RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ABCC4O15439 1325 aa15.1■□□□□ 0.01
BRCA1-213ENST00000476777 CDHR2Q9BYE9 1310 aa15.1■□□□□ 0.01
BRCA1-213ENST00000476777 PPP2R1AP30153 589 aa15.09■□□□□ 0.01
BRCA1-213ENST00000476777 DGKZQ13574 1117 aa15.09■□□□□ 0.01
BRCA1-213ENST00000476777 SLC10A5Q5PT55 438 aa15.09■□□□□ 0.01
BRCA1-213ENST00000476777 CDC37L1Q7L3B6 337 aa15.09■□□□□ 0.01
BRCA1-213ENST00000476777 PPP1R42Q7Z4L9 355 aa15.09■□□□□ 0.01
BRCA1-213ENST00000476777 SUPT20HQ8NEM7 779 aa15.09■□□□□ 0.01
BRCA1-213ENST00000476777 TRPM4Q8TD43 1214 aa15.09■□□□□ 0.01
BRCA1-213ENST00000476777 ZIC5Q96T25 663 aa15.09■□□□□ 0.01
BRCA1-213ENST00000476777 ZNF408Q9H9D4 720 aa15.09■□□□□ 0.01
BRCA1-213ENST00000476777 KDM3BQ7LBC6 1761 aa15.08■□□□□ 0.01
BRCA1-213ENST00000476777 RAD17O75943 681 aa15.08■□□□□ 0
BRCA1-213ENST00000476777 KIAA2012Q0VF49 1180 aa15.08■□□□□ 0
BRCA1-213ENST00000476777 PARP10Q53GL7 1025 aa15.08■□□□□ 0
BRCA1-213ENST00000476777 SHTN1A0MZ66 631 aa15.07■□□□□ 0
BRCA1-213ENST00000476777 NOGQ13253 232 aa15.07■□□□□ 0
BRCA1-213ENST00000476777 TNIP1Q15025 636 aa15.07■□□□□ 0
BRCA1-213ENST00000476777 DPP8Q6V1X1 898 aaPredicted RBP15.07■□□□□ 0
BRCA1-213ENST00000476777 LRP10Q7Z4F1 713 aa15.07■□□□□ 0
BRCA1-213ENST00000476777 SP8Q8IXZ3 490 aa15.07■□□□□ 0
BRCA1-213ENST00000476777 MPNDQ8N594 471 aa15.07■□□□□ 0
BRCA1-213ENST00000476777 UTP14AQ9BVJ6 771 aaKnown RBP15.07■□□□□ 0
BRCA1-213ENST00000476777 BCL2L13Q9BXK5 485 aa15.07■□□□□ 0
BRCA1-213ENST00000476777 BBOX1O75936 387 aa15.06■□□□□ 0
BRCA1-213ENST00000476777 THUMPD2Q9BTF0 503 aaKnown RBP15.06■□□□□ 0
BRCA1-213ENST00000476777 CNOT7Q9UIV1 285 aaKnown RBP15.06■□□□□ 0
BRCA1-213ENST00000476777 ERBB4Q15303 1308 aa15.06■□□□□ 0
BRCA1-213ENST00000476777 DLG5Q8TDM6 1919 aa15.05■□□□□ 0
BRCA1-213ENST00000476777 YDJCA8MPS7 323 aa15.05■□□□□ -0
BRCA1-213ENST00000476777 HUNKP57058 714 aa15.05■□□□□ -0
BRCA1-213ENST00000476777 DLK2Q6UY11 383 aa15.05■□□□□ -0
BRCA1-213ENST00000476777 POLR2AP24928 1970 aaKnown RBP15.05■□□□□ -0
BRCA1-213ENST00000476777 PDIA6Q15084 440 aa15.04■□□□□ -0
BRCA1-213ENST00000476777 USP48Q86UV5 1035 aa15.04■□□□□ -0
BRCA1-213ENST00000476777 FAM155AB1AL88 458 aaPredicted RBP15.03■□□□□ -0
BRCA1-213ENST00000476777 H7C1D1 291 aa15.03■□□□□ -0
BRCA1-213ENST00000476777 HCLS1P14317 486 aaPredicted RBP15.03■□□□□ -0
BRCA1-213ENST00000476777 MICALL2Q8IY33 904 aa15.03■□□□□ -0
BRCA1-213ENST00000476777 PLEKHF1Q96S99 279 aa15.03■□□□□ -0
BRCA1-213ENST00000476777 GRAPQ13588 217 aa15.02■□□□□ -0
BRCA1-213ENST00000476777 PROSER3Q2NL68 480 aa15.02■□□□□ -0
BRCA1-213ENST00000476777 SAMD7Q7Z3H4 446 aa15.02■□□□□ -0
BRCA1-213ENST00000476777 GRAPLQ8TC17 118 aaPredicted RBP15.02■□□□□ -0
BRCA1-213ENST00000476777 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
BRCA1-213ENST00000476777 LAMB2P55268 1798 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 ANKRD36CQ5JPF3 1778 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 NEFMP07197 916 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 NFE2L2Q16236 605 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 RGMBQ6NW40 437 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 DDX46Q7L014 1031 aaKnown RBP15.01□□□□□ -0.01
BRCA1-213ENST00000476777 KRT26Q7Z3Y9 468 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 NLRP10Q86W26 655 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 DPF2Q92785 391 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 SAGE1Q9NXZ1 904 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 DUOX1Q9NRD9 1551 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 TAF1P21675 1872 aa15.01□□□□□ -0.01
BRCA1-213ENST00000476777 PSMD14O00487 310 aa15□□□□□ -0.01
BRCA1-213ENST00000476777 EGFRP00533 1210 aa15□□□□□ -0.01
BRCA1-213ENST00000476777 ANXA1P04083 346 aa15□□□□□ -0.01
BRCA1-213ENST00000476777 EIF2S2P20042 333 aaKnown RBP15□□□□□ -0.01
BRCA1-213ENST00000476777 GBA2Q9HCG7 927 aaPredicted RBP15□□□□□ -0.01
BRCA1-213ENST00000476777 SOX10P56693 466 aa14.99□□□□□ -0.01
BRCA1-213ENST00000476777 KIF23Q02241 960 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-213ENST00000476777 TBC1D10BQ4KMP7 808 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-213ENST00000476777 HSP90AB3PQ58FF7 597 aa14.99□□□□□ -0.01
BRCA1-213ENST00000476777 TMC4Q7Z404 712 aa14.99□□□□□ -0.01
BRCA1-213ENST00000476777 CCDC102AQ96A19 550 aa14.99□□□□□ -0.01
BRCA1-213ENST00000476777 RNF186Q9NXI6 227 aa14.99□□□□□ -0.01
BRCA1-213ENST00000476777 SH3TC1Q8TE82 1336 aa14.98□□□□□ -0.01
BRCA1-213ENST00000476777 WASHC4Q2M389 1173 aa14.98□□□□□ -0.01
BRCA1-213ENST00000476777 COPS6Q7L5N1 327 aa14.98□□□□□ -0.01
BRCA1-213ENST00000476777 C2orf69Q8N8R5 385 aa14.98□□□□□ -0.01
BRCA1-213ENST00000476777 DBNDD1Q9H9R9 158 aa14.98□□□□□ -0.01
BRCA1-213ENST00000476777 TRMT112Q9UI30 125 aaKnown RBP14.98□□□□□ -0.01
BRCA1-213ENST00000476777 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
BRCA1-213ENST00000476777 ADM5C9JUS6 153 aa14.97□□□□□ -0.01
BRCA1-213ENST00000476777 TRPA1O75762 1119 aa14.97□□□□□ -0.01
BRCA1-213ENST00000476777 ZNF157P51786 506 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-213ENST00000476777 TCIRG1Q13488 830 aa14.97□□□□□ -0.01
BRCA1-213ENST00000476777 XAGE3Q8WTP9 111 aa14.97□□□□□ -0.01
BRCA1-213ENST00000476777 AKAP11Q9UKA4 1901 aa14.97□□□□□ -0.01
BRCA1-213ENST00000476777 LRRC37AA6NMS7 1700 aa14.97□□□□□ -0.01
BRCA1-213ENST00000476777 RPS12P25398 132 aaKnown RBP14.96□□□□□ -0.01
BRCA1-213ENST00000476777 AIMP1Q12904 312 aaKnown RBP14.96□□□□□ -0.01
BRCA1-213ENST00000476777 RBM26Q5T8P6 1007 aaKnown RBP14.96□□□□□ -0.01
BRCA1-213ENST00000476777 DCPSQ96C86 337 aaKnown RBP14.96□□□□□ -0.01
BRCA1-213ENST00000476777 CSRNP1Q96S65 589 aa14.96□□□□□ -0.01
BRCA1-213ENST00000476777 KCNQ5Q9NR82 932 aa14.96□□□□□ -0.01
BRCA1-213ENST00000476777 POLLQ9UGP5 575 aa14.96□□□□□ -0.01
BRCA1-213ENST00000476777 NSFL1CQ9UNZ2 370 aaKnown RBP14.96□□□□□ -0.01
BRCA1-213ENST00000476777 RTL9Q8NET4 1388 aa14.96□□□□□ -0.02
BRCA1-213ENST00000476777 RIMBP2O15034 1052 aa14.95□□□□□ -0.02
BRCA1-213ENST00000476777 SLC10A3P09131 477 aa14.95□□□□□ -0.02
BRCA1-213ENST00000476777 ZNF428Q96B54 188 aa14.95□□□□□ -0.02
BRCA1-213ENST00000476777 ECE2O60344 883 aa14.94□□□□□ -0.02
BRCA1-213ENST00000476777 CTU1Q7Z7A3 348 aaKnown RBP14.94□□□□□ -0.02
BRCA1-213ENST00000476777 NECTIN2Q92692 538 aa14.94□□□□□ -0.02
BRCA1-213ENST00000476777 CELF1Q92879 486 aaKnown RBP14.94□□□□□ -0.02
BRCA1-213ENST00000476777 MAPK8IP3Q9UPT6 1336 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms