RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 ZDHHC13Q8IUH4 622 aa6.89□□□□□ -1.31
XRN1-211ENST00000477237 AGGF1Q8N302 714 aaeCLIP6.89□□□□□ -1.31
XRN1-211ENST00000477237 TSEN2Q8NCE0 465 aaKnown RBP6.89□□□□□ -1.31
XRN1-211ENST00000477237 NGLY1Q96IV0 654 aa6.89□□□□□ -1.31
XRN1-211ENST00000477237 C2orf49Q9BVC5 232 aaPredicted RBP6.89□□□□□ -1.31
XRN1-211ENST00000477237 ALG2Q9H553 416 aa6.89□□□□□ -1.31
XRN1-211ENST00000477237 BCS1LQ9Y276 419 aa6.89□□□□□ -1.31
XRN1-211ENST00000477237 M0R2N6 131 aa6.88□□□□□ -1.31
XRN1-211ENST00000477237 GLB1P16278 677 aa6.88□□□□□ -1.31
XRN1-211ENST00000477237 TARSP26639 723 aaKnown RBP6.88□□□□□ -1.31
XRN1-211ENST00000477237 JAG1P78504 1218 aa6.88□□□□□ -1.31
XRN1-211ENST00000477237 GPLD1P80108 840 aa6.88□□□□□ -1.31
XRN1-211ENST00000477237 HFE2Q6ZVN8 426 aa6.88□□□□□ -1.31
XRN1-211ENST00000477237 IFT43Q96FT9 208 aa6.88□□□□□ -1.31
XRN1-211ENST00000477237 UBL7Q96S82 380 aaPredicted RBP6.88□□□□□ -1.31
XRN1-211ENST00000477237 STOML1Q9UBI4 398 aa6.88□□□□□ -1.31
XRN1-211ENST00000477237 TGFBR3LH3BV60 316 aa6.87□□□□□ -1.31
XRN1-211ENST00000477237 STAG2Q8N3U4 1231 aa6.87□□□□□ -1.31
XRN1-211ENST00000477237 ATAD2Q6PL18 1390 aa6.86□□□□□ -1.31
XRN1-211ENST00000477237 SETDB1Q15047 1291 aa6.86□□□□□ -1.31
XRN1-211ENST00000477237 DTX1Q86Y01 620 aa6.86□□□□□ -1.31
XRN1-211ENST00000477237 ADGRE2Q9UHX3 823 aa6.86□□□□□ -1.31
XRN1-211ENST00000477237 SASH3O75995 380 aa6.85□□□□□ -1.31
XRN1-211ENST00000477237 EIF2AK2P19525 551 aaKnown RBP6.85□□□□□ -1.31
XRN1-211ENST00000477237 INPP5BP32019 993 aa6.85□□□□□ -1.31
XRN1-211ENST00000477237 ATP1A2P50993 1020 aa6.85□□□□□ -1.31
XRN1-211ENST00000477237 INTS5Q6P9B9 1019 aaKnown RBP6.85□□□□□ -1.31
XRN1-211ENST00000477237 ARMC10Q8N2F6 343 aa6.85□□□□□ -1.31
XRN1-211ENST00000477237 PRR19A6NJB7 356 aa6.84□□□□□ -1.31
XRN1-211ENST00000477237 RARAP10276 462 aa6.84□□□□□ -1.31
XRN1-211ENST00000477237 EPB42P16452 691 aa6.84□□□□□ -1.31
XRN1-211ENST00000477237 GRIK1P39086 918 aa6.84□□□□□ -1.31
XRN1-211ENST00000477237 NFIAQ12857 509 aa6.84□□□□□ -1.31
XRN1-211ENST00000477237 RTN1Q16799 776 aa6.84□□□□□ -1.31
XRN1-211ENST00000477237 GDF6Q6KF10 455 aaPredicted RBP6.84□□□□□ -1.31
XRN1-211ENST00000477237 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
XRN1-211ENST00000477237 IL22RA1Q8N6P7 574 aa6.84□□□□□ -1.31
XRN1-211ENST00000477237 CHMP7Q8WUX9 453 aaPredicted RBP6.84□□□□□ -1.31
XRN1-211ENST00000477237 SCG3Q8WXD2 468 aaKnown RBP6.84□□□□□ -1.31
XRN1-211ENST00000477237 DHX15O43143 795 aaKnown RBP6.83□□□□□ -1.32
XRN1-211ENST00000477237 WNT11O96014 354 aa6.83□□□□□ -1.32
XRN1-211ENST00000477237 IDH3AP50213 366 aa6.83□□□□□ -1.32
XRN1-211ENST00000477237 NRLP54845 237 aa6.83□□□□□ -1.32
XRN1-211ENST00000477237 PLD4Q96BZ4 506 aa6.83□□□□□ -1.32
XRN1-211ENST00000477237 J3QW42 95 aa6.82□□□□□ -1.32
XRN1-211ENST00000477237 DKK1O94907 266 aa6.82□□□□□ -1.32
XRN1-211ENST00000477237 PLEKHM2Q8IWE5 1019 aa6.82□□□□□ -1.32
XRN1-211ENST00000477237 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
XRN1-211ENST00000477237 LARGE2Q8N3Y3 721 aa6.82□□□□□ -1.32
XRN1-211ENST00000477237 OGFOD1Q8N543 542 aa6.82□□□□□ -1.32
XRN1-211ENST00000477237 C7orf69Q9H7B7 122 aa6.82□□□□□ -1.32
XRN1-211ENST00000477237 SRA1Q9HD15 236 aaKnown RBP6.82□□□□□ -1.32
XRN1-211ENST00000477237 USP17L3A6NCW0 530 aa6.81□□□□□ -1.32
XRN1-211ENST00000477237 USP17L4A6NCW7 530 aa6.81□□□□□ -1.32
XRN1-211ENST00000477237 PALM3A6NDB9 673 aaPredicted RBP6.81□□□□□ -1.32
XRN1-211ENST00000477237 OGFOD2Q6N063 350 aa6.81□□□□□ -1.32
XRN1-211ENST00000477237 USP17L2Q6R6M4 530 aa6.81□□□□□ -1.32
XRN1-211ENST00000477237 USP17L1Q7RTZ2 530 aa6.81□□□□□ -1.32
XRN1-211ENST00000477237 SIX5Q8N196 739 aa6.81□□□□□ -1.32
XRN1-211ENST00000477237 HMX2A2RU54 273 aa6.8□□□□□ -1.32
XRN1-211ENST00000477237 WISP1O95388 367 aa6.8□□□□□ -1.32
XRN1-211ENST00000477237 LCE4AQ5TA78 99 aa6.8□□□□□ -1.32
XRN1-211ENST00000477237 RNF43Q68DV7 783 aa6.8□□□□□ -1.32
XRN1-211ENST00000477237 MAP4K3Q8IVH8 894 aa6.8□□□□□ -1.32
XRN1-211ENST00000477237 GAS2L2Q8NHY3 880 aa6.8□□□□□ -1.32
XRN1-211ENST00000477237 ZNF594Q96JF6 807 aaPredicted RBP6.8□□□□□ -1.32
XRN1-211ENST00000477237 TLR7Q9NYK1 1049 aaKnown RBP6.8□□□□□ -1.32
XRN1-211ENST00000477237 KLK14Q9P0G3 267 aa6.8□□□□□ -1.32
XRN1-211ENST00000477237 LOC102724428A0A0B4J2F2 783 aa6.79□□□□□ -1.32
XRN1-211ENST00000477237 ARSDP51689 593 aa6.79□□□□□ -1.32
XRN1-211ENST00000477237 SIK1P57059 783 aa6.79□□□□□ -1.32
XRN1-211ENST00000477237 GALNT11Q8NCW6 608 aa6.79□□□□□ -1.32
XRN1-211ENST00000477237 DBNDD2Q9BQY9 259 aa6.79□□□□□ -1.32
XRN1-211ENST00000477237 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
XRN1-211ENST00000477237 ARID4AP29374 1257 aaPredicted RBP6.78□□□□□ -1.32
XRN1-211ENST00000477237 ABI1Q8IZP0 508 aa6.78□□□□□ -1.32
XRN1-211ENST00000477237 DCAF11Q8TEB1 546 aa6.78□□□□□ -1.32
XRN1-211ENST00000477237 UTP4Q969X6 686 aaKnown RBP6.78□□□□□ -1.32
XRN1-211ENST00000477237 MKRN1Q9UHC7 482 aaKnown RBP6.78□□□□□ -1.32
XRN1-211ENST00000477237 TRIM33Q9UPN9 1127 aa6.78□□□□□ -1.32
XRN1-211ENST00000477237 COG6Q9Y2V7 657 aa6.78□□□□□ -1.32
XRN1-211ENST00000477237 C8AP07357 584 aa6.77□□□□□ -1.33
XRN1-211ENST00000477237 RASA1P20936 1047 aa6.77□□□□□ -1.33
XRN1-211ENST00000477237 FAM46AQ96IP4 442 aaKnown RBP6.77□□□□□ -1.33
XRN1-211ENST00000477237 CEP41Q9BYV8 373 aa6.77□□□□□ -1.33
XRN1-211ENST00000477237 USP20Q9Y2K6 914 aa6.77□□□□□ -1.33
XRN1-211ENST00000477237 GHRHP01286 108 aa6.76□□□□□ -1.33
XRN1-211ENST00000477237 MCM6Q14566 821 aa6.76□□□□□ -1.33
XRN1-211ENST00000477237 ACAD11Q709F0 780 aa6.76□□□□□ -1.33
XRN1-211ENST00000477237 SHKBP1Q8TBC3 707 aa6.76□□□□□ -1.33
XRN1-211ENST00000477237 ADAMTS19Q8TE59 1207 aa6.76□□□□□ -1.33
XRN1-211ENST00000477237 NSUN5Q96P11 429 aaKnown RBP6.76□□□□□ -1.33
XRN1-211ENST00000477237 KCNK4Q9NYG8 393 aa6.76□□□□□ -1.33
XRN1-211ENST00000477237 LGR5O75473 907 aa6.75□□□□□ -1.33
XRN1-211ENST00000477237 MICAL2O94851 1124 aa6.75□□□□□ -1.33
XRN1-211ENST00000477237 HOXA10P31260 410 aaPredicted RBP6.75□□□□□ -1.33
XRN1-211ENST00000477237 DGKZQ13574 1117 aa6.75□□□□□ -1.33
XRN1-211ENST00000477237 UVSSAQ2YD98 709 aa6.75□□□□□ -1.33
XRN1-211ENST00000477237 MYRFLQ96LU7 910 aa6.75□□□□□ -1.33
XRN1-211ENST00000477237 UCN2Q96RP3 112 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms