RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
PSMB4-204ENST00000476467 HMMRO75330 724 aa16.47■□□□□ 0.23
PSMB4-204ENST00000476467 CENPQQ7L2Z9 268 aaPredicted RBP16.47■□□□□ 0.23
PSMB4-204ENST00000476467 SIRT2Q8IXJ6 389 aa16.47■□□□□ 0.23
PSMB4-204ENST00000476467 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
PSMB4-204ENST00000476467 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
PSMB4-204ENST00000476467 SRGAP3O43295 1099 aa16.46■□□□□ 0.23
PSMB4-204ENST00000476467 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
PSMB4-204ENST00000476467 NLRP3Q96P20 1036 aa16.46■□□□□ 0.23
PSMB4-204ENST00000476467 C10orf71Q711Q0 1435 aa16.46■□□□□ 0.23
PSMB4-204ENST00000476467 HDAC1Q13547 482 aaPredicted RBP16.46■□□□□ 0.22
PSMB4-204ENST00000476467 POLA2Q14181 598 aa16.46■□□□□ 0.22
PSMB4-204ENST00000476467 CCDC152Q4G0S7 254 aa16.46■□□□□ 0.22
PSMB4-204ENST00000476467 C3orf67Q6ZVT6 689 aa16.46■□□□□ 0.22
PSMB4-204ENST00000476467 SSH3Q8TE77 659 aa16.46■□□□□ 0.22
PSMB4-204ENST00000476467 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.22
PSMB4-204ENST00000476467 RTL9Q8NET4 1388 aa16.46■□□□□ 0.22
PSMB4-204ENST00000476467 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
PSMB4-204ENST00000476467 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
PSMB4-204ENST00000476467 FAM161AQ3B820 660 aa16.44■□□□□ 0.22
PSMB4-204ENST00000476467 RWDD1Q9H446 243 aaPredicted RBP16.44■□□□□ 0.22
PSMB4-204ENST00000476467 PDE4AP27815 886 aa16.44■□□□□ 0.22
PSMB4-204ENST00000476467 GREM2Q9H772 168 aa16.44■□□□□ 0.22
PSMB4-204ENST00000476467 KIF13BQ9NQT8 1826 aa16.43■□□□□ 0.22
PSMB4-204ENST00000476467 KLRG2A4D1S0 409 aaPredicted RBP16.43■□□□□ 0.22
PSMB4-204ENST00000476467 CRY2Q49AN0 593 aa16.43■□□□□ 0.22
PSMB4-204ENST00000476467 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
PSMB4-204ENST00000476467 PDE6BP35913 854 aa16.42■□□□□ 0.22
PSMB4-204ENST00000476467 PTGER2P43116 358 aa16.42■□□□□ 0.22
PSMB4-204ENST00000476467 CCDC57Q2TAC2 916 aa16.42■□□□□ 0.22
PSMB4-204ENST00000476467 BACH2Q9BYV9 841 aa16.42■□□□□ 0.22
PSMB4-204ENST00000476467 SPON1Q9HCB6 807 aa16.42■□□□□ 0.22
PSMB4-204ENST00000476467 COL11A2P13942 1736 aaPredicted RBP16.42■□□□□ 0.22
PSMB4-204ENST00000476467 LRP5O75197 1615 aa16.42■□□□□ 0.22
PSMB4-204ENST00000476467 ITGA6P23229 1130 aa16.42■□□□□ 0.22
PSMB4-204ENST00000476467 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
PSMB4-204ENST00000476467 IFIT5Q13325 482 aaKnown RBP16.42■□□□□ 0.22
PSMB4-204ENST00000476467 ANKRD18BA2A2Z9 1011 aa16.41■□□□□ 0.22
PSMB4-204ENST00000476467 ANP32AP39687 249 aaKnown RBP16.41■□□□□ 0.22
PSMB4-204ENST00000476467 SKAP1Q86WV1 359 aa16.41■□□□□ 0.22
PSMB4-204ENST00000476467 IGHDP01880 384 aa16.41■□□□□ 0.22
PSMB4-204ENST00000476467 ERICH6Q7L0X2 663 aa16.41■□□□□ 0.22
PSMB4-204ENST00000476467 PDZRN3Q9UPQ7 1066 aa16.41■□□□□ 0.22
PSMB4-204ENST00000476467 PTPN12Q05209 780 aaKnown RBP16.4■□□□□ 0.22
PSMB4-204ENST00000476467 RPGRQ92834 1020 aaKnown RBP16.4■□□□□ 0.22
PSMB4-204ENST00000476467 COPRSQ9NQ92 184 aa16.4■□□□□ 0.22
PSMB4-204ENST00000476467 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
PSMB4-204ENST00000476467 DDX46Q7L014 1031 aaKnown RBP16.39■□□□□ 0.21
PSMB4-204ENST00000476467 CDC5LQ99459 802 aaKnown RBP16.39■□□□□ 0.21
PSMB4-204ENST00000476467 SEC31BQ9NQW1 1179 aa16.39■□□□□ 0.21
PSMB4-204ENST00000476467 DCTPP1Q9H773 170 aa16.39■□□□□ 0.21
PSMB4-204ENST00000476467 PA2G4Q9UQ80 394 aaKnown RBP16.39■□□□□ 0.21
PSMB4-204ENST00000476467 HOXA10P31260 410 aaPredicted RBP16.38■□□□□ 0.21
PSMB4-204ENST00000476467 KLHDC4Q8TBB5 520 aa16.38■□□□□ 0.21
PSMB4-204ENST00000476467 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
PSMB4-204ENST00000476467 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
PSMB4-204ENST00000476467 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
PSMB4-204ENST00000476467 SPEF2Q9C093 1822 aa16.38■□□□□ 0.21
PSMB4-204ENST00000476467 DLEC1Q9Y238 1755 aa16.38■□□□□ 0.21
PSMB4-204ENST00000476467 SURF6O75683 361 aaKnown RBP16.38■□□□□ 0.21
PSMB4-204ENST00000476467 SRGNP10124 158 aa16.38■□□□□ 0.21
PSMB4-204ENST00000476467 NPR1P16066 1061 aa16.38■□□□□ 0.21
PSMB4-204ENST00000476467 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
PSMB4-204ENST00000476467 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
PSMB4-204ENST00000476467 COL4A1P02462 1669 aa16.37■□□□□ 0.21
PSMB4-204ENST00000476467 TAF1P21675 1872 aa16.37■□□□□ 0.21
PSMB4-204ENST00000476467 HSP90AB4PQ58FF6 505 aa16.37■□□□□ 0.21
PSMB4-204ENST00000476467 SMC5Q8IY18 1101 aa16.37■□□□□ 0.21
PSMB4-204ENST00000476467 ZNF594Q96JF6 807 aaPredicted RBP16.37■□□□□ 0.21
PSMB4-204ENST00000476467 CRAMP1Q96RY5 1269 aa16.37■□□□□ 0.21
PSMB4-204ENST00000476467 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
PSMB4-204ENST00000476467 KIAA1551Q9HCM1 1747 aa16.37■□□□□ 0.21
PSMB4-204ENST00000476467 H0YIN7 160 aa16.36■□□□□ 0.21
PSMB4-204ENST00000476467 IGHMBP2P38935 993 aaKnown RBP16.36■□□□□ 0.21
PSMB4-204ENST00000476467 GRAPQ13588 217 aa16.36■□□□□ 0.21
PSMB4-204ENST00000476467 ANKRD18AQ8IVF6 992 aa16.36■□□□□ 0.21
PSMB4-204ENST00000476467 GRAPLQ8TC17 118 aaPredicted RBP16.36■□□□□ 0.21
PSMB4-204ENST00000476467 MASTLQ96GX5 879 aa16.36■□□□□ 0.21
PSMB4-204ENST00000476467 SIL1Q9H173 461 aa16.36■□□□□ 0.21
PSMB4-204ENST00000476467 EXOC6BQ9Y2D4 811 aa16.36■□□□□ 0.21
PSMB4-204ENST00000476467 CIAO1O76071 339 aa16.36■□□□□ 0.21
PSMB4-204ENST00000476467 CD2APQ9Y5K6 639 aa16.36■□□□□ 0.21
PSMB4-204ENST00000476467 EYA2O00167 538 aa16.35■□□□□ 0.21
PSMB4-204ENST00000476467 G3BP1Q13283 466 aaKnown RBP eCLIP16.35■□□□□ 0.211e-6■■■□□ 15.7
PSMB4-204ENST00000476467 STYK1Q6J9G0 422 aa16.35■□□□□ 0.21
PSMB4-204ENST00000476467 CELF1Q92879 486 aaKnown RBP16.35■□□□□ 0.21
PSMB4-204ENST00000476467 RAB11FIP3O75154 756 aa16.34■□□□□ 0.21
PSMB4-204ENST00000476467 RPS8P62241 208 aaKnown RBP16.34■□□□□ 0.21
PSMB4-204ENST00000476467 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
PSMB4-204ENST00000476467 LDHAL6AQ6ZMR3 332 aa16.34■□□□□ 0.21
PSMB4-204ENST00000476467 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
PSMB4-204ENST00000476467 MPHOSPH8Q99549 860 aa16.34■□□□□ 0.21
PSMB4-204ENST00000476467 CHRNA5P30532 468 aa16.34■□□□□ 0.21
PSMB4-204ENST00000476467 TGFB2P61812 414 aa16.34■□□□□ 0.21
PSMB4-204ENST00000476467 ATG9AQ7Z3C6 839 aa16.34■□□□□ 0.21
PSMB4-204ENST00000476467 PUS3Q9BZE2 481 aaKnown RBP16.34■□□□□ 0.21
PSMB4-204ENST00000476467 CNNM1Q9NRU3 951 aa16.34■□□□□ 0.21
PSMB4-204ENST00000476467 IL15P40933 162 aaPredicted RBP16.33■□□□□ 0.21
PSMB4-204ENST00000476467 LRRC24Q50LG9 513 aa16.33■□□□□ 0.21
PSMB4-204ENST00000476467 BSDC1Q9NW68 430 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms