RNA–Protein interactions for RNA: ENST00000475683.1

TUBA4A-209, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-209ENST00000475683 AOC3Q16853 763 aa17.3■□□□□ 0.36
TUBA4A-209ENST00000475683 CST9Q5W186 159 aa17.3■□□□□ 0.36
TUBA4A-209ENST00000475683 CC2D2BQ6DHV5 1058 aa17.3■□□□□ 0.36
TUBA4A-209ENST00000475683 GIGYF2Q6Y7W6 1299 aaKnown RBP17.3■□□□□ 0.36
TUBA4A-209ENST00000475683 CRAMP1Q96RY5 1269 aa17.3■□□□□ 0.36
TUBA4A-209ENST00000475683 BABAM1Q9NWV8 329 aa17.3■□□□□ 0.36
TUBA4A-209ENST00000475683 LMOD1P29536 600 aaPredicted RBP17.29■□□□□ 0.36
TUBA4A-209ENST00000475683 GRM1Q13255 1194 aa17.29■□□□□ 0.36
TUBA4A-209ENST00000475683 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
TUBA4A-209ENST00000475683 CYP4F22Q6NT55 531 aa17.29■□□□□ 0.36
TUBA4A-209ENST00000475683 TSPYL6Q8N831 410 aa17.29■□□□□ 0.36
TUBA4A-209ENST00000475683 C8orf58Q8NAV2 365 aa17.29■□□□□ 0.36
TUBA4A-209ENST00000475683 RBM17Q96I25 401 aaKnown RBP17.29■□□□□ 0.36
TUBA4A-209ENST00000475683 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
TUBA4A-209ENST00000475683 DDX60Q8IY21 1712 aaKnown RBP17.29■□□□□ 0.36
TUBA4A-209ENST00000475683 ABCC4O15439 1325 aa17.28■□□□□ 0.36
TUBA4A-209ENST00000475683 POLR2AP24928 1970 aaKnown RBP17.28■□□□□ 0.36
TUBA4A-209ENST00000475683 CASP8AP2Q9UKL3 1982 aa17.28■□□□□ 0.36
TUBA4A-209ENST00000475683 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
TUBA4A-209ENST00000475683 PPIP5K2O43314 1243 aa17.28■□□□□ 0.36
TUBA4A-209ENST00000475683 PDIA6Q15084 440 aa17.28■□□□□ 0.36
TUBA4A-209ENST00000475683 PAXIP1Q6ZW49 1069 aaPredicted RBP17.28■□□□□ 0.36
TUBA4A-209ENST00000475683 DUOX1Q9NRD9 1551 aa17.28■□□□□ 0.36
TUBA4A-209ENST00000475683 COL4A1P02462 1669 aa17.27■□□□□ 0.36
TUBA4A-209ENST00000475683 NIM1KQ8IY84 436 aa17.27■□□□□ 0.36
TUBA4A-209ENST00000475683 ABHD8Q96I13 439 aa17.27■□□□□ 0.36
TUBA4A-209ENST00000475683 CAPNS2Q96L46 248 aa17.27■□□□□ 0.36
TUBA4A-209ENST00000475683 TSKSQ9UJT2 592 aa17.27■□□□□ 0.36
TUBA4A-209ENST00000475683 EIF2S2P20042 333 aaKnown RBP17.26■□□□□ 0.35
TUBA4A-209ENST00000475683 USP50Q70EL3 339 aaPredicted RBP17.26■□□□□ 0.35
TUBA4A-209ENST00000475683 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
TUBA4A-209ENST00000475683 LRRC37AA6NMS7 1700 aa17.26■□□□□ 0.35
TUBA4A-209ENST00000475683 AOC2O75106 756 aa17.25■□□□□ 0.35
TUBA4A-209ENST00000475683 MAP2K1Q02750 393 aaPredicted RBP17.25■□□□□ 0.35
TUBA4A-209ENST00000475683 CXCL9Q07325 125 aa17.25■□□□□ 0.35
TUBA4A-209ENST00000475683 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
TUBA4A-209ENST00000475683 GPRC5DQ9NZD1 345 aa17.25■□□□□ 0.35
TUBA4A-209ENST00000475683 ATP6V0A2Q9Y487 856 aa17.25■□□□□ 0.35
TUBA4A-209ENST00000475683 SHTN1A0MZ66 631 aa17.24■□□□□ 0.35
TUBA4A-209ENST00000475683 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
TUBA4A-209ENST00000475683 NLRP3Q96P20 1036 aa17.24■□□□□ 0.35
TUBA4A-209ENST00000475683 TLL2Q9Y6L7 1015 aa17.24■□□□□ 0.35
TUBA4A-209ENST00000475683 ERBB4Q15303 1308 aa17.23■□□□□ 0.35
TUBA4A-209ENST00000475683 VAMP4O75379 141 aa17.23■□□□□ 0.35
TUBA4A-209ENST00000475683 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
TUBA4A-209ENST00000475683 GMPSP49915 693 aaPredicted RBP17.23■□□□□ 0.35
TUBA4A-209ENST00000475683 PARP10Q53GL7 1025 aa17.23■□□□□ 0.35
TUBA4A-209ENST00000475683 GPR101Q96P66 508 aaPredicted RBP17.23■□□□□ 0.35
TUBA4A-209ENST00000475683 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
TUBA4A-209ENST00000475683 GLIS2Q9BZE0 524 aaPredicted RBP17.23■□□□□ 0.35
TUBA4A-209ENST00000475683 ADARB2Q9NS39 739 aaKnown RBP17.23■□□□□ 0.35
TUBA4A-209ENST00000475683 HIRAP54198 1017 aaPredicted RBP17.22■□□□□ 0.35
TUBA4A-209ENST00000475683 GRIPAP1Q4V328 841 aa17.22■□□□□ 0.35
TUBA4A-209ENST00000475683 SLC10A5Q5PT55 438 aa17.22■□□□□ 0.35
TUBA4A-209ENST00000475683 RAD17O75943 681 aa17.21■□□□□ 0.35
TUBA4A-209ENST00000475683 AIMP1Q12904 312 aaKnown RBP17.21■□□□□ 0.35
TUBA4A-209ENST00000475683 TWISTNBQ3B726 338 aaPredicted RBP17.21■□□□□ 0.35
TUBA4A-209ENST00000475683 FAM161AQ3B820 660 aa17.21■□□□□ 0.35
TUBA4A-209ENST00000475683 DLK2Q6UY11 383 aa17.21■□□□□ 0.35
TUBA4A-209ENST00000475683 TRPM4Q8TD43 1214 aa17.21■□□□□ 0.35
TUBA4A-209ENST00000475683 RTFDC1Q9BY42 306 aaPredicted RBP17.21■□□□□ 0.35
TUBA4A-209ENST00000475683 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
TUBA4A-209ENST00000475683 YDJCA8MPS7 323 aa17.2■□□□□ 0.34
TUBA4A-209ENST00000475683 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
TUBA4A-209ENST00000475683 ECE1P42892 770 aa17.2■□□□□ 0.34
TUBA4A-209ENST00000475683 COPS6Q7L5N1 327 aa17.2■□□□□ 0.34
TUBA4A-209ENST00000475683 SAPCD2Q86UD0 394 aa17.2■□□□□ 0.34
TUBA4A-209ENST00000475683 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
TUBA4A-209ENST00000475683 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
TUBA4A-209ENST00000475683 SCN9AQ15858 1988 aa17.2■□□□□ 0.34
TUBA4A-209ENST00000475683 KIAA2012Q0VF49 1180 aa17.19■□□□□ 0.34
TUBA4A-209ENST00000475683 CIAPIN1Q6FI81 312 aa17.19■□□□□ 0.34
TUBA4A-209ENST00000475683 DPP8Q6V1X1 898 aaPredicted RBP17.19■□□□□ 0.34
TUBA4A-209ENST00000475683 SP8Q8IXZ3 490 aa17.19■□□□□ 0.34
TUBA4A-209ENST00000475683 ZNF408Q9H9D4 720 aa17.19■□□□□ 0.34
TUBA4A-209ENST00000475683 MPNDQ8N594 471 aa17.18■□□□□ 0.34
TUBA4A-209ENST00000475683 ZIC5Q96T25 663 aa17.17■□□□□ 0.34
TUBA4A-209ENST00000475683 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
TUBA4A-209ENST00000475683 PGAP2Q9UHJ9 254 aa17.17■□□□□ 0.34
TUBA4A-209ENST00000475683 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
TUBA4A-209ENST00000475683 CCDC85CA6NKD9 419 aa17.16■□□□□ 0.34
TUBA4A-209ENST00000475683 BBOX1O75936 387 aa17.16■□□□□ 0.34
TUBA4A-209ENST00000475683 GRAPQ13588 217 aa17.16■□□□□ 0.34
TUBA4A-209ENST00000475683 SUPT20HQ8NEM7 779 aa17.16■□□□□ 0.34
TUBA4A-209ENST00000475683 GRAPLQ8TC17 118 aaPredicted RBP17.16■□□□□ 0.34
TUBA4A-209ENST00000475683 BEGAINQ9BUH8 593 aa17.16■□□□□ 0.34
TUBA4A-209ENST00000475683 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
TUBA4A-209ENST00000475683 TMX4Q9H1E5 349 aaPredicted RBP17.16■□□□□ 0.34
TUBA4A-209ENST00000475683 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
TUBA4A-209ENST00000475683 EGFRP00533 1210 aa17.15■□□□□ 0.34
TUBA4A-209ENST00000475683 MAP2K2P36507 400 aa17.15■□□□□ 0.34
TUBA4A-209ENST00000475683 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
TUBA4A-209ENST00000475683 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
TUBA4A-209ENST00000475683 DDX46Q7L014 1031 aaKnown RBP17.15■□□□□ 0.34
TUBA4A-209ENST00000475683 CNOT7Q9UIV1 285 aaKnown RBP17.15■□□□□ 0.34
TUBA4A-209ENST00000475683 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
TUBA4A-209ENST00000475683 BCAR3O75815 825 aa17.14■□□□□ 0.33
TUBA4A-209ENST00000475683 HOXB7P09629 217 aa17.14■□□□□ 0.33
TUBA4A-209ENST00000475683 MICALL2Q8IY33 904 aa17.14■□□□□ 0.33
TUBA4A-209ENST00000475683 SSH1Q8WYL5 1049 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms