RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 SAMM50Q9Y512 469 aa20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 ANXA1P04083 346 aa20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 FEZ1Q99689 392 aa20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 MMRN2Q9H8L6 949 aa20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.3■□□□□ 0.841e-6■□□□□ 9.6
LPCAT1-202ENST00000475622 USP48Q86UV5 1035 aa20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 KRT222Q8N1A0 295 aa20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 ZNF219Q9P2Y4 722 aaPredicted RBP20.3■□□□□ 0.84
LPCAT1-202ENST00000475622 CKAP4Q07065 602 aaKnown RBP20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 FAM200AQ8TCP9 573 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 SPAG5Q96R06 1193 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 COMMD10Q9Y6G5 202 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 CTAGE15A4D2H0 777 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 ATP2C2O75185 946 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 CTAGE8P0CG41 777 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 CTAGE6Q86UF2 777 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 CTAGE4Q8IX94 777 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 BBXQ8WY36 941 aaPredicted RBP20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 TBCAO75347 108 aaKnown RBP20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 HDAC1Q13547 482 aaPredicted RBP20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 WTAPQ15007 396 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 ALG1Q9BT22 464 aa20.29■□□□□ 0.84
LPCAT1-202ENST00000475622 ARFGAP3Q9NP61 516 aa20.28■□□□□ 0.84
LPCAT1-202ENST00000475622 ZBTB43O43298 467 aa20.28■□□□□ 0.84
LPCAT1-202ENST00000475622 CYLC1P35663 651 aaPredicted RBP20.28■□□□□ 0.84
LPCAT1-202ENST00000475622 GPATCH11Q8N954 259 aa20.28■□□□□ 0.84
LPCAT1-202ENST00000475622 STX8Q9UNK0 236 aa20.28■□□□□ 0.84
LPCAT1-202ENST00000475622 ACTN2P35609 894 aa20.28■□□□□ 0.84
LPCAT1-202ENST00000475622 MRPS27Q92552 414 aaKnown RBP20.28■□□□□ 0.84
LPCAT1-202ENST00000475622 CTAGE1Q96RT6 745 aa20.28■□□□□ 0.84
LPCAT1-202ENST00000475622 DACT1Q9NYF0 836 aa20.28■□□□□ 0.84
LPCAT1-202ENST00000475622 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.84
LPCAT1-202ENST00000475622 MEIS3Q99687 375 aa20.27■□□□□ 0.84
LPCAT1-202ENST00000475622 IL16Q14005 1332 aa20.27■□□□□ 0.84
LPCAT1-202ENST00000475622 AMOTL2Q9Y2J4 779 aa20.27■□□□□ 0.84
LPCAT1-202ENST00000475622 IKBKGQ9Y6K9 419 aa20.27■□□□□ 0.84
LPCAT1-202ENST00000475622 CCDC174Q6PII3 467 aa20.27■□□□□ 0.84
LPCAT1-202ENST00000475622 IFNL2Q8IZJ0 200 aa20.27■□□□□ 0.83
LPCAT1-202ENST00000475622 RBM8AQ9Y5S9 174 aaKnown RBP20.27■□□□□ 0.83
LPCAT1-202ENST00000475622 CCDC155Q8N6L0 562 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 STAT6P42226 847 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 PDE1AP54750 535 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 MCM6Q14566 821 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 AOPEPQ8N6M6 819 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 DNAJC25Q9H1X3 360 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 CABP5Q9NP86 173 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 UQCRFS1P1P0C7P4 283 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 C6orf163Q5TEZ5 329 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 PPM1EQ8WY54 764 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 CCDC172P0C7W6 258 aa20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 XRCC6P12956 609 aaKnown RBP eCLIP20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
LPCAT1-202ENST00000475622 ADAMTS2O95450 1211 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 PPP1R14CQ8TAE6 165 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 FBF1Q8TES7 1133 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 ESYT1Q9BSJ8 1104 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 BMP15O95972 392 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 MNAT1P51948 309 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 SPAG1Q07617 926 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 CRNKL1Q9BZJ0 848 aaKnown RBP20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 A0A1W2PRG0 241 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 EXOC5O00471 708 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 HLA-DOAP06340 250 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 MARCKSP29966 332 aaPredicted RBP20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 ANKRD13DQ6ZTN6 518 aa20.25■□□□□ 0.83
LPCAT1-202ENST00000475622 PTGS1P23219 599 aa20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 KRT23Q9C075 422 aa20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 NSD2O96028 1365 aa20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 TTLL12Q14166 644 aaPredicted RBP20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 TBC1D5Q92609 795 aa20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 ARHGAP45Q92619 1136 aa20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 MYCNP04198 464 aaPredicted RBP20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 EPRSP07814 1512 aaKnown RBP20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 DNM1Q05193 864 aaKnown RBP20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 PLVAPQ9BX97 442 aa20.24■□□□□ 0.83
LPCAT1-202ENST00000475622 CLCN1P35523 988 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 BICD1Q96G01 975 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 TIGD1Q96MW7 591 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 ARHGEF11O15085 1522 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 SNRPA1P09661 255 aaKnown RBP20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 RTN1Q16799 776 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 NCOA1Q15788 1441 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 ERMNQ8TAM6 284 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 WDHD1O75717 1129 aaPredicted RBP20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 F13A1P00488 732 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 ZFYP08048 801 aaPredicted RBP20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 SYT1P21579 422 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 FERMT1Q9BQL6 677 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 SERPINA10Q9UK55 444 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 HSPA4P34932 840 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 Q6ZUG5 572 aa20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 TTC12Q9H892 705 aaPredicted RBP20.23■□□□□ 0.83
LPCAT1-202ENST00000475622 TSNARE1Q96NA8 513 aa20.22■□□□□ 0.83
LPCAT1-202ENST00000475622 RSPH14Q9UHP6 348 aa20.22■□□□□ 0.83
LPCAT1-202ENST00000475622 IFIT1BQ5T764 474 aaKnown RBP20.22■□□□□ 0.83
LPCAT1-202ENST00000475622 PSMD1Q99460 953 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 408 ms