RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CDC37L1Q7L3B6 337 aa21.78■■□□□ 1.08
APOBEC3F-203ENST00000476513 ZIC5Q96T25 663 aa21.78■■□□□ 1.08
APOBEC3F-203ENST00000476513 THUMPD2Q9BTF0 503 aaKnown RBP21.78■■□□□ 1.08
APOBEC3F-203ENST00000476513 ERBB4Q15303 1308 aa21.78■■□□□ 1.08
APOBEC3F-203ENST00000476513 BBOX1O75936 387 aa21.77■■□□□ 1.08
APOBEC3F-203ENST00000476513 TNIP1Q15025 636 aa21.77■■□□□ 1.08
APOBEC3F-203ENST00000476513 SP8Q8IXZ3 490 aa21.77■■□□□ 1.08
APOBEC3F-203ENST00000476513 MPNDQ8N594 471 aa21.77■■□□□ 1.08
APOBEC3F-203ENST00000476513 CASP8AP2Q9UKL3 1982 aa21.76■■□□□ 1.07
APOBEC3F-203ENST00000476513 SHTN1A0MZ66 631 aa21.76■■□□□ 1.07
APOBEC3F-203ENST00000476513 NOGQ13253 232 aa21.76■■□□□ 1.07
APOBEC3F-203ENST00000476513 LRP10Q7Z4F1 713 aa21.76■■□□□ 1.07
APOBEC3F-203ENST00000476513 PCDH10Q9P2E7 1040 aa21.76■■□□□ 1.07
APOBEC3F-203ENST00000476513 NEFMP07197 916 aa21.75■■□□□ 1.07
APOBEC3F-203ENST00000476513 PDIA6Q15084 440 aa21.75■■□□□ 1.07
APOBEC3F-203ENST00000476513 CNOT7Q9UIV1 285 aaKnown RBP21.75■■□□□ 1.07
APOBEC3F-203ENST00000476513 YDJCA8MPS7 323 aa21.74■■□□□ 1.07
APOBEC3F-203ENST00000476513 USP48Q86UV5 1035 aa21.74■■□□□ 1.07
APOBEC3F-203ENST00000476513 HCLS1P14317 486 aaPredicted RBP21.73■■□□□ 1.07
APOBEC3F-203ENST00000476513 HUNKP57058 714 aa21.73■■□□□ 1.07
APOBEC3F-203ENST00000476513 NFE2L2Q16236 605 aa21.73■■□□□ 1.07
APOBEC3F-203ENST00000476513 DLK2Q6UY11 383 aa21.73■■□□□ 1.07
APOBEC3F-203ENST00000476513 PLEKHF1Q96S99 279 aa21.73■■□□□ 1.07
APOBEC3F-203ENST00000476513 H7C1D1 291 aa21.72■■□□□ 1.07
APOBEC3F-203ENST00000476513 MICALL2Q8IY33 904 aa21.72■■□□□ 1.07
APOBEC3F-203ENST00000476513 GRAPQ13588 217 aa21.71■■□□□ 1.07
APOBEC3F-203ENST00000476513 PROSER3Q2NL68 480 aa21.71■■□□□ 1.07
APOBEC3F-203ENST00000476513 DDX46Q7L014 1031 aaKnown RBP21.71■■□□□ 1.07
APOBEC3F-203ENST00000476513 GRAPLQ8TC17 118 aaPredicted RBP21.71■■□□□ 1.07
APOBEC3F-203ENST00000476513 ANXA1P04083 346 aa21.7■■□□□ 1.06
APOBEC3F-203ENST00000476513 EIF2S2P20042 333 aaKnown RBP21.7■■□□□ 1.06
APOBEC3F-203ENST00000476513 NLRP10Q86W26 655 aa21.7■■□□□ 1.06
APOBEC3F-203ENST00000476513 ZBTB12Q9Y330 459 aaPredicted RBP21.7■■□□□ 1.06
APOBEC3F-203ENST00000476513 DLG5Q8TDM6 1919 aa21.7■■□□□ 1.06
APOBEC3F-203ENST00000476513 FAM155AB1AL88 458 aaPredicted RBP21.69■■□□□ 1.06
APOBEC3F-203ENST00000476513 SAMD7Q7Z3H4 446 aa21.69■■□□□ 1.06
APOBEC3F-203ENST00000476513 DPF2Q92785 391 aa21.69■■□□□ 1.06
APOBEC3F-203ENST00000476513 TSPYL4Q9UJ04 414 aa21.69■■□□□ 1.06
APOBEC3F-203ENST00000476513 RGMBQ6NW40 437 aa21.68■■□□□ 1.06
APOBEC3F-203ENST00000476513 KRT26Q7Z3Y9 468 aa21.68■■□□□ 1.06
APOBEC3F-203ENST00000476513 DUOX1Q9NRD9 1551 aa21.68■■□□□ 1.06
APOBEC3F-203ENST00000476513 PSMD14O00487 310 aa21.67■■□□□ 1.06
APOBEC3F-203ENST00000476513 HSP90AB3PQ58FF7 597 aa21.67■■□□□ 1.06
APOBEC3F-203ENST00000476513 GBA2Q9HCG7 927 aaPredicted RBP21.67■■□□□ 1.06
APOBEC3F-203ENST00000476513 TRMT112Q9UI30 125 aaKnown RBP21.67■■□□□ 1.06
APOBEC3F-203ENST00000476513 PDE4DIPQ5VU43 2346 aa21.66■■□□□ 1.06
APOBEC3F-203ENST00000476513 SH3TC1Q8TE82 1336 aa21.66■■□□□ 1.06
APOBEC3F-203ENST00000476513 EGFRP00533 1210 aa21.66■■□□□ 1.06
APOBEC3F-203ENST00000476513 KIF23Q02241 960 aaPredicted RBP21.66■■□□□ 1.06
APOBEC3F-203ENST00000476513 TBC1D10BQ4KMP7 808 aaPredicted RBP21.66■■□□□ 1.06
APOBEC3F-203ENST00000476513 COPS6Q7L5N1 327 aa21.66■■□□□ 1.06
APOBEC3F-203ENST00000476513 TMC4Q7Z404 712 aa21.66■■□□□ 1.06
APOBEC3F-203ENST00000476513 SAGE1Q9NXZ1 904 aa21.66■■□□□ 1.06
APOBEC3F-203ENST00000476513 LAMB2P55268 1798 aa21.66■■□□□ 1.06
APOBEC3F-203ENST00000476513 AIMP1Q12904 312 aaKnown RBP21.65■■□□□ 1.06
APOBEC3F-203ENST00000476513 TCIRG1Q13488 830 aa21.65■■□□□ 1.06
APOBEC3F-203ENST00000476513 WASHC4Q2M389 1173 aa21.65■■□□□ 1.06
APOBEC3F-203ENST00000476513 C2orf69Q8N8R5 385 aa21.65■■□□□ 1.06
APOBEC3F-203ENST00000476513 CCDC102AQ96A19 550 aa21.65■■□□□ 1.06
APOBEC3F-203ENST00000476513 ANKRD36CQ5JPF3 1778 aa21.64■■□□□ 1.06
APOBEC3F-203ENST00000476513 ADM5C9JUS6 153 aa21.64■■□□□ 1.05
APOBEC3F-203ENST00000476513 XAGE3Q8WTP9 111 aa21.64■■□□□ 1.05
APOBEC3F-203ENST00000476513 DBNDD1Q9H9R9 158 aa21.64■■□□□ 1.05
APOBEC3F-203ENST00000476513 MAPK8IP3Q9UPT6 1336 aa21.63■■□□□ 1.05
APOBEC3F-203ENST00000476513 ZNF157P51786 506 aaPredicted RBP21.63■■□□□ 1.05
APOBEC3F-203ENST00000476513 SOX10P56693 466 aa21.63■■□□□ 1.05
APOBEC3F-203ENST00000476513 NECTIN2Q92692 538 aa21.63■■□□□ 1.05
APOBEC3F-203ENST00000476513 RNF186Q9NXI6 227 aa21.63■■□□□ 1.05
APOBEC3F-203ENST00000476513 RIMBP2O15034 1052 aa21.62■■□□□ 1.05
APOBEC3F-203ENST00000476513 TRPA1O75762 1119 aa21.62■■□□□ 1.05
APOBEC3F-203ENST00000476513 RBM26Q5T8P6 1007 aaKnown RBP21.62■■□□□ 1.05
APOBEC3F-203ENST00000476513 DCPSQ96C86 337 aaKnown RBP21.62■■□□□ 1.05
APOBEC3F-203ENST00000476513 KCNQ5Q9NR82 932 aa21.62■■□□□ 1.05
APOBEC3F-203ENST00000476513 NSFL1CQ9UNZ2 370 aaKnown RBP21.62■■□□□ 1.05
APOBEC3F-203ENST00000476513 RPS12P25398 132 aaKnown RBP21.61■■□□□ 1.05
APOBEC3F-203ENST00000476513 ZNF428Q96B54 188 aa21.61■■□□□ 1.05
APOBEC3F-203ENST00000476513 PNNQ9H307 717 aaKnown RBP21.61■■□□□ 1.05
APOBEC3F-203ENST00000476513 LRRC37AA6NMS7 1700 aa21.6■■□□□ 1.05
APOBEC3F-203ENST00000476513 CELF1Q92879 486 aaKnown RBP21.6■■□□□ 1.05
APOBEC3F-203ENST00000476513 POLLQ9UGP5 575 aa21.6■■□□□ 1.05
APOBEC3F-203ENST00000476513 TAF1P21675 1872 aa21.6■■□□□ 1.05
APOBEC3F-203ENST00000476513 RTL9Q8NET4 1388 aa21.6■■□□□ 1.05
APOBEC3F-203ENST00000476513 C6orf229H3BNL8 230 aa21.59■■□□□ 1.05
APOBEC3F-203ENST00000476513 ECE2O60344 883 aa21.59■■□□□ 1.05
APOBEC3F-203ENST00000476513 SLC10A3P09131 477 aa21.59■■□□□ 1.05
APOBEC3F-203ENST00000476513 GPSM2P81274 684 aa21.59■■□□□ 1.05
APOBEC3F-203ENST00000476513 DOK7Q18PE1 504 aa21.59■■□□□ 1.05
APOBEC3F-203ENST00000476513 CSRNP1Q96S65 589 aa21.59■■□□□ 1.05
APOBEC3F-203ENST00000476513 BABAM1Q9NWV8 329 aa21.59■■□□□ 1.05
APOBEC3F-203ENST00000476513 KIF4BQ2VIQ3 1234 aa21.58■■□□□ 1.05
APOBEC3F-203ENST00000476513 RIPK4P57078 832 aa21.57■■□□□ 1.04
APOBEC3F-203ENST00000476513 SF3B3Q15393 1217 aaKnown RBP21.57■■□□□ 1.04
APOBEC3F-203ENST00000476513 GGA3Q9NZ52 723 aa21.57■■□□□ 1.04
APOBEC3F-203ENST00000476513 ASTN2O75129 1339 aaPredicted RBP21.56■■□□□ 1.04
APOBEC3F-203ENST00000476513 CTU1Q7Z7A3 348 aaKnown RBP21.56■■□□□ 1.04
APOBEC3F-203ENST00000476513 SULF1Q8IWU6 871 aa21.56■■□□□ 1.04
APOBEC3F-203ENST00000476513 FAM89AQ96GI7 184 aa21.56■■□□□ 1.04
APOBEC3F-203ENST00000476513 EYA3Q99504 573 aa21.56■■□□□ 1.04
APOBEC3F-203ENST00000476513 VIL1P09327 827 aaKnown RBP21.55■■□□□ 1.04
APOBEC3F-203ENST00000476513 TBC1D16Q8TBP0 767 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms