RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
TMEM254-211ENST00000476173 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
TMEM254-211ENST00000476173 SUCLG2Q96I99 432 aa12.3□□□□□ -0.44
TMEM254-211ENST00000476173 PLA2G12BQ9BX93 195 aa12.3□□□□□ -0.44
TMEM254-211ENST00000476173 SRCAPQ6ZRS2 3230 aa12.29□□□□□ -0.44
TMEM254-211ENST00000476173 ST5P78524 1137 aa12.29□□□□□ -0.44
TMEM254-211ENST00000476173 EPHA10Q5JZY3 1008 aa12.29□□□□□ -0.44
TMEM254-211ENST00000476173 EXOC6Q8TAG9 804 aa12.29□□□□□ -0.44
TMEM254-211ENST00000476173 CHMP4BQ9H444 224 aaKnown RBP12.29□□□□□ -0.44
TMEM254-211ENST00000476173 DDX60Q8IY21 1712 aaKnown RBP12.28□□□□□ -0.44
TMEM254-211ENST00000476173 PDE8AO60658 829 aa12.28□□□□□ -0.44
TMEM254-211ENST00000476173 GNAI2P04899 355 aa12.28□□□□□ -0.44
TMEM254-211ENST00000476173 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
TMEM254-211ENST00000476173 FOXO4P98177 505 aa12.28□□□□□ -0.44
TMEM254-211ENST00000476173 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
TMEM254-211ENST00000476173 BRIP1Q9BX63 1249 aa12.28□□□□□ -0.44
TMEM254-211ENST00000476173 HDAC5Q9UQL6 1122 aa12.28□□□□□ -0.44
TMEM254-211ENST00000476173 LRRFIP2Q9Y608 721 aaKnown RBP12.28□□□□□ -0.44
TMEM254-211ENST00000476173 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
TMEM254-211ENST00000476173 ANKRD31Q8N7Z5 1873 aa12.27□□□□□ -0.44
TMEM254-211ENST00000476173 KLRG2A4D1S0 409 aaPredicted RBP12.27□□□□□ -0.45
TMEM254-211ENST00000476173 CTSWP56202 376 aa12.27□□□□□ -0.45
TMEM254-211ENST00000476173 RABL6Q3YEC7 729 aaPredicted RBP12.27□□□□□ -0.45
TMEM254-211ENST00000476173 KLHL34Q8N239 644 aa12.27□□□□□ -0.45
TMEM254-211ENST00000476173 ANKRD44Q8N8A2 993 aa12.27□□□□□ -0.45
TMEM254-211ENST00000476173 TTLL11Q8NHH1 800 aa12.27□□□□□ -0.45
TMEM254-211ENST00000476173 NLRP3Q96P20 1036 aa12.27□□□□□ -0.45
TMEM254-211ENST00000476173 BICC1Q9H694 974 aaKnown RBP12.27□□□□□ -0.45
TMEM254-211ENST00000476173 C1orf115Q9H7X2 142 aa12.27□□□□□ -0.45
TMEM254-211ENST00000476173 LAMB2P55268 1798 aa12.27□□□□□ -0.45
TMEM254-211ENST00000476173 C10orf71Q711Q0 1435 aa12.27□□□□□ -0.45
TMEM254-211ENST00000476173 CSF1RP07333 972 aa12.26□□□□□ -0.45
TMEM254-211ENST00000476173 SF3B3Q15393 1217 aaKnown RBP12.26□□□□□ -0.45
TMEM254-211ENST00000476173 TNRC6CQ9HCJ0 1690 aaKnown RBP12.26□□□□□ -0.45
TMEM254-211ENST00000476173 MYH3P11055 1940 aa12.25□□□□□ -0.45
TMEM254-211ENST00000476173 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
TMEM254-211ENST00000476173 PDE6BP35913 854 aa12.25□□□□□ -0.45
TMEM254-211ENST00000476173 AAMPQ13685 434 aa12.25□□□□□ -0.45
TMEM254-211ENST00000476173 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
TMEM254-211ENST00000476173 LMBR1LQ6UX01 489 aa12.25□□□□□ -0.45
TMEM254-211ENST00000476173 KIF13BQ9NQT8 1826 aa12.25□□□□□ -0.45
TMEM254-211ENST00000476173 NEFLP07196 543 aa12.24□□□□□ -0.45
TMEM254-211ENST00000476173 SRGNP10124 158 aa12.24□□□□□ -0.45
TMEM254-211ENST00000476173 MTX1Q13505 466 aa12.24□□□□□ -0.45
TMEM254-211ENST00000476173 CEP85Q6P2H3 762 aa12.24□□□□□ -0.45
TMEM254-211ENST00000476173 CCDC85AQ96PX6 553 aaPredicted RBP12.24□□□□□ -0.45
TMEM254-211ENST00000476173 GREM2Q9H772 168 aa12.24□□□□□ -0.45
TMEM254-211ENST00000476173 CD2APQ9Y5K6 639 aa12.24□□□□□ -0.45
TMEM254-211ENST00000476173 RTL9Q8NET4 1388 aa12.23□□□□□ -0.45
TMEM254-211ENST00000476173 ATP8B2P98198 1209 aa12.23□□□□□ -0.45
TMEM254-211ENST00000476173 FAM161AQ3B820 660 aa12.23□□□□□ -0.45
TMEM254-211ENST00000476173 CCDC152Q4G0S7 254 aa12.23□□□□□ -0.45
TMEM254-211ENST00000476173 C2CD5Q86YS7 1000 aa12.23□□□□□ -0.45
TMEM254-211ENST00000476173 SIRT2Q8IXJ6 389 aa12.23□□□□□ -0.45
TMEM254-211ENST00000476173 PDZRN3Q9UPQ7 1066 aa12.23□□□□□ -0.45
TMEM254-211ENST00000476173 PCDHB15Q9Y5E8 787 aa12.23□□□□□ -0.45
TMEM254-211ENST00000476173 PNMA6EA0A0J9YXQ4 647 aa12.22□□□□□ -0.45
TMEM254-211ENST00000476173 H0YIN7 160 aa12.22□□□□□ -0.45
TMEM254-211ENST00000476173 NPR1P16066 1061 aa12.22□□□□□ -0.45
TMEM254-211ENST00000476173 CHRNA5P30532 468 aa12.22□□□□□ -0.45
TMEM254-211ENST00000476173 HOXA10P31260 410 aaPredicted RBP12.22□□□□□ -0.45
TMEM254-211ENST00000476173 TGFB2P61812 414 aa12.22□□□□□ -0.45
TMEM254-211ENST00000476173 RPAP2Q8IXW5 612 aaPredicted RBP12.22□□□□□ -0.45
TMEM254-211ENST00000476173 SEC31BQ9NQW1 1179 aa12.22□□□□□ -0.45
TMEM254-211ENST00000476173 PPP1R1BQ9UD71 204 aaPredicted RBP12.22□□□□□ -0.45
TMEM254-211ENST00000476173 CHMP3Q9Y3E7 222 aa12.22□□□□□ -0.45
TMEM254-211ENST00000476173 COL11A2P13942 1736 aaPredicted RBP12.21□□□□□ -0.45
TMEM254-211ENST00000476173 SRGAP3O43295 1099 aa12.21□□□□□ -0.45
TMEM254-211ENST00000476173 DPEP1P16444 411 aa12.21□□□□□ -0.45
TMEM254-211ENST00000476173 KCNA3P22001 575 aa12.21□□□□□ -0.45
TMEM254-211ENST00000476173 ITGA6P23229 1130 aa12.21□□□□□ -0.45
TMEM254-211ENST00000476173 RFX5P48382 616 aaPredicted RBP12.21□□□□□ -0.45
TMEM254-211ENST00000476173 IFIT5Q13325 482 aaKnown RBP12.21□□□□□ -0.45
TMEM254-211ENST00000476173 SSH3Q8TE77 659 aa12.21□□□□□ -0.45
TMEM254-211ENST00000476173 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
TMEM254-211ENST00000476173 MASTLQ96GX5 879 aa12.21□□□□□ -0.45
TMEM254-211ENST00000476173 CRAMP1Q96RY5 1269 aa12.21□□□□□ -0.45
TMEM254-211ENST00000476173 FHDC1Q9C0D6 1143 aaPredicted RBP12.21□□□□□ -0.45
TMEM254-211ENST00000476173 TAF1P21675 1872 aa12.21□□□□□ -0.46
TMEM254-211ENST00000476173 KIAA1551Q9HCM1 1747 aa12.2□□□□□ -0.46
TMEM254-211ENST00000476173 LRP5O75197 1615 aa12.2□□□□□ -0.46
TMEM254-211ENST00000476173 A0A0G2JLW4 131 aa12.2□□□□□ -0.46
TMEM254-211ENST00000476173 ANKRD18BA2A2Z9 1011 aa12.2□□□□□ -0.46
TMEM254-211ENST00000476173 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
TMEM254-211ENST00000476173 STYK1Q6J9G0 422 aa12.2□□□□□ -0.46
TMEM254-211ENST00000476173 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
TMEM254-211ENST00000476173 RBM17Q96I25 401 aaKnown RBP12.2□□□□□ -0.46
TMEM254-211ENST00000476173 COL4A1P02462 1669 aa12.19□□□□□ -0.46
TMEM254-211ENST00000476173 PTPN12Q05209 780 aaKnown RBP12.19□□□□□ -0.46
TMEM254-211ENST00000476173 ERICH6BQ5W0A0 696 aa12.19□□□□□ -0.46
TMEM254-211ENST00000476173 NLGN2Q8NFZ4 835 aa12.19□□□□□ -0.46
TMEM254-211ENST00000476173 KLHDC4Q8TBB5 520 aa12.19□□□□□ -0.46
TMEM254-211ENST00000476173 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
TMEM254-211ENST00000476173 CELF1Q92879 486 aaKnown RBP12.19□□□□□ -0.46
TMEM254-211ENST00000476173 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.46
TMEM254-211ENST00000476173 ZNF594Q96JF6 807 aaPredicted RBP12.19□□□□□ -0.46
TMEM254-211ENST00000476173 CDC5LQ99459 802 aaKnown RBP12.19□□□□□ -0.46
TMEM254-211ENST00000476173 DLEC1Q9Y238 1755 aa12.18□□□□□ -0.46
TMEM254-211ENST00000476173 HMMRO75330 724 aa12.18□□□□□ -0.46
TMEM254-211ENST00000476173 ALDH1B1P30837 517 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms