RNA–Protein interactions for RNA: ENST00000476825.2

SPTAN1-207, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-207ENST00000476825 HCLS1P14317 486 aaPredicted RBP11.48□□□□□ -0.57
SPTAN1-207ENST00000476825 FOXO4P98177 505 aa11.48□□□□□ -0.57
SPTAN1-207ENST00000476825 RABL6Q3YEC7 729 aaPredicted RBP11.48□□□□□ -0.57
SPTAN1-207ENST00000476825 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
SPTAN1-207ENST00000476825 ITPRIPQ8IWB1 547 aa11.48□□□□□ -0.57
SPTAN1-207ENST00000476825 NLGN2Q8NFZ4 835 aa11.48□□□□□ -0.57
SPTAN1-207ENST00000476825 COG6Q9Y2V7 657 aa11.48□□□□□ -0.57
SPTAN1-207ENST00000476825 SNED1Q8TER0 1413 aa11.48□□□□□ -0.57
SPTAN1-207ENST00000476825 DUOX1Q9NRD9 1551 aa11.48□□□□□ -0.57
SPTAN1-207ENST00000476825 ZNF646O15015 1829 aaPredicted RBP11.47□□□□□ -0.57
SPTAN1-207ENST00000476825 PDE8AO60658 829 aa11.47□□□□□ -0.57
SPTAN1-207ENST00000476825 SRGNP10124 158 aa11.47□□□□□ -0.57
SPTAN1-207ENST00000476825 KCNA3P22001 575 aa11.47□□□□□ -0.57
SPTAN1-207ENST00000476825 CTSWP56202 376 aa11.47□□□□□ -0.57
SPTAN1-207ENST00000476825 TGFB2P61812 414 aa11.47□□□□□ -0.57
SPTAN1-207ENST00000476825 SF3B3Q15393 1217 aaKnown RBP11.47□□□□□ -0.57
SPTAN1-207ENST00000476825 ANKRD44Q8N8A2 993 aa11.47□□□□□ -0.57
SPTAN1-207ENST00000476825 C9orf78Q9NZ63 289 aaPredicted RBP11.47□□□□□ -0.57
SPTAN1-207ENST00000476825 NPHP1O15259 732 aa11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 CENPBP07199 599 aaPredicted RBP11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 CSF1RP07333 972 aa11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 GTF2E1P29083 439 aaPredicted RBP11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 CHRNA5P30532 468 aa11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 PDE6BP35913 854 aa11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 TTLL11Q8NHH1 800 aa11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 SYT17Q9BSW7 474 aa11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 DDX19BQ9UMR2 479 aa11.46□□□□□ -0.57
SPTAN1-207ENST00000476825 PSME4Q14997 1843 aa11.46□□□□□ -0.58
SPTAN1-207ENST00000476825 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.58
SPTAN1-207ENST00000476825 GNAI3P08754 354 aa11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 UBTFL1P0CB47 393 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 DPEP1P16444 411 aa11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 C2CD5Q86YS7 1000 aa11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 NLRP3Q96P20 1036 aa11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 CRBNQ96SW2 442 aa11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 ZBTB40Q9NUA8 1239 aa11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 PDZRN3Q9UPQ7 1066 aa11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 LRRFIP2Q9Y608 721 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 MYH13Q9UKX3 1938 aa11.45□□□□□ -0.58
SPTAN1-207ENST00000476825 HSP90B1P14625 803 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-207ENST00000476825 MTX1Q13505 466 aa11.44□□□□□ -0.58
SPTAN1-207ENST00000476825 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
SPTAN1-207ENST00000476825 STYK1Q6J9G0 422 aa11.44□□□□□ -0.58
SPTAN1-207ENST00000476825 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
SPTAN1-207ENST00000476825 MASTLQ96GX5 879 aa11.44□□□□□ -0.58
SPTAN1-207ENST00000476825 CHD4Q14839 1912 aa11.43□□□□□ -0.58
SPTAN1-207ENST00000476825 A0A0G2JLW4 131 aa11.43□□□□□ -0.58
SPTAN1-207ENST00000476825 H0YIN7 160 aa11.43□□□□□ -0.58
SPTAN1-207ENST00000476825 NPR1P16066 1061 aa11.43□□□□□ -0.58
SPTAN1-207ENST00000476825 LMBR1LQ6UX01 489 aa11.43□□□□□ -0.58
SPTAN1-207ENST00000476825 SLC51AQ86UW1 340 aa11.43□□□□□ -0.58
SPTAN1-207ENST00000476825 CRAMP1Q96RY5 1269 aa11.43□□□□□ -0.58
SPTAN1-207ENST00000476825 GREM2Q9H772 168 aa11.43□□□□□ -0.58
SPTAN1-207ENST00000476825 C1orf115Q9H7X2 142 aa11.43□□□□□ -0.58
SPTAN1-207ENST00000476825 GNAI2P04899 355 aa11.42□□□□□ -0.58
SPTAN1-207ENST00000476825 RFX5P48382 616 aaPredicted RBP11.42□□□□□ -0.58
SPTAN1-207ENST00000476825 CCDC152Q4G0S7 254 aa11.42□□□□□ -0.58
SPTAN1-207ENST00000476825 CELF1Q92879 486 aaKnown RBP11.42□□□□□ -0.58
SPTAN1-207ENST00000476825 CCDC85AQ96PX6 553 aaPredicted RBP11.42□□□□□ -0.58
SPTAN1-207ENST00000476825 SEC31BQ9NQW1 1179 aa11.42□□□□□ -0.58
SPTAN1-207ENST00000476825 RPGRQ92834 1020 aaKnown RBP11.41□□□□□ -0.58
SPTAN1-207ENST00000476825 PNMA6EA0A0J9YXQ4 647 aa11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 ITGA6P23229 1130 aa11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 IRX6P78412 446 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 GRAPQ13588 217 aa11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 EXOC6Q8TAG9 804 aa11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 GRAPLQ8TC17 118 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 C7orf43Q8WVR3 580 aa11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 CNKSR1Q969H4 720 aa11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 RBM17Q96I25 401 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 HDAC5Q9UQL6 1122 aa11.4□□□□□ -0.58
SPTAN1-207ENST00000476825 ALDH1B1P30837 517 aa11.39□□□□□ -0.59
SPTAN1-207ENST00000476825 POLA2Q14181 598 aa11.39□□□□□ -0.59
SPTAN1-207ENST00000476825 DDX46Q7L014 1031 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-207ENST00000476825 SIRT2Q8IXJ6 389 aa11.39□□□□□ -0.59
SPTAN1-207ENST00000476825 SSH3Q8TE77 659 aa11.39□□□□□ -0.59
SPTAN1-207ENST00000476825 ZNF622Q969S3 477 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPTAN1-207ENST00000476825 CHMP4BQ9H444 224 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-207ENST00000476825 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
SPTAN1-207ENST00000476825 SCN9AQ15858 1988 aa11.39□□□□□ -0.59
SPTAN1-207ENST00000476825 ANKRD18BA2A2Z9 1011 aa11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 YBX3P16989 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 PTPN12Q05209 780 aaKnown RBP11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 IFIT5Q13325 482 aaKnown RBP11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 TTLL6Q8N841 843 aa11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 CDC5LQ99459 802 aaKnown RBP11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 WWC3Q9ULE0 1092 aa11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 CHMP3Q9Y3E7 222 aa11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 COL4A5P29400 1685 aa11.38□□□□□ -0.59
SPTAN1-207ENST00000476825 SRGAP3O43295 1099 aa11.37□□□□□ -0.59
SPTAN1-207ENST00000476825 RPS8P62241 208 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms