RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 NAGPAQ9UK23 515 aa6.82□□□□□ -1.32
ITGA4-208ENST00000476824 SLC6A14Q9UN76 642 aa6.82□□□□□ -1.32
ITGA4-208ENST00000476824 A6NHS1 94 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 ZBTB42B2RXF5 422 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 MMP20O60882 483 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 EGFRP00533 1210 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 ALBP02768 609 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 ALAS2P22557 587 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 ARID4AP29374 1257 aaPredicted RBP6.81□□□□□ -1.32
ITGA4-208ENST00000476824 FKBP4Q02790 459 aaKnown RBP eCLIP6.81□□□□□ -1.32
ITGA4-208ENST00000476824 LINC00114Q6XXX2 140 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 DHX32Q7L7V1 743 aaKnown RBP6.81□□□□□ -1.32
ITGA4-208ENST00000476824 TXNDC2Q86VQ3 553 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 SCARF2Q96GP6 870 aaPredicted RBP6.81□□□□□ -1.32
ITGA4-208ENST00000476824 SUV39H2Q9H5I1 410 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 MTMR7Q9Y216 660 aa6.81□□□□□ -1.32
ITGA4-208ENST00000476824 H3BRB1 525 aa6.8□□□□□ -1.32
ITGA4-208ENST00000476824 M0R082 166 aa6.8□□□□□ -1.32
ITGA4-208ENST00000476824 MAP3K6O95382 1288 aa6.8□□□□□ -1.32
ITGA4-208ENST00000476824 HFE2Q6ZVN8 426 aa6.8□□□□□ -1.32
ITGA4-208ENST00000476824 ZNF417Q8TAU3 575 aa6.8□□□□□ -1.32
ITGA4-208ENST00000476824 ZNF587Q96SQ5 575 aaPredicted RBP6.8□□□□□ -1.32
ITGA4-208ENST00000476824 GGNBP2Q9H3C7 697 aa6.8□□□□□ -1.32
ITGA4-208ENST00000476824 TUT1Q9H6E5 874 aaKnown RBP6.8□□□□□ -1.32
ITGA4-208ENST00000476824 ICMTO60725 284 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 PDGFAP04085 211 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 NPR3P17342 541 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 AAMPQ13685 434 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 ECM1Q16610 540 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 PODNQ7Z5L7 613 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 NLRP13Q86W25 1043 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 BEND7Q8N7W2 519 aaPredicted RBP6.79□□□□□ -1.32
ITGA4-208ENST00000476824 NUDT8Q8WV74 236 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 EFCC1Q9HA90 598 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 CCDC87Q9NVE4 849 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 FAM13BQ9NYF5 915 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 POLIQ9UNA4 740 aa6.79□□□□□ -1.32
ITGA4-208ENST00000476824 J3QW42 95 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 FZD6O60353 706 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 CPB1P15086 417 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 RASSF7Q02833 373 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 PLAURQ03405 335 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 PDE4CQ08493 712 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 KCNMA1Q12791 1236 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 SF3B2Q13435 895 aaKnown RBP6.78□□□□□ -1.32
ITGA4-208ENST00000476824 C20orf204Q6ZNR8 217 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 FAM35AQ86V20 835 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 MICALL1Q8N3F8 863 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 TRIM11Q96F44 468 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 NSUN5Q96P11 429 aaKnown RBP6.78□□□□□ -1.32
ITGA4-208ENST00000476824 TLR7Q9NYK1 1049 aaKnown RBP6.78□□□□□ -1.32
ITGA4-208ENST00000476824 TMEM63CQ9P1W3 806 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 MKL2Q9ULH7 1088 aa6.78□□□□□ -1.32
ITGA4-208ENST00000476824 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.78□□□□□ -1.32
ITGA4-208ENST00000476824 FAM13AO94988 1023 aa6.77□□□□□ -1.33
ITGA4-208ENST00000476824 CYP2E1P05181 493 aaPredicted RBP6.77□□□□□ -1.33
ITGA4-208ENST00000476824 COL8A1P27658 744 aa6.77□□□□□ -1.33
ITGA4-208ENST00000476824 MZF1P28698 734 aaPredicted RBP6.77□□□□□ -1.33
ITGA4-208ENST00000476824 COL9A3Q14050 684 aaPredicted RBP6.77□□□□□ -1.33
ITGA4-208ENST00000476824 C8orf34Q49A92 452 aa6.77□□□□□ -1.33
ITGA4-208ENST00000476824 COL13A1Q5TAT6 717 aaPredicted RBP6.77□□□□□ -1.33
ITGA4-208ENST00000476824 PSAPL1Q6NUJ1 521 aa6.77□□□□□ -1.33
ITGA4-208ENST00000476824 GLYCTKQ8IVS8 523 aa6.77□□□□□ -1.33
ITGA4-208ENST00000476824 TRPM4Q8TD43 1214 aa6.77□□□□□ -1.33
ITGA4-208ENST00000476824 EGFL7Q9UHF1 273 aa6.77□□□□□ -1.33
ITGA4-208ENST00000476824 PHF20L1A8MW92 1017 aa6.76□□□□□ -1.33
ITGA4-208ENST00000476824 RNF225M0QZC1 329 aaPredicted RBP6.76□□□□□ -1.33
ITGA4-208ENST00000476824 PSAPP07602 524 aa6.76□□□□□ -1.33
ITGA4-208ENST00000476824 GPLD1P80108 840 aa6.76□□□□□ -1.33
ITGA4-208ENST00000476824 PERM1Q5SV97 790 aa6.76□□□□□ -1.33
ITGA4-208ENST00000476824 ALKBH2Q6NS38 261 aa6.76□□□□□ -1.33
ITGA4-208ENST00000476824 KANK3Q6NY19 840 aa6.76□□□□□ -1.33
ITGA4-208ENST00000476824 ELP3Q9H9T3 547 aa6.76□□□□□ -1.33
ITGA4-208ENST00000476824 JPH1Q9HDC5 661 aaPredicted RBP6.76□□□□□ -1.33
ITGA4-208ENST00000476824 CNTN3Q9P232 1028 aa6.76□□□□□ -1.33
ITGA4-208ENST00000476824 FNDC3AQ9Y2H6 1198 aaKnown RBP6.76□□□□□ -1.33
ITGA4-208ENST00000476824 GNB5O14775 395 aa6.75□□□□□ -1.33
ITGA4-208ENST00000476824 GDF11O95390 407 aa6.75□□□□□ -1.33
ITGA4-208ENST00000476824 BRD1O95696 1058 aa6.75□□□□□ -1.33
ITGA4-208ENST00000476824 NRLP54845 237 aa6.75□□□□□ -1.33
ITGA4-208ENST00000476824 ARHGAP4P98171 946 aa6.75□□□□□ -1.33
ITGA4-208ENST00000476824 ZNF438Q7Z4V0 828 aa6.75□□□□□ -1.33
ITGA4-208ENST00000476824 OR13H1Q8NG92 308 aa6.75□□□□□ -1.33
ITGA4-208ENST00000476824 LPIN3Q9BQK8 851 aa6.75□□□□□ -1.33
ITGA4-208ENST00000476824 PLVAPQ9BX97 442 aa6.75□□□□□ -1.33
ITGA4-208ENST00000476824 LOC102724428A0A0B4J2F2 783 aa6.74□□□□□ -1.33
ITGA4-208ENST00000476824 EIF2AK2P19525 551 aaKnown RBP6.74□□□□□ -1.33
ITGA4-208ENST00000476824 SIK1P57059 783 aa6.74□□□□□ -1.33
ITGA4-208ENST00000476824 TTC39BQ5VTQ0 682 aaPredicted RBP6.74□□□□□ -1.33
ITGA4-208ENST00000476824 TMEM151AQ8N4L1 468 aa6.74□□□□□ -1.33
ITGA4-208ENST00000476824 CCER1Q8TC90 406 aaPredicted RBP6.74□□□□□ -1.33
ITGA4-208ENST00000476824 ABI2Q9NYB9 513 aaPredicted RBP6.74□□□□□ -1.33
ITGA4-208ENST00000476824 KANSL3Q9P2N6 904 aa6.74□□□□□ -1.33
ITGA4-208ENST00000476824 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
ITGA4-208ENST00000476824 LILRB5O75023 590 aa6.73□□□□□ -1.33
ITGA4-208ENST00000476824 RGS9O75916 674 aaPredicted RBP6.73□□□□□ -1.33
ITGA4-208ENST00000476824 NID1P14543 1247 aa6.73□□□□□ -1.33
ITGA4-208ENST00000476824 PCSK2P16519 638 aa6.73□□□□□ -1.33
ITGA4-208ENST00000476824 AFF1P51825 1210 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms