RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 USP42Q9H9J4 1324 aaKnown RBP8.07□□□□□ -1.12
CCDC30-209ENST00000477155 TJP1Q07157 1748 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.06□□□□□ -1.12
CCDC30-209ENST00000477155 ONECUT3O60422 494 aaPredicted RBP8.06□□□□□ -1.12
CCDC30-209ENST00000477155 CTSWP56202 376 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 UTP14AQ9BVJ6 771 aaKnown RBP8.06□□□□□ -1.12
CCDC30-209ENST00000477155 PDE8AO60658 829 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 PHF14O94880 888 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 EVI5LQ96CN4 794 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 CNNM1Q9NRU3 951 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 FOXD4L1Q9NU39 408 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 SRP68Q9UHB9 627 aaKnown RBP8.06□□□□□ -1.12
CCDC30-209ENST00000477155 A0A1B0GUL7 405 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 EIF5BO60841 1220 aaKnown RBP8.06□□□□□ -1.12
CCDC30-209ENST00000477155 FSD1Q9BTV5 496 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 PLA2G12BQ9BX93 195 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 SH3TC1Q8TE82 1336 aa8.06□□□□□ -1.12
CCDC30-209ENST00000477155 ANKRD18BA2A2Z9 1011 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 TRIM37O94972 964 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 GTF2E1P29083 439 aaPredicted RBP8.05□□□□□ -1.12
CCDC30-209ENST00000477155 AMIGO3Q86WK7 504 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 CCDC24Q8N4L8 307 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 NUP98P52948 1817 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 CDHR2Q9BYE9 1310 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 CHGBP05060 677 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 GORABQ5T7V8 394 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 USPL1Q5W0Q7 1092 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 HELBQ8NG08 1087 aaPredicted RBP8.05□□□□□ -1.12
CCDC30-209ENST00000477155 FAM227BQ96M60 508 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 SEC31BQ9NQW1 1179 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 SGSM2O43147 1006 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 METTL24Q5JXM2 366 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 KIAA1211Q6ZU35 1233 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 DDX46Q7L014 1031 aaKnown RBP8.05□□□□□ -1.12
CCDC30-209ENST00000477155 PALD1Q9ULE6 856 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 ZNF652Q9Y2D9 606 aa8.05□□□□□ -1.12
CCDC30-209ENST00000477155 ATRNO75882 1429 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 ATP5JP18859 108 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 ADORA1P30542 326 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 KRT27Q7Z3Y8 459 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 RTCBQ9Y3I0 505 aaKnown RBP8.04□□□□□ -1.12
CCDC30-209ENST00000477155 ZPR1O75312 459 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 RPS6KA4O75676 772 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 HSP90AA1P07900 732 aaKnown RBP8.04□□□□□ -1.12
CCDC30-209ENST00000477155 PARP10Q53GL7 1025 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 TBC1D9BQ66K14 1250 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 SNRKQ9NRH2 765 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 LRRC4BQ9NT99 713 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 SNAP23O00161 211 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 CIAO1O76071 339 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 NMIQ13287 307 aaPredicted RBP8.04□□□□□ -1.12
CCDC30-209ENST00000477155 FAM196AQ6ZSG2 479 aa8.04□□□□□ -1.12
CCDC30-209ENST00000477155 ARHGEF1Q92888 912 aaKnown RBP8.04□□□□□ -1.12
CCDC30-209ENST00000477155 GOLIM4O00461 696 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 FKBP4Q02790 459 aaKnown RBP eCLIP8.03□□□□□ -1.12
CCDC30-209ENST00000477155 RABEP1Q15276 862 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 SLFNL1Q499Z3 407 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 ERFEQ4G0M1 354 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 RUFY2Q8WXA3 655 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 BCL11BQ9C0K0 894 aaPredicted RBP8.03□□□□□ -1.12
CCDC30-209ENST00000477155 RIPOR2Q9Y4F9 1068 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 NTSR2O95665 410 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 MCCP23508 829 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 NEK4P51957 841 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 PTH1RQ03431 593 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 NOL8Q76FK4 1167 aaKnown RBP8.03□□□□□ -1.12
CCDC30-209ENST00000477155 XAGE2Q96GT9 111 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 BCL2L12Q9HB09 334 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 CNTNAP4Q9C0A0 1308 aa8.03□□□□□ -1.12
CCDC30-209ENST00000477155 A0A0D9SFI3 127 aa8.02□□□□□ -1.12
CCDC30-209ENST00000477155 IFIT1P09914 478 aaKnown RBP8.02□□□□□ -1.12
CCDC30-209ENST00000477155 CLEC4GQ6UXB4 293 aa8.02□□□□□ -1.12
CCDC30-209ENST00000477155 SNX21Q969T3 373 aa8.02□□□□□ -1.12
CCDC30-209ENST00000477155 MPHOSPH8Q99549 860 aa8.02□□□□□ -1.12
CCDC30-209ENST00000477155 UPF3BQ9BZI7 483 aaKnown RBP8.02□□□□□ -1.12
CCDC30-209ENST00000477155 NPHP1O15259 732 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 TAF5LO75529 589 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 RFC4P35249 363 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 RC3H1Q5TC82 1133 aaKnown RBP8.02□□□□□ -1.13
CCDC30-209ENST00000477155 AK7Q96M32 723 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 SETDB2Q96T68 719 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 HAUS7Q99871 368 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 LSG1Q9H089 658 aaKnown RBP8.02□□□□□ -1.13
CCDC30-209ENST00000477155 GPR108Q9NPR9 543 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 NARFQ9UHQ1 456 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 AKAP2Q9Y2D5 859 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 THSD7AQ9UPZ6 1657 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 AK9Q5TCS8 1911 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 BTAF1O14981 1849 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 KCNJ4P48050 445 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 ATP2B3Q16720 1220 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 CCDC158Q5M9N0 1113 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 TTC39AQ5SRH9 613 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 TRAPPC3LQ5T215 181 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 SEC62Q99442 399 aaKnown RBP8.02□□□□□ -1.13
CCDC30-209ENST00000477155 ANTXR1Q9H6X2 564 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 TUBGCP6Q96RT7 1819 aa8.02□□□□□ -1.13
CCDC30-209ENST00000477155 K7ELQ4 463 aaPredicted RBP8.01□□□□□ -1.13
CCDC30-209ENST00000477155 CCDC152Q4G0S7 254 aa8.01□□□□□ -1.13
CCDC30-209ENST00000477155 PI16Q6UXB8 463 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms