RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 RRAGCQ9HB90 399 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 USTQ9Y2C2 406 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 TOPBP1Q92547 1522 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 CNTNAP5Q8WYK1 1306 aa7.2□□□□□ -1.26
PDZRN3-206ENST00000477434 OPLAHO14841 1288 aa7.19□□□□□ -1.26
PDZRN3-206ENST00000477434 HOXB4P17483 251 aaPredicted RBP7.19□□□□□ -1.26
PDZRN3-206ENST00000477434 SNRPNP63162 240 aaKnown RBP7.19□□□□□ -1.26
PDZRN3-206ENST00000477434 ETFBKMTQ8IXQ9 262 aa7.19□□□□□ -1.26
PDZRN3-206ENST00000477434 BHMTQ93088 406 aa7.19□□□□□ -1.26
PDZRN3-206ENST00000477434 MKL2Q9ULH7 1088 aa7.19□□□□□ -1.26
PDZRN3-206ENST00000477434 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
PDZRN3-206ENST00000477434 IRS1P35568 1242 aa7.18□□□□□ -1.26
PDZRN3-206ENST00000477434 DGKGP49619 791 aa7.18□□□□□ -1.26
PDZRN3-206ENST00000477434 RASSF7Q02833 373 aa7.18□□□□□ -1.26
PDZRN3-206ENST00000477434 FBXO41Q8TF61 875 aa7.18□□□□□ -1.26
PDZRN3-206ENST00000477434 PNMA5Q96PV4 448 aa7.18□□□□□ -1.26
PDZRN3-206ENST00000477434 RTCBQ9Y3I0 505 aaKnown RBP7.18□□□□□ -1.26
PDZRN3-206ENST00000477434 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.18□□□□□ -1.26
PDZRN3-206ENST00000477434 TARBP1Q13395 1621 aaKnown RBP7.17□□□□□ -1.26
PDZRN3-206ENST00000477434 PIK3R2O00459 728 aa7.17□□□□□ -1.26
PDZRN3-206ENST00000477434 ILDR2Q71H61 639 aa7.17□□□□□ -1.26
PDZRN3-206ENST00000477434 STIM2Q9P246 746 aa7.17□□□□□ -1.26
PDZRN3-206ENST00000477434 SEPT3Q9UH03 358 aa7.17□□□□□ -1.26
PDZRN3-206ENST00000477434 EGFRP00533 1210 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 NFKB1P19838 968 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 ADH7P40394 386 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 FAM26DQ5JW98 314 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 LINC00114Q6XXX2 140 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 RGL4Q8IZJ4 473 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 TMEM151AQ8N4L1 468 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 ABTB2Q8N961 1025 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 FAM13BQ9NYF5 915 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 DNMBPQ6XZF7 1577 aa7.16□□□□□ -1.26
PDZRN3-206ENST00000477434 CARNS1A5YM72 827 aa7.15□□□□□ -1.26
PDZRN3-206ENST00000477434 MAP3K6O95382 1288 aa7.15□□□□□ -1.26
PDZRN3-206ENST00000477434 HELQQ8TDG4 1101 aa7.15□□□□□ -1.26
PDZRN3-206ENST00000477434 UBE2OQ9C0C9 1292 aaKnown RBP7.15□□□□□ -1.26
PDZRN3-206ENST00000477434 IFT140Q96RY7 1462 aa7.15□□□□□ -1.27
PDZRN3-206ENST00000477434 CHD1O14646 1710 aa7.15□□□□□ -1.27
PDZRN3-206ENST00000477434 GNB5O14775 395 aa7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 AQRO60306 1485 aaKnown RBP eCLIP7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 GDF11O95390 407 aa7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 POLA1P09884 1462 aaPredicted RBP7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 PHLDB3Q6NSJ2 640 aa7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 CMTR1Q8N1G2 835 aaKnown RBP7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 ZFATQ9P243 1243 aa7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 MTMR7Q9Y216 660 aa7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 USP20Q9Y2K6 914 aa7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 RAD54L2Q9Y4B4 1467 aa7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 KCNMB2Q9Y691 235 aa7.14□□□□□ -1.27
PDZRN3-206ENST00000477434 ERCC6L2Q5T890 1561 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 XYLBO75191 536 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 SASH3O75995 380 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 SCNN1AP37088 669 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 ZAP70P43403 619 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 PDE4CQ08493 712 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 PCSK7Q16549 785 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 B4GALNT3Q6L9W6 998 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 ALYREFQ86V81 257 aaKnown RBP7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 PIK3R5Q8WYR1 880 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 DNAJB12Q9NXW2 375 aaKnown RBP7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 STARD13Q9Y3M8 1113 aa7.13□□□□□ -1.27
PDZRN3-206ENST00000477434 ZBTB39O15060 712 aa7.12□□□□□ -1.27
PDZRN3-206ENST00000477434 RARAP10276 462 aa7.12□□□□□ -1.27
PDZRN3-206ENST00000477434 TARSP26639 723 aaKnown RBP7.12□□□□□ -1.27
PDZRN3-206ENST00000477434 TBC1D8BQ0IIM8 1120 aa7.12□□□□□ -1.27
PDZRN3-206ENST00000477434 KRT25Q7Z3Z0 450 aa7.12□□□□□ -1.27
PDZRN3-206ENST00000477434 GTF3C2Q8WUA4 911 aaPredicted RBP7.12□□□□□ -1.27
PDZRN3-206ENST00000477434 IGFLR1Q9H665 355 aa7.12□□□□□ -1.27
PDZRN3-206ENST00000477434 PRDM6Q9NQX0 595 aa7.12□□□□□ -1.27
PDZRN3-206ENST00000477434 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
PDZRN3-206ENST00000477434 M0R082 166 aa7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 ALBP02768 609 aa7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 ARID4AP29374 1257 aaPredicted RBP7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 C20orf204Q6ZNR8 217 aa7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 DHX32Q7L7V1 743 aaKnown RBP7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 MICALL1Q8N3F8 863 aa7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 RETREG2Q8NC44 543 aa7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 ZNF417Q8TAU3 575 aa7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 ZNF587Q96SQ5 575 aaPredicted RBP7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 NOP53Q9NZM5 478 aaKnown RBP7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 CUX1P39880 1505 aa7.11□□□□□ -1.27
PDZRN3-206ENST00000477434 TRIP4Q15650 581 aaPredicted RBP7.1□□□□□ -1.27
PDZRN3-206ENST00000477434 NLRP13Q86W25 1043 aa7.1□□□□□ -1.27
PDZRN3-206ENST00000477434 TRPM4Q8TD43 1214 aa7.1□□□□□ -1.27
PDZRN3-206ENST00000477434 DCAF5Q96JK2 942 aa7.1□□□□□ -1.27
PDZRN3-206ENST00000477434 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
PDZRN3-206ENST00000477434 UBAP1LF5GYI3 381 aa7.09□□□□□ -1.27
PDZRN3-206ENST00000477434 COL8A1P27658 744 aa7.09□□□□□ -1.27
PDZRN3-206ENST00000477434 NRLP54845 237 aa7.09□□□□□ -1.27
PDZRN3-206ENST00000477434 GPLD1P80108 840 aa7.09□□□□□ -1.27
PDZRN3-206ENST00000477434 NOM1Q5C9Z4 860 aaKnown RBP7.09□□□□□ -1.27
PDZRN3-206ENST00000477434 GPR152Q8TDT2 470 aa7.09□□□□□ -1.27
PDZRN3-206ENST00000477434 TRIM11Q96F44 468 aa7.09□□□□□ -1.27
PDZRN3-206ENST00000477434 SUV39H2Q9H5I1 410 aa7.09□□□□□ -1.27
PDZRN3-206ENST00000477434 TLR7Q9NYK1 1049 aaKnown RBP7.09□□□□□ -1.27
PDZRN3-206ENST00000477434 CLASP1Q7Z460 1538 aa7.08□□□□□ -1.28
PDZRN3-206ENST00000477434 ZBTB42B2RXF5 422 aa7.08□□□□□ -1.28
PDZRN3-206ENST00000477434 LILRB5O75023 590 aa7.08□□□□□ -1.28
PDZRN3-206ENST00000477434 HOXD8P13378 290 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms