RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PARP10Q53GL7 1025 aa8.79□□□□□ -1
RTFDC1-206ENST00000477485 CST9Q5W186 159 aa8.79□□□□□ -1
RTFDC1-206ENST00000477485 CIAPIN1Q6FI81 312 aa8.79□□□□□ -1
RTFDC1-206ENST00000477485 DDX46Q7L014 1031 aaKnown RBP8.79□□□□□ -1
RTFDC1-206ENST00000477485 ZNF34Q8IZ26 560 aa8.79□□□□□ -1
RTFDC1-206ENST00000477485 MPNDQ8N594 471 aa8.79□□□□□ -1
RTFDC1-206ENST00000477485 ZNRF3Q9ULT6 936 aa8.79□□□□□ -1
RTFDC1-206ENST00000477485 ATP6V0A2Q9Y487 856 aa8.79□□□□□ -1
RTFDC1-206ENST00000477485 LRRC37AA6NMS7 1700 aa8.78□□□□□ -1
RTFDC1-206ENST00000477485 ZBTB22O15209 634 aa8.78□□□□□ -1
RTFDC1-206ENST00000477485 HCLS1P14317 486 aaPredicted RBP8.78□□□□□ -1
RTFDC1-206ENST00000477485 CXCL9Q07325 125 aa8.78□□□□□ -1
RTFDC1-206ENST00000477485 TNIP1Q15025 636 aa8.78□□□□□ -1
RTFDC1-206ENST00000477485 NFE2L2Q16236 605 aa8.78□□□□□ -1
RTFDC1-206ENST00000477485 ERBB4Q15303 1308 aa8.78□□□□□ -1
RTFDC1-206ENST00000477485 SPEF2Q9C093 1822 aa8.77□□□□□ -1
RTFDC1-206ENST00000477485 H7C1D1 291 aa8.77□□□□□ -1.01
RTFDC1-206ENST00000477485 HOXD11P31277 338 aaPredicted RBP8.77□□□□□ -1.01
RTFDC1-206ENST00000477485 MAP2K2P36507 400 aa8.77□□□□□ -1.01
RTFDC1-206ENST00000477485 DGKZQ13574 1117 aa8.77□□□□□ -1.01
RTFDC1-206ENST00000477485 SAPCD2Q86UD0 394 aa8.77□□□□□ -1.01
RTFDC1-206ENST00000477485 MCOLN1Q9GZU1 580 aa8.77□□□□□ -1.01
RTFDC1-206ENST00000477485 PNNQ9H307 717 aaKnown RBP8.77□□□□□ -1.01
RTFDC1-206ENST00000477485 TRMT112Q9UI30 125 aaKnown RBP8.77□□□□□ -1.01
RTFDC1-206ENST00000477485 CNOT7Q9UIV1 285 aaKnown RBP8.77□□□□□ -1.01
RTFDC1-206ENST00000477485 SHTN1A0MZ66 631 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 RIMBP2O15034 1052 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 CA12O43570 354 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 HUNKP57058 714 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 PROSER3Q2NL68 480 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 HSP90AB3PQ58FF7 597 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 RBM26Q5T8P6 1007 aaKnown RBP8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 CDC37L1Q7L3B6 337 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 SP8Q8IXZ3 490 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 MICALL2Q8IY33 904 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 TRPM4Q8TD43 1214 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 VPS33BQ9H267 617 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 LAS1LQ9Y4W2 734 aaKnown RBP8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 DUOX1Q9NRD9 1551 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 CDHR2Q9BYE9 1310 aa8.76□□□□□ -1.01
RTFDC1-206ENST00000477485 G3V3G9 751 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 C6orf229H3BNL8 230 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 BBOX1O75936 387 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 BRPF1P55201 1214 aaPredicted RBP8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 RIPK4P57078 832 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 KIAA2012Q0VF49 1180 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 GRAPQ13588 217 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 NEUROD2Q15784 382 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 TBC1D10BQ4KMP7 808 aaPredicted RBP8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 DCAF8Q5TAQ9 597 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 COPS6Q7L5N1 327 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 USP48Q86UV5 1035 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 NLRP10Q86W26 655 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 GRAPLQ8TC17 118 aaPredicted RBP8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 XAGE3Q8WTP9 111 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 PLEKHF1Q96S99 279 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 DBNDD1Q9H9R9 158 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 ZBTB12Q9Y330 459 aaPredicted RBP8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 SH3TC1Q8TE82 1336 aa8.75□□□□□ -1.01
RTFDC1-206ENST00000477485 SLC34A2O95436 690 aa8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 HIRAP54198 1017 aaPredicted RBP8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 NOGQ13253 232 aa8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 WASHC4Q2M389 1173 aa8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 RTL5Q5HYW3 569 aaPredicted RBP8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 SLC10A5Q5PT55 438 aa8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 DLK2Q6UY11 383 aa8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 SAMD7Q7Z3H4 446 aa8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 RTFDC1Q9BY42 306 aaPredicted RBP8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 NSFL1CQ9UNZ2 370 aaKnown RBP8.74□□□□□ -1.01
RTFDC1-206ENST00000477485 SCN9AQ15858 1988 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 PSME4Q14997 1843 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 YDJCA8MPS7 323 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 ADM5C9JUS6 153 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 PSMD14O00487 310 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 LMOD3Q0VAK6 560 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 PDIA6Q15084 440 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 DOK7Q18PE1 504 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 KRT26Q7Z3Y9 468 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 C2orf69Q8N8R5 385 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 ZC3H15Q8WU90 426 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 DCPSQ96C86 337 aaKnown RBP8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 HHIPL1Q96JK4 782 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 ZIC5Q96T25 663 aa8.73□□□□□ -1.01
RTFDC1-206ENST00000477485 COL4A1P02462 1669 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 MYH3P11055 1940 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 ATP5J2-PTCD1G3V325 749 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 ECE2O60344 883 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 ZNF157P51786 506 aaPredicted RBP8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 TCIRG1Q13488 830 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 RGMBQ6NW40 437 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 TMC4Q7Z404 712 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 CCDC146Q8IYE0 955 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 FAM89AQ96GI7 184 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 GBA2Q9HCG7 927 aaPredicted RBP8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 CHPF2Q9P2E5 772 aa8.72□□□□□ -1.01
RTFDC1-206ENST00000477485 SOX10P56693 466 aa8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 GPSM2P81274 684 aa8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 KIF23Q02241 960 aaPredicted RBP8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 KRT24Q2M2I5 525 aa8.71□□□□□ -1.02
RTFDC1-206ENST00000477485 KIF4BQ2VIQ3 1234 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms