RNA–Protein interactions for RNA: ENST00000475722.5

PRUNE1-210, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 3

Gene PRUNE1, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-210ENST00000475722 SRGAP3O43295 1099 aa18.7■□□□□ 0.58
PRUNE1-210ENST00000475722 CCDC152Q4G0S7 254 aa18.7■□□□□ 0.58
PRUNE1-210ENST00000475722 SSH3Q8TE77 659 aa18.7■□□□□ 0.58
PRUNE1-210ENST00000475722 CCDC85AQ96PX6 553 aaPredicted RBP18.7■□□□□ 0.58
PRUNE1-210ENST00000475722 SPON1Q9HCB6 807 aa18.7■□□□□ 0.58
PRUNE1-210ENST00000475722 PPP4R2Q9NY27 417 aa18.7■□□□□ 0.58
PRUNE1-210ENST00000475722 CHMP3Q9Y3E7 222 aa18.7■□□□□ 0.58
PRUNE1-210ENST00000475722 MYH3P11055 1940 aa18.7■□□□□ 0.58
PRUNE1-210ENST00000475722 TNRC6CQ9HCJ0 1690 aaKnown RBP18.69■□□□□ 0.58
PRUNE1-210ENST00000475722 POLA2Q14181 598 aa18.69■□□□□ 0.58
PRUNE1-210ENST00000475722 FAM161AQ3B820 660 aa18.69■□□□□ 0.58
PRUNE1-210ENST00000475722 GREM2Q9H772 168 aa18.69■□□□□ 0.58
PRUNE1-210ENST00000475722 C10orf71Q711Q0 1435 aa18.68■□□□□ 0.58
PRUNE1-210ENST00000475722 HMMRO75330 724 aa18.68■□□□□ 0.58
PRUNE1-210ENST00000475722 PDE6BP35913 854 aa18.68■□□□□ 0.58
PRUNE1-210ENST00000475722 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
PRUNE1-210ENST00000475722 ANKRD31Q8N7Z5 1873 aa18.68■□□□□ 0.58
PRUNE1-210ENST00000475722 RTL9Q8NET4 1388 aa18.68■□□□□ 0.58
PRUNE1-210ENST00000475722 ITGA6P23229 1130 aa18.67■□□□□ 0.58
PRUNE1-210ENST00000475722 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
PRUNE1-210ENST00000475722 IFIT5Q13325 482 aaKnown RBP18.67■□□□□ 0.58
PRUNE1-210ENST00000475722 CCDC57Q2TAC2 916 aa18.67■□□□□ 0.58
PRUNE1-210ENST00000475722 CRY2Q49AN0 593 aa18.67■□□□□ 0.58
PRUNE1-210ENST00000475722 RWDD1Q9H446 243 aaPredicted RBP18.67■□□□□ 0.58
PRUNE1-210ENST00000475722 IGHDP01880 384 aa18.66■□□□□ 0.58
PRUNE1-210ENST00000475722 CCDC136Q96JN2 1154 aa18.66■□□□□ 0.58
PRUNE1-210ENST00000475722 SEC31BQ9NQW1 1179 aa18.66■□□□□ 0.58
PRUNE1-210ENST00000475722 ANKRD18BA2A2Z9 1011 aa18.65■□□□□ 0.58
PRUNE1-210ENST00000475722 SRGNP10124 158 aa18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 HOXA10P31260 410 aaPredicted RBP18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 PTPN12Q05209 780 aaKnown RBP18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 B4GALNT3Q6L9W6 998 aa18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 DDX46Q7L014 1031 aaKnown RBP18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 KLHDC4Q8TBB5 520 aa18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 COPRSQ9NQ92 184 aa18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 PDZRN3Q9UPQ7 1066 aa18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 PA2G4Q9UQ80 394 aaKnown RBP18.64■□□□□ 0.57
PRUNE1-210ENST00000475722 H0YIN7 160 aa18.63■□□□□ 0.57
PRUNE1-210ENST00000475722 TAF7LQ5H9L4 462 aa18.63■□□□□ 0.57
PRUNE1-210ENST00000475722 C2CD5Q86YS7 1000 aa18.63■□□□□ 0.57
PRUNE1-210ENST00000475722 RBM17Q96I25 401 aaKnown RBP18.63■□□□□ 0.57
PRUNE1-210ENST00000475722 ZNF594Q96JF6 807 aaPredicted RBP18.63■□□□□ 0.57
PRUNE1-210ENST00000475722 NPR1P16066 1061 aa18.62■□□□□ 0.57
PRUNE1-210ENST00000475722 MASTLQ96GX5 879 aa18.62■□□□□ 0.57
PRUNE1-210ENST00000475722 CDC5LQ99459 802 aaKnown RBP18.62■□□□□ 0.57
PRUNE1-210ENST00000475722 DCTPP1Q9H773 170 aa18.62■□□□□ 0.57
PRUNE1-210ENST00000475722 NOP58Q9Y2X3 529 aaKnown RBP18.62■□□□□ 0.57
PRUNE1-210ENST00000475722 KIF13BQ9NQT8 1826 aa18.61■□□□□ 0.57
PRUNE1-210ENST00000475722 SURF6O75683 361 aaKnown RBP18.61■□□□□ 0.57
PRUNE1-210ENST00000475722 CHRNA5P30532 468 aa18.61■□□□□ 0.57
PRUNE1-210ENST00000475722 CELF1Q92879 486 aaKnown RBP18.61■□□□□ 0.57
PRUNE1-210ENST00000475722 CRAMP1Q96RY5 1269 aa18.61■□□□□ 0.57
PRUNE1-210ENST00000475722 CD2APQ9Y5K6 639 aa18.61■□□□□ 0.57
PRUNE1-210ENST00000475722 IGHMBP2P38935 993 aaKnown RBP18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 TGFB2P61812 414 aa18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 RPS8P62241 208 aaKnown RBP18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 GRAPQ13588 217 aa18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 ANKRD18AQ8IVF6 992 aa18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 GRAPLQ8TC17 118 aaPredicted RBP18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 SIL1Q9H173 461 aa18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 PPP1R1BQ9UD71 204 aaPredicted RBP18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 EXOC6BQ9Y2D4 811 aa18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 COL11A2P13942 1736 aaPredicted RBP18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 COL4A1P02462 1669 aa18.6■□□□□ 0.57
PRUNE1-210ENST00000475722 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
PRUNE1-210ENST00000475722 STYK1Q6J9G0 422 aa18.59■□□□□ 0.57
PRUNE1-210ENST00000475722 LDHAL6AQ6ZMR3 332 aa18.59■□□□□ 0.57
PRUNE1-210ENST00000475722 SMC5Q8IY18 1101 aa18.59■□□□□ 0.57
PRUNE1-210ENST00000475722 ZNF622Q969S3 477 aaKnown RBP eCLIP18.59■□□□□ 0.57
PRUNE1-210ENST00000475722 GCC1Q96CN9 775 aa18.59■□□□□ 0.57
PRUNE1-210ENST00000475722 MPHOSPH8Q99549 860 aa18.59■□□□□ 0.57
PRUNE1-210ENST00000475722 PUS3Q9BZE2 481 aaKnown RBP18.59■□□□□ 0.57
PRUNE1-210ENST00000475722 FBXO3Q9UK99 471 aa18.59■□□□□ 0.57
PRUNE1-210ENST00000475722 TAF1P21675 1872 aa18.58■□□□□ 0.57
PRUNE1-210ENST00000475722 A0A0G2JLW4 131 aa18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 EYA2O00167 538 aa18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 CIAO1O76071 339 aa18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 DPEP1P16444 411 aa18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 ALDH1B1P30837 517 aa18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 G3BP1Q13283 466 aaKnown RBP eCLIP18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 LRRC24Q50LG9 513 aa18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 HSP90AB4PQ58FF6 505 aa18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 ATG9AQ7Z3C6 839 aa18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 KLHL34Q8N239 644 aa18.58■□□□□ 0.56
PRUNE1-210ENST00000475722 BBOX1O75936 387 aa18.57■□□□□ 0.56
PRUNE1-210ENST00000475722 KCNA3P22001 575 aa18.57■□□□□ 0.56
PRUNE1-210ENST00000475722 CENPQQ7L2Z9 268 aaPredicted RBP18.57■□□□□ 0.56
PRUNE1-210ENST00000475722 CNNM1Q9NRU3 951 aa18.57■□□□□ 0.56
PRUNE1-210ENST00000475722 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
PRUNE1-210ENST00000475722 RIPOR2Q9Y4F9 1068 aa18.57■□□□□ 0.56
PRUNE1-210ENST00000475722 LRP5O75197 1615 aa18.56■□□□□ 0.56
PRUNE1-210ENST00000475722 RAB11FIP3O75154 756 aa18.56■□□□□ 0.56
PRUNE1-210ENST00000475722 IL15P40933 162 aaPredicted RBP18.56■□□□□ 0.56
PRUNE1-210ENST00000475722 OS9Q13438 667 aaPredicted RBP18.56■□□□□ 0.56
PRUNE1-210ENST00000475722 CNKSR1Q969H4 720 aa18.56■□□□□ 0.56
PRUNE1-210ENST00000475722 KIAA1551Q9HCM1 1747 aa18.56■□□□□ 0.56
PRUNE1-210ENST00000475722 APBB1O00213 710 aa18.55■□□□□ 0.56
PRUNE1-210ENST00000475722 ERC1Q8IUD2 1116 aa18.55■□□□□ 0.56
PRUNE1-210ENST00000475722 SASH1O94885 1247 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms