RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 EAF1Q96JC9 268 aaPredicted RBP7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 NIFKQ9BYG3 293 aaKnown RBP7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 SLC52A1Q9NWF4 448 aa7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 MRVI1Q9Y6F6 885 aa7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 MINDY4BA8MYZ0 360 aa7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 U2SURPO15042 1029 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 CHMP4BP1P59074 171 aa7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 PWP1Q13610 501 aa7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 RC3H1Q5TC82 1133 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 KDF1Q8NAX2 398 aaPredicted RBP7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 SNX29Q8TEQ0 813 aa7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 TRIM55Q9BYV6 548 aa7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 IRX2Q9BZI1 471 aaPredicted RBP7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 NPHS2Q9NP85 383 aa7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 GINM1Q9NU53 330 aa7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 STRIP2Q9ULQ0 834 aa7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 FNDC3AQ9Y2H6 1198 aaKnown RBP7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 PRKAB1Q9Y478 270 aa7.02□□□□□ -1.29
SRGAP3-205ENST00000475560 FAM221BA6H8Z2 402 aa7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 ADH1CP00326 375 aa7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 EIF4A3P38919 411 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 TXLNAP40222 546 aa7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 PDE12Q6L8Q7 609 aaKnown RBP7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 ZNF438Q7Z4V0 828 aa7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 C7orf43Q8WVR3 580 aa7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 DEPDC7Q96QD5 511 aa7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 TMX1Q9H3N1 280 aa7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 SNTG2Q9NY99 539 aa7.01□□□□□ -1.29
SRGAP3-205ENST00000475560 PLEKHD1A6NEE1 506 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 TGFBR3LH3BV60 316 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 SIAH2O43255 324 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 PHACTR2O75167 634 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 GADD45BO75293 160 aaPredicted RBP7□□□□□ -1.29
SRGAP3-205ENST00000475560 POLR3DP05423 398 aaPredicted RBP7□□□□□ -1.29
SRGAP3-205ENST00000475560 ADH1AP07327 375 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 SOX9P48436 509 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 HIF1AQ16665 826 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 GALNT12Q8IXK2 581 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 RPUSD2Q8IZ73 545 aaKnown RBP7□□□□□ -1.29
SRGAP3-205ENST00000475560 ZNF296Q8WUU4 475 aaPredicted RBP7□□□□□ -1.29
SRGAP3-205ENST00000475560 ZSCAN10Q96SZ4 725 aaPredicted RBP7□□□□□ -1.29
SRGAP3-205ENST00000475560 PPP4R2Q9NY27 417 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 CHPF2Q9P2E5 772 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 TLL2Q9Y6L7 1015 aa7□□□□□ -1.29
SRGAP3-205ENST00000475560 LOC102724159A0A0B4J2E5 919 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 NR3C2P08235 984 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 GSTT1P30711 240 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 GBP2P32456 591 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 KCNC4Q03721 635 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 CBLBQ13191 982 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 COL9A2Q14055 689 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 GRM2Q14416 872 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 RASA3Q14644 834 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 PWP2Q15269 919 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 PLEKHG6Q3KR16 790 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 HNRNPLLQ8WVV9 542 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 TMEM74Q96NL1 305 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 NLRP3Q96P20 1036 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 NT5C1AQ9BXI3 368 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 SLKQ9H2G2 1235 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 SUV39H2Q9H5I1 410 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 ELP3Q9H9T3 547 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 TTF2Q9UNY4 1162 aaKnown RBP6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 RIPOR2Q9Y4F9 1068 aa6.99□□□□□ -1.29
SRGAP3-205ENST00000475560 PTGIRP43119 386 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 IDH3AP50213 366 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 AMPD3Q01432 767 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 MAP3K10Q02779 954 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 PLA2G2CQ5R387 149 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 TMEM214Q6NUQ4 689 aaKnown RBP6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 RHPN1Q8TCX5 695 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 CPLX3Q8WVH0 158 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 SUSD3Q96L08 255 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 IRF2BPLQ9H1B7 796 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 FANCLQ9NW38 375 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 DDX56Q9NY93 547 aaKnown RBP6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 TMEM63CQ9P1W3 806 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 PRKAG3Q9UGI9 489 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 USP20Q9Y2K6 914 aa6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 R3HCC1Q9Y3T6 440 aaKnown RBP6.98□□□□□ -1.29
SRGAP3-205ENST00000475560 UBAP1LF5GYI3 381 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 F6X3S4 739 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 MEN1O00255 615 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 CDC45O75419 566 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 RPIAP49247 311 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 CCDC85BQ15834 202 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 IER5Q5VY09 327 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 CMTR1Q8N1G2 835 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 LILRB2Q8N423 598 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 ZNF280CQ8ND82 737 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 RHBDD1Q8TEB9 315 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 SH3TC2Q8TF17 1288 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 STAG1Q8WVM7 1258 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 APPBP2Q92624 585 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 TRIM56Q9BRZ2 755 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 CCDC113Q9H0I3 377 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 KANSL2Q9H9L4 492 aa6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 RTCBQ9Y3I0 505 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-205ENST00000475560 RNF223E7ERA6 249 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms