RNA–Protein interactions for RNA: ENST00000475614.6

CCDC30-208, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,001 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-208ENST00000475614 SRPK2P78362 688 aaKnown RBP9.07□□□□□ -0.96
CCDC30-208ENST00000475614 CDCA8Q53HL2 280 aa9.07□□□□□ -0.96
CCDC30-208ENST00000475614 SHPRHQ149N8 1683 aa9.07□□□□□ -0.96
CCDC30-208ENST00000475614 CPSF1Q10570 1443 aaKnown RBP9.06□□□□□ -0.96
CCDC30-208ENST00000475614 MARF1Q9Y4F3 1742 aaKnown RBP9.06□□□□□ -0.96
CCDC30-208ENST00000475614 CRYBG1Q9Y4K1 1723 aa9.06□□□□□ -0.96
CCDC30-208ENST00000475614 ESCO1Q5FWF5 840 aa9.06□□□□□ -0.96
CCDC30-208ENST00000475614 WWC1Q8IX03 1113 aa9.06□□□□□ -0.96
CCDC30-208ENST00000475614 CYLDQ9NQC7 956 aa9.06□□□□□ -0.96
CCDC30-208ENST00000475614 CEP126Q9P2H0 1117 aa9.06□□□□□ -0.96
CCDC30-208ENST00000475614 COG6Q9Y2V7 657 aa9.06□□□□□ -0.96
CCDC30-208ENST00000475614 SSH2Q76I76 1423 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 COL22A1Q8NFW1 1626 aaPredicted RBP9.05□□□□□ -0.96
CCDC30-208ENST00000475614 TTLL8A6PVC2 850 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 RAD21O60216 631 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 ADD1P35611 737 aaKnown RBP9.05□□□□□ -0.96
CCDC30-208ENST00000475614 SOX11P35716 441 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 ERVK-9P63128 1117 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 RELBQ01201 579 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 KRT76Q01546 638 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
CCDC30-208ENST00000475614 AGBL1Q96MI9 1066 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 ABCA3Q99758 1704 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
CCDC30-208ENST00000475614 BRD4O60885 1362 aaPredicted RBP9.04□□□□□ -0.96
CCDC30-208ENST00000475614 KIF20BQ96Q89 1820 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 PTGIRP43119 386 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 PIP4K2BP78356 416 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 VAC14Q08AM6 782 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 KCNMA1Q12791 1236 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 CABP1Q9NZU7 370 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 PCDHB11Q9Y5F2 797 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 USP6P35125 1406 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 ACEP12821 1306 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 KIF7Q2M1P5 1343 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 PIK3C2AO00443 1686 aa9.04□□□□□ -0.96
CCDC30-208ENST00000475614 ANKRD26Q9UPS8 1709 aa9.03□□□□□ -0.96
CCDC30-208ENST00000475614 SBNO1A3KN83 1393 aa9.03□□□□□ -0.96
CCDC30-208ENST00000475614 CCDC7Q96M83 1385 aa9.03□□□□□ -0.96
CCDC30-208ENST00000475614 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.03□□□□□ -0.96
CCDC30-208ENST00000475614 PMFBP1Q8TBY8 1022 aa9.03□□□□□ -0.96
CCDC30-208ENST00000475614 MED1Q15648 1581 aaPredicted RBP9.03□□□□□ -0.96
CCDC30-208ENST00000475614 A0A1W2PP64 1363 aa9.02□□□□□ -0.97
CCDC30-208ENST00000475614 ANKRD36BQ8N2N9 1353 aa9.02□□□□□ -0.97
CCDC30-208ENST00000475614 FOXO3O43524 673 aa9.02□□□□□ -0.97
CCDC30-208ENST00000475614 SUZ12Q15022 739 aaKnown RBP9.02□□□□□ -0.97
CCDC30-208ENST00000475614 KCTD17Q8N5Z5 321 aa9.02□□□□□ -0.97
CCDC30-208ENST00000475614 SLC12A5Q9H2X9 1139 aa9.02□□□□□ -0.97
CCDC30-208ENST00000475614 WASHC2AQ641Q2 1341 aa9.02□□□□□ -0.97
CCDC30-208ENST00000475614 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
CCDC30-208ENST00000475614 HSPA1LP34931 641 aa9.01□□□□□ -0.97
CCDC30-208ENST00000475614 SLFNL1Q499Z3 407 aa9.01□□□□□ -0.97
CCDC30-208ENST00000475614 TNS3Q68CZ2 1445 aa9.01□□□□□ -0.97
CCDC30-208ENST00000475614 EDC4Q6P2E9 1401 aaKnown RBP9.01□□□□□ -0.97
CCDC30-208ENST00000475614 CYP2U1Q7Z449 544 aa9.01□□□□□ -0.97
CCDC30-208ENST00000475614 KDF1Q8NAX2 398 aaPredicted RBP9.01□□□□□ -0.97
CCDC30-208ENST00000475614 NGDNQ8NEJ9 315 aaKnown RBP9.01□□□□□ -0.97
CCDC30-208ENST00000475614 DDX17Q92841 729 aaKnown RBP9.01□□□□□ -0.97
CCDC30-208ENST00000475614 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
CCDC30-208ENST00000475614 ZNF395Q9H8N7 513 aaPredicted RBP9.01□□□□□ -0.97
CCDC30-208ENST00000475614 PHRF1Q9P1Y6 1649 aaKnown RBP9.01□□□□□ -0.97
CCDC30-208ENST00000475614 SPATA31A3Q5VYP0 1347 aa9.01□□□□□ -0.97
CCDC30-208ENST00000475614 SEMA3FQ13275 785 aa9□□□□□ -0.97
CCDC30-208ENST00000475614 KRT28Q7Z3Y7 464 aa9□□□□□ -0.97
CCDC30-208ENST00000475614 POLMQ9NP87 494 aaPredicted RBP9□□□□□ -0.97
CCDC30-208ENST00000475614 TERF2IPQ9NYB0 399 aa9□□□□□ -0.97
CCDC30-208ENST00000475614 KTN1Q86UP2 1357 aaKnown RBP8.99□□□□□ -0.97
CCDC30-208ENST00000475614 PNPLA6Q8IY17 1366 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 CTSOP43234 321 aaPredicted RBP8.99□□□□□ -0.97
CCDC30-208ENST00000475614 PSME1Q06323 249 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 RNF135Q8IUD6 432 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 PHTF2Q8N3S3 785 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 TMC1Q8TDI8 760 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 LRRC59Q96AG4 307 aaKnown RBP8.99□□□□□ -0.97
CCDC30-208ENST00000475614 POM121Q96HA1 1249 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 CNTNAP3BQ96NU0 1288 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 CCDC85AQ96PX6 553 aaPredicted RBP8.99□□□□□ -0.97
CCDC30-208ENST00000475614 CNTNAP3Q9BZ76 1288 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 TTC21AQ8NDW8 1320 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 JCADQ9P266 1359 aa8.99□□□□□ -0.97
CCDC30-208ENST00000475614 FIGNL2A6NMB9 653 aa8.98□□□□□ -0.97
CCDC30-208ENST00000475614 TRAK2O60296 914 aa8.98□□□□□ -0.97
CCDC30-208ENST00000475614 MYCP01106 439 aaPredicted RBP8.98□□□□□ -0.97
CCDC30-208ENST00000475614 SCTRP47872 440 aa8.98□□□□□ -0.97
CCDC30-208ENST00000475614 XPCQ01831 940 aaPredicted RBP8.98□□□□□ -0.97
CCDC30-208ENST00000475614 PTSQ03393 145 aa8.98□□□□□ -0.97
CCDC30-208ENST00000475614 HDGFL2Q7Z4V5 671 aaPredicted RBP8.98□□□□□ -0.97
CCDC30-208ENST00000475614 RNF217Q8TC41 542 aa8.98□□□□□ -0.97
CCDC30-208ENST00000475614 SLIT3O75094 1523 aa8.98□□□□□ -0.97
CCDC30-208ENST00000475614 TTC21BQ7Z4L5 1316 aa8.98□□□□□ -0.97
CCDC30-208ENST00000475614 ARHGEF10O15013 1369 aa8.98□□□□□ -0.97
CCDC30-208ENST00000475614 USP31Q70CQ4 1352 aa8.98□□□□□ -0.97
CCDC30-208ENST00000475614 MAP2P11137 1827 aaKnown RBP8.97□□□□□ -0.97
CCDC30-208ENST00000475614 OSBPL3Q9H4L5 887 aa8.97□□□□□ -0.97
CCDC30-208ENST00000475614 DOLKQ9UPQ8 538 aa8.97□□□□□ -0.97
CCDC30-208ENST00000475614 OVOS2A0A0J9YW53 1432 aa8.97□□□□□ -0.97
CCDC30-208ENST00000475614 OVOS2Q6IE36 1432 aa8.97□□□□□ -0.97
CCDC30-208ENST00000475614 LTN1O94822 1766 aa8.96□□□□□ -0.97
CCDC30-208ENST00000475614 GPC1P35052 558 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms