.33
SMIM4-203ENST00000477703 PTH1RQ03431 593 aa23.36■■□□□ 1.33
SMIM4-203ENST00000477703 NMIQ13287 307 aaPredicted RBP23.36■■□□□ 1.33
SMIM4-203ENST00000477703 CCDC85AQ96PX6 553 aaPredicted RBP23.36■■□□□ 1.33
SMIM4-203ENST00000477703 HAUS7Q99871 368 aa23.36■■□□□ 1.33
SMIM4-203ENST00000477703 FOXD4L1Q9NU39 408 aa23.36■■□□□ 1.33
SMIM4-203ENST00000477703 IRS4O14654 1257 aaPredicted RBP23.35■■□□□ 1.33
SMIM4-203ENST00000477703 CAMTA2O94983 1202 aa23.35■■□□□ 1.33
SMIM4-203ENST00000477703 MYT1Q01538 1121 aa23.35■■□□□ 1.33
SMIM4-203ENST00000477703 KIAA1211Q6ZU35 1233 aa23.35■■□□□ 1.33
SMIM4-203ENST00000477703 ZNF609O15014 1411 aa23.35■■□□□ 1.33
SMIM4-203ENST00000477703 IFIT5Q13325 482 aaKnown RBP23.35■■□□□ 1.33
SMIM4-203ENST00000477703 PTF1AQ7RTS3 328 aa23.35■■□□□ 1.33
SMIM4-203ENST00000477703 NEUROD6Q96NK8 337 aa23.35■■□□□ 1.33
SMIM4-203ENST00000477703 FSD1Q9BTV5 496 aa23.35■■□□□ 1.33
SMIM4-203ENST00000477703 CTSWP56202 376 aa23.34■■□□□ 1.33
SMIM4-203ENST00000477703 RASEFQ8IZ41 740 aa23.34■■□□□ 1.33
SMIM4-203ENST00000477703 SNX14Q9Y5W7 946 aa23.34■■□□□ 1.33
SMIM4-203ENST00000477703 NDUFB9Q9Y6M9 179 aa23.34■■□□□ 1.33
SMIM4-203ENST00000477703 HSP90AA1P07900 732 aaKnown RBP23.33■■□□□ 1.33
SMIM4-203ENST00000477703 KCNB2Q92953 911 aa23.33■■□□□ 1.33
SMIM4-203ENST00000477703 GREM2Q9H772 168 aa23.33■■□□□ 1.33
SMIM4-203ENST00000477703 CEP126Q9P2H0 1117 aa23.33■■□□□ 1.33
SMIM4-203ENST00000477703 A0A0D9SFI3 127 aa23.32■■□□□ 1.32
SMIM4-203ENST00000477703 A0A1B0GUL7 405 aa23.32■■□□□ 1.32
SMIM4-203ENST00000477703 PDE8AO60658 829 aa23.32■■□□□ 1.32
SMIM4-203ENST00000477703 SUSD4Q5VX71 490 aa23.32■■□□□ 1.32
SMIM4-203ENST00000477703 ITGA6P23229 1130 aa23.32■■□□□ 1.32
SMIM4-203ENST00000477703 LINC00116Q8NCU8 138 aa23.32■■□□□ 1.32
SMIM4-203ENST00000477703 RIPOR2Q9Y4F9 1068 aa23.32■■□□□ 1.32
SMIM4-203ENST00000477703 HSPA1LP34931 641 aa23.31■■□□□ 1.32
SMIM4-203ENST00000477703 MCM2P49736 904 aa23.3■■□□□ 1.32
SMIM4-203ENST00000477703 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
SMIM4-203ENST00000477703 NECTIN1Q15223 517 aa23.3■■□□□ 1.32
SMIM4-203ENST00000477703 MAP4K1Q92918 833 aa23.3■■□□□ 1.32
SMIM4-203ENST00000477703 CCDC171Q6TFL3 1326 aa23.3■■□□□ 1.32
SMIM4-203ENST00000477703 RFX7Q2KHR2 1363 aa23.3■■□□□ 1.32
SMIM4-203ENST00000477703 MED23Q9ULK4 1368 aa23.3■■□□□ 1.32
SMIM4-203ENST00000477703 IL27Q8NEV9 243 aa23.29■■□□□ 1.32
SMIM4-203ENST00000477703 DNAJC2Q99543 621 aaKnown RBP23.29■■□□□ 1.32
SMIM4-203ENST00000477703 BTAF1O14981 1849 aa23.29■■□□□ 1.32
SMIM4-203ENST00000477703 AK7Q96M32 723 aa23.29■■□□□ 1.32
SMIM4-203ENST00000477703 UPF3BQ9BZI7 483 aaKnown RBP23.29■■□□□ 1.32
SMIM4-203ENST00000477703 BCORQ6W2J9 1755 aa23.28■■□□□ 1.32
SMIM4-203ENST00000477703 ANKRD18BA2A2Z9 1011 aa23.28■■□□□ 1.32
SMIM4-203ENST00000477703 TAF7LQ5H9L4 462 aa23.28■■□□□ 1.32
SMIM4-203ENST00000477703 TMX3Q96JJ7 454 aa23.28■■□□□ 1.32
SMIM4-203ENST00000477703 GJD4Q96KN9 370 aaPredicted RBP23.28■■□□□ 1.32
SMIM4-203ENST00000477703 AKAP2Q9Y2D5 859 aa23.28■■□□□ 1.32
SMIM4-203ENST00000477703 KCNQ4P56696 695 aa23.27■■□□□ 1.32
SMIM4-203ENST00000477703 ZNF589Q86UQ0 364 aaPredicted RBP23.27■■□□□ 1.32
SMIM4-203ENST00000477703 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.27■■□□□ 1.32
SMIM4-203ENST00000477703 RIC1Q4ADV7 1423 aa23.27■■□□□ 1.32
SMIM4-203ENST00000477703 CHGBP05060 677 aa23.27■■□□□ 1.32
SMIM4-203ENST00000477703 MCM4P33991 863 aa23.27■■□□□ 1.32
SMIM4-203ENST00000477703 PARP10Q53GL7 1025 aa23.27■■□□□ 1.32
SMIM4-203ENST00000477703 LDHAL6AQ6ZMR3 332 aa23.27■■□□□ 1.32
SMIM4-203ENST00000477703 KBTBD3Q8NAB2 608 aa23.27■■□□□ 1.32
SMIM4-203ENST00000477703 TNPO1Q92973 898 aaKnown RBP23.27■■□□□ 1.32
SMIM4-203ENST00000477703 UTP14AQ9BVJ6 771 aaKnown RBP23.27■■□□□ 1.32
SMIM4-203ENST00000477703 NHSQ6T4R5 1651 aa23.27■■□□□ 1.31
SMIM4-203ENST00000477703 DDX60Q8IY21 1712 aaKnown RBP23.26■■□□□ 1.31
SMIM4-203ENST00000477703 SH3TC1Q8TE82 1336 aa23.26■■□□□ 1.31
SMIM4-203ENST00000477703 ONECUT3O60422 494 aaPredicted RBP23.26■■□□□ 1.31
SMIM4-203ENST00000477703 ADORA1P30542 326 aa23.26■■□□□ 1.31
SMIM4-203ENST00000477703 PRPF40BQ6NWY9 871 aaKnown RBP23.26■■□□□ 1.31
SMIM4-203ENST00000477703 DDX46Q7L014 1031 aaKnown RBP23.26■■□□□ 1.31
SMIM4-203ENST00000477703 XAGE2Q96GT9 111 aa23.26■■□□□ 1.31
SMIM4-203ENST00000477703 TTC14Q96N46 770 aa23.26■■□□□ 1.31
SMIM4-203ENST00000477703 RBM8AQ9Y5S9 174 aaKnown RBP23.26■■□□□ 1.31
SMIM4-203ENST00000477703 CUL4AQ13619 759 aa23.25■■□□□ 1.31
SMIM4-203ENST00000477703 FAM182BQ5T319 152 aa23.25■■□□□ 1.31
SMIM4-203ENST00000477703 ZGPATQ8N5A5 531 aaKnown RBP23.25■■□□□ 1.31
SMIM4-203ENST00000477703 CWC22Q9HCG8 908 aaKnown RBP23.25■■□□□ 1.31
SMIM4-203ENST00000477703 PAG1Q9NWQ8 432 aa23.25■■□□□ 1.31
SMIM4-203ENST00000477703 AFF2P51816 1311 aa23.25■■□□□ 1.31
SMIM4-203ENST00000477703 CNTNAP4Q9C0A0 1308 aa23.25■■□□□ 1.31
SMIM4-203ENST00000477703 TAF5LO75529 589 aa23.24■■□□□ 1.31
SMIM4-203ENST00000477703 HCLS1P14317 486 aaPredicted RBP23.24■■□□□ 1.31
SMIM4-203ENST00000477703 MEX3CQ5U5Q3 659 aaKnown RBP23.24■■□□□ 1.31
SMIM4-203ENST00000477703 VGLL2Q8N8G2 317 aa23.24■■□□□ 1.31
SMIM4-203ENST00000477703 SBF2Q86WG5 1849 aa23.24■■□□□ 1.31
SMIM4-203ENST00000477703 SPEF2Q9C093 1822 aa23.24■■□□□ 1.31
SMIM4-203ENST00000477703 NTSR2O95665 410 aa23.24■■□□□ 1.31
SMIM4-203ENST00000477703 IFIT1P09914 478 aaKnown RBP23.24■■□□□ 1.31
SMIM4-203ENST00000477703 TICAM2Q86XR7 235 aa23.24■■□□□ 1.31
SMIM4-203ENST00000477703 NIP7Q9Y221 180 aaKnown RBP eCLIP23.24■■□□□ 1.31
SMIM4-203ENST00000477703 GOLIM4O00461 696 aa23.23■■□□□ 1.31
SMIM4-203ENST00000477703 ADCK5Q3MIX3 580 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms