RNA–Protein interactions for RNA: ENST00000475863.5

PCGF1-204, Transcript of polycomb group ring finger 1, humanhuman

TSL 1 (best)

Gene PCGF1, Length 1,056 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1-204ENST00000475863 CHMP4BQ9H444 224 aaKnown RBP17.28■□□□□ 0.36
PCGF1-204ENST00000475863 TNRC6CQ9HCJ0 1690 aaKnown RBP17.28■□□□□ 0.36
PCGF1-204ENST00000475863 GNAI3P08754 354 aa17.27■□□□□ 0.36
PCGF1-204ENST00000475863 HOXA10P31260 410 aaPredicted RBP17.27■□□□□ 0.36
PCGF1-204ENST00000475863 SF3B3Q15393 1217 aaKnown RBP17.27■□□□□ 0.36
PCGF1-204ENST00000475863 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
PCGF1-204ENST00000475863 GPBP1L1Q9HC44 474 aaPredicted RBP17.27■□□□□ 0.36
PCGF1-204ENST00000475863 UTYO14607 1347 aa17.26■□□□□ 0.35
PCGF1-204ENST00000475863 UBTFL1P0CB47 393 aaPredicted RBP17.26■□□□□ 0.35
PCGF1-204ENST00000475863 HSP90B1P14625 803 aaKnown RBP17.26■□□□□ 0.35
PCGF1-204ENST00000475863 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
PCGF1-204ENST00000475863 TTLL6Q8N841 843 aa17.26■□□□□ 0.35
PCGF1-204ENST00000475863 PLA2G12BQ9BX93 195 aa17.26■□□□□ 0.35
PCGF1-204ENST00000475863 HDAC5Q9UQL6 1122 aa17.26■□□□□ 0.35
PCGF1-204ENST00000475863 COL11A2P13942 1736 aaPredicted RBP17.26■□□□□ 0.35
PCGF1-204ENST00000475863 BRCA1P38398 1863 aaKnown RBP17.26■□□□□ 0.35
PCGF1-204ENST00000475863 DDX60Q8IY21 1712 aaKnown RBP17.25■□□□□ 0.35
PCGF1-204ENST00000475863 ZBTB7BO15156 539 aaPredicted RBP17.25■□□□□ 0.35
PCGF1-204ENST00000475863 PDE8AO60658 829 aa17.25■□□□□ 0.35
PCGF1-204ENST00000475863 CNKSR1Q969H4 720 aa17.25■□□□□ 0.35
PCGF1-204ENST00000475863 CRBNQ96SW2 442 aa17.25■□□□□ 0.35
PCGF1-204ENST00000475863 MEIS3Q99687 375 aa17.25■□□□□ 0.35
PCGF1-204ENST00000475863 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
PCGF1-204ENST00000475863 NBPF7P0C2Y1 421 aaPredicted RBP17.24■□□□□ 0.35
PCGF1-204ENST00000475863 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
PCGF1-204ENST00000475863 RBM17Q96I25 401 aaKnown RBP17.24■□□□□ 0.35
PCGF1-204ENST00000475863 CRAMP1Q96RY5 1269 aa17.24■□□□□ 0.35
PCGF1-204ENST00000475863 LAMB2P55268 1798 aa17.24■□□□□ 0.35
PCGF1-204ENST00000475863 DLEC1Q9Y238 1755 aa17.24■□□□□ 0.35
PCGF1-204ENST00000475863 MYH3P11055 1940 aa17.23■□□□□ 0.35
PCGF1-204ENST00000475863 NEFLP07196 543 aa17.23■□□□□ 0.35
PCGF1-204ENST00000475863 ALDH1B1P30837 517 aa17.23■□□□□ 0.35
PCGF1-204ENST00000475863 IRX6P78412 446 aaPredicted RBP17.23■□□□□ 0.35
PCGF1-204ENST00000475863 FOXO4P98177 505 aa17.23■□□□□ 0.35
PCGF1-204ENST00000475863 RPGRQ92834 1020 aaKnown RBP17.23■□□□□ 0.35
PCGF1-204ENST00000475863 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
PCGF1-204ENST00000475863 GNAI2P04899 355 aa17.22■□□□□ 0.35
PCGF1-204ENST00000475863 CSF1RP07333 972 aa17.22■□□□□ 0.35
PCGF1-204ENST00000475863 CTSWP56202 376 aa17.22■□□□□ 0.35
PCGF1-204ENST00000475863 EPHA10Q5JZY3 1008 aa17.22■□□□□ 0.35
PCGF1-204ENST00000475863 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
PCGF1-204ENST00000475863 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
PCGF1-204ENST00000475863 SUCLG2Q96I99 432 aa17.22■□□□□ 0.35
PCGF1-204ENST00000475863 SLX4Q8IY92 1834 aa17.21■□□□□ 0.35
PCGF1-204ENST00000475863 DDX46Q7L014 1031 aaKnown RBP17.2■□□□□ 0.34
PCGF1-204ENST00000475863 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
PCGF1-204ENST00000475863 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
PCGF1-204ENST00000475863 LRRFIP2Q9Y608 721 aaKnown RBP17.2■□□□□ 0.34
PCGF1-204ENST00000475863 C21orf2O43822 256 aa17.19■□□□□ 0.34
PCGF1-204ENST00000475863 APLP1P51693 650 aa17.19■□□□□ 0.34
PCGF1-204ENST00000475863 GRAPQ13588 217 aa17.19■□□□□ 0.34
PCGF1-204ENST00000475863 CCDC152Q4G0S7 254 aa17.19■□□□□ 0.34
PCGF1-204ENST00000475863 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
PCGF1-204ENST00000475863 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
PCGF1-204ENST00000475863 GRAPLQ8TC17 118 aaPredicted RBP17.19■□□□□ 0.34
PCGF1-204ENST00000475863 CELF1Q92879 486 aaKnown RBP17.19■□□□□ 0.34
PCGF1-204ENST00000475863 GREM2Q9H772 168 aa17.19■□□□□ 0.34
PCGF1-204ENST00000475863 ZBTB40Q9NUA8 1239 aa17.19■□□□□ 0.34
PCGF1-204ENST00000475863 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
PCGF1-204ENST00000475863 BBOX1O75936 387 aa17.18■□□□□ 0.34
PCGF1-204ENST00000475863 AAMPQ13685 434 aa17.18■□□□□ 0.34
PCGF1-204ENST00000475863 OLFM4Q6UX06 510 aa17.18■□□□□ 0.34
PCGF1-204ENST00000475863 BICC1Q9H694 974 aaKnown RBP17.18■□□□□ 0.34
PCGF1-204ENST00000475863 COL4A1P02462 1669 aa17.17■□□□□ 0.34
PCGF1-204ENST00000475863 ARFGEF1Q9Y6D6 1849 aa17.17■□□□□ 0.34
PCGF1-204ENST00000475863 TAF1P21675 1872 aa17.17■□□□□ 0.34
PCGF1-204ENST00000475863 LMBR1LQ6UX01 489 aa17.17■□□□□ 0.34
PCGF1-204ENST00000475863 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
PCGF1-204ENST00000475863 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
PCGF1-204ENST00000475863 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
PCGF1-204ENST00000475863 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
PCGF1-204ENST00000475863 CAPN15O75808 1086 aa17.16■□□□□ 0.34
PCGF1-204ENST00000475863 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
PCGF1-204ENST00000475863 RABL6Q3YEC7 729 aaPredicted RBP17.16■□□□□ 0.34
PCGF1-204ENST00000475863 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
PCGF1-204ENST00000475863 ANKRD44Q8N8A2 993 aa17.16■□□□□ 0.34
PCGF1-204ENST00000475863 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
PCGF1-204ENST00000475863 SP8Q8IXZ3 490 aa17.15■□□□□ 0.34
PCGF1-204ENST00000475863 ATP6V0A2Q9Y487 856 aa17.15■□□□□ 0.34
PCGF1-204ENST00000475863 ITGA6P23229 1130 aa17.14■□□□□ 0.33
PCGF1-204ENST00000475863 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
PCGF1-204ENST00000475863 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
PCGF1-204ENST00000475863 NFKBIEO00221 500 aa17.13■□□□□ 0.33
PCGF1-204ENST00000475863 PRELPP51888 382 aa17.13■□□□□ 0.33
PCGF1-204ENST00000475863 ATP8B2P98198 1209 aa17.13■□□□□ 0.33
PCGF1-204ENST00000475863 CCDC57Q2TAC2 916 aa17.13■□□□□ 0.33
PCGF1-204ENST00000475863 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
PCGF1-204ENST00000475863 RPAP2Q8IXW5 612 aaPredicted RBP17.13■□□□□ 0.33
PCGF1-204ENST00000475863 IFIT5Q13325 482 aaKnown RBP17.12■□□□□ 0.33
PCGF1-204ENST00000475863 MTX1Q13505 466 aa17.12■□□□□ 0.33
PCGF1-204ENST00000475863 CCDC93Q567U6 631 aa17.12■□□□□ 0.33
PCGF1-204ENST00000475863 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
PCGF1-204ENST00000475863 CEP85Q6P2H3 762 aa17.12■□□□□ 0.33
PCGF1-204ENST00000475863 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
PCGF1-204ENST00000475863 ANKRD18AQ8IVF6 992 aa17.12■□□□□ 0.33
PCGF1-204ENST00000475863 ZNF526Q8TF50 670 aaPredicted RBP17.12■□□□□ 0.33
PCGF1-204ENST00000475863 CDC5LQ99459 802 aaKnown RBP17.12■□□□□ 0.33
PCGF1-204ENST00000475863 ANKRD18BA2A2Z9 1011 aa17.11■□□□□ 0.33
PCGF1-204ENST00000475863 SRGAP3O43295 1099 aa17.11■□□□□ 0.33
PCGF1-204ENST00000475863 RTKN2Q8IZC4 609 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms