RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 EPB42P16452 691 aa10.69□□□□□ -0.7
NUP58-209ENST00000476553 ELMSAN1Q6PJG2 1045 aa10.69□□□□□ -0.7
NUP58-209ENST00000476553 SCG3Q8WXD2 468 aaKnown RBP10.69□□□□□ -0.7
NUP58-209ENST00000476553 ZNF594Q96JF6 807 aaPredicted RBP10.69□□□□□ -0.7
NUP58-209ENST00000476553 MKRN1Q9UHC7 482 aaKnown RBP10.69□□□□□ -0.7
NUP58-209ENST00000476553 INPP5BP32019 993 aa10.68□□□□□ -0.7
NUP58-209ENST00000476553 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
NUP58-209ENST00000476553 AKTIPQ9H8T0 292 aa10.68□□□□□ -0.7
NUP58-209ENST00000476553 SSTR4P31391 388 aa10.67□□□□□ -0.7
NUP58-209ENST00000476553 Q6ZS46 218 aa10.67□□□□□ -0.7
NUP58-209ENST00000476553 C11orf16Q9NQ32 467 aa10.67□□□□□ -0.7
NUP58-209ENST00000476553 POM121CA8CG34 1229 aa10.66□□□□□ -0.7
NUP58-209ENST00000476553 TXKP42681 527 aa10.66□□□□□ -0.7
NUP58-209ENST00000476553 TMEM130Q8N3G9 435 aa10.66□□□□□ -0.7
NUP58-209ENST00000476553 POM121Q96HA1 1249 aa10.66□□□□□ -0.7
NUP58-209ENST00000476553 KIAA1324LA8MWY0 1029 aaPredicted RBP10.65□□□□□ -0.7
NUP58-209ENST00000476553 IDH3AP50213 366 aa10.65□□□□□ -0.7
NUP58-209ENST00000476553 MLLT1Q03111 559 aaPredicted RBP10.65□□□□□ -0.7
NUP58-209ENST00000476553 CHMP7Q8WUX9 453 aaPredicted RBP10.65□□□□□ -0.7
NUP58-209ENST00000476553 IFT43Q96FT9 208 aa10.65□□□□□ -0.7
NUP58-209ENST00000476553 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.7
NUP58-209ENST00000476553 SMG9Q9H0W8 520 aaKnown RBP10.65□□□□□ -0.7
NUP58-209ENST00000476553 F8W735 103 aaPredicted RBP10.64□□□□□ -0.71
NUP58-209ENST00000476553 ERICH6Q7L0X2 663 aa10.64□□□□□ -0.71
NUP58-209ENST00000476553 KRT25Q7Z3Z0 450 aa10.64□□□□□ -0.71
NUP58-209ENST00000476553 NRLP54845 237 aa10.63□□□□□ -0.71
NUP58-209ENST00000476553 RBM19Q9Y4C8 960 aaKnown RBP10.63□□□□□ -0.71
NUP58-209ENST00000476553 ALX3O95076 343 aa10.62□□□□□ -0.71
NUP58-209ENST00000476553 RARAP10276 462 aa10.62□□□□□ -0.71
NUP58-209ENST00000476553 TARSP26639 723 aaKnown RBP10.62□□□□□ -0.71
NUP58-209ENST00000476553 IRAK1P51617 712 aa10.62□□□□□ -0.71
NUP58-209ENST00000476553 SEC13P55735 322 aa10.62□□□□□ -0.71
NUP58-209ENST00000476553 YBX3P16989 372 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUP58-209ENST00000476553 ARSDP51689 593 aa10.61□□□□□ -0.71
NUP58-209ENST00000476553 SRA1Q9HD15 236 aaKnown RBP10.61□□□□□ -0.71
NUP58-209ENST00000476553 MED26O95402 600 aa10.6□□□□□ -0.71
NUP58-209ENST00000476553 HOMEZQ8IX15 550 aa10.6□□□□□ -0.71
NUP58-209ENST00000476553 KLK14Q9P0G3 267 aa10.6□□□□□ -0.71
NUP58-209ENST00000476553 GTF3C3Q9Y5Q9 886 aa10.6□□□□□ -0.71
NUP58-209ENST00000476553 OAS3Q9Y6K5 1087 aaKnown RBP10.6□□□□□ -0.71
NUP58-209ENST00000476553 EIF2AK2P19525 551 aaKnown RBP10.59□□□□□ -0.71
NUP58-209ENST00000476553 IGFBP4P22692 258 aa10.59□□□□□ -0.71
NUP58-209ENST00000476553 GSC2O15499 205 aa10.58□□□□□ -0.72
NUP58-209ENST00000476553 SASH3O75995 380 aa10.58□□□□□ -0.72
NUP58-209ENST00000476553 ARID4AP29374 1257 aaPredicted RBP10.58□□□□□ -0.72
NUP58-209ENST00000476553 RASA1P20936 1047 aa10.57□□□□□ -0.72
NUP58-209ENST00000476553 HDGFL1Q5TGJ6 251 aa10.57□□□□□ -0.72
NUP58-209ENST00000476553 HFE2Q6ZVN8 426 aa10.57□□□□□ -0.72
NUP58-209ENST00000476553 PLD4Q96BZ4 506 aa10.57□□□□□ -0.72
NUP58-209ENST00000476553 TLR7Q9NYK1 1049 aaKnown RBP10.57□□□□□ -0.72
NUP58-209ENST00000476553 RAXQ9Y2V3 346 aa10.57□□□□□ -0.72
NUP58-209ENST00000476553 COBLO75128 1261 aa10.56□□□□□ -0.72
NUP58-209ENST00000476553 TGFB1P01137 390 aa10.56□□□□□ -0.72
NUP58-209ENST00000476553 IGLV1-40P01703 118 aa10.56□□□□□ -0.72
NUP58-209ENST00000476553 HOXD8P13378 290 aaPredicted RBP10.56□□□□□ -0.72
NUP58-209ENST00000476553 GP2P55259 537 aaKnown RBP10.56□□□□□ -0.72
NUP58-209ENST00000476553 SETDB1Q15047 1291 aa10.56□□□□□ -0.72
NUP58-209ENST00000476553 MAP4K3Q8IVH8 894 aa10.56□□□□□ -0.72
NUP58-209ENST00000476553 DCAF11Q8TEB1 546 aa10.56□□□□□ -0.72
NUP58-209ENST00000476553 QTRT2Q9H974 415 aaKnown RBP10.56□□□□□ -0.72
NUP58-209ENST00000476553 PTCD1O75127 700 aaKnown RBP10.55□□□□□ -0.72
NUP58-209ENST00000476553 EGFRP00533 1210 aa10.55□□□□□ -0.72
NUP58-209ENST00000476553 TAL1P17542 331 aaPredicted RBP10.55□□□□□ -0.72
NUP58-209ENST00000476553 DGKZQ13574 1117 aa10.55□□□□□ -0.72
NUP58-209ENST00000476553 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.55□□□□□ -0.72
NUP58-209ENST00000476553 SPINK2P20155 84 aa10.54□□□□□ -0.72
NUP58-209ENST00000476553 LCE1DQ5T752 114 aa10.54□□□□□ -0.72
NUP58-209ENST00000476553 AGGF1Q8N302 714 aaeCLIP10.54□□□□□ -0.72
NUP58-209ENST00000476553 KRTAP4-7Q9BYR0 210 aa10.54□□□□□ -0.72
NUP58-209ENST00000476553 MICAL2O94851 1124 aa10.53□□□□□ -0.72
NUP58-209ENST00000476553 ZDHHC13Q8IUH4 622 aa10.53□□□□□ -0.72
NUP58-209ENST00000476553 RAD21O60216 631 aa10.52□□□□□ -0.73
NUP58-209ENST00000476553 GLB1P16278 677 aa10.52□□□□□ -0.73
NUP58-209ENST00000476553 IL22RA1Q8N6P7 574 aa10.52□□□□□ -0.73
NUP58-209ENST00000476553 MYO19Q96H55 970 aa10.52□□□□□ -0.73
NUP58-209ENST00000476553 SOX18P35713 384 aa10.51□□□□□ -0.73
NUP58-209ENST00000476553 GDF6Q6KF10 455 aaPredicted RBP10.51□□□□□ -0.73
NUP58-209ENST00000476553 UBL7Q96S82 380 aaPredicted RBP10.51□□□□□ -0.73
NUP58-209ENST00000476553 HINFPQ9BQA5 517 aa10.51□□□□□ -0.73
NUP58-209ENST00000476553 RTCBQ9Y3I0 505 aaKnown RBP10.51□□□□□ -0.73
NUP58-209ENST00000476553 MAFBQ9Y5Q3 323 aaPredicted RBP10.51□□□□□ -0.73
NUP58-209ENST00000476553 LOC102724428A0A0B4J2F2 783 aa10.5□□□□□ -0.73
NUP58-209ENST00000476553 J3QW42 95 aa10.5□□□□□ -0.73
NUP58-209ENST00000476553 OPLAHO14841 1288 aa10.5□□□□□ -0.73
NUP58-209ENST00000476553 ADAMTS4O75173 837 aa10.5□□□□□ -0.73
NUP58-209ENST00000476553 SIK1P57059 783 aa10.5□□□□□ -0.73
NUP58-209ENST00000476553 RNF114Q9Y508 228 aa10.5□□□□□ -0.73
NUP58-209ENST00000476553 ARID1BQ8NFD5 2236 aaPredicted RBP10.5□□□□□ -0.73
NUP58-209ENST00000476553 LGR5O75473 907 aa10.49□□□□□ -0.73
NUP58-209ENST00000476553 PTK7Q13308 1070 aa10.49□□□□□ -0.73
NUP58-209ENST00000476553 CRTC2Q53ET0 693 aaPredicted RBP10.49□□□□□ -0.73
NUP58-209ENST00000476553 ARMC10Q8N2F6 343 aa10.49□□□□□ -0.73
NUP58-209ENST00000476553 STOML1Q9UBI4 398 aa10.49□□□□□ -0.73
NUP58-209ENST00000476553 DPYDQ12882 1025 aa10.48□□□□□ -0.73
NUP58-209ENST00000476553 NSUN5Q96P11 429 aaKnown RBP10.48□□□□□ -0.73
NUP58-209ENST00000476553 USP20Q9Y2K6 914 aa10.48□□□□□ -0.73
NUP58-209ENST00000476553 DHX15O43143 795 aaKnown RBP10.47□□□□□ -0.73
NUP58-209ENST00000476553 FOXO3O43524 673 aa10.47□□□□□ -0.73
NUP58-209ENST00000476553 MMP20O60882 483 aa10.47□□□□□ -0.73
NUP58-209ENST00000476553 XYLBO75191 536 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms