RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 ANKRD36CQ5JPF3 1778 aa16.15■□□□□ 0.18
TTC38-206ENST00000475467 CDC37L1Q7L3B6 337 aa16.14■□□□□ 0.17
TTC38-206ENST00000475467 DPF2Q92785 391 aa16.14■□□□□ 0.17
TTC38-206ENST00000475467 BCL2L13Q9BXK5 485 aa16.14■□□□□ 0.17
TTC38-206ENST00000475467 CHMP4AQ9BY43 222 aa16.14■□□□□ 0.17
TTC38-206ENST00000475467 COL4A5P29400 1685 aa16.14■□□□□ 0.17
TTC38-206ENST00000475467 H7C1D1 291 aa16.13■□□□□ 0.17
TTC38-206ENST00000475467 CHL1O00533 1208 aa16.13■□□□□ 0.17
TTC38-206ENST00000475467 TCERG1O14776 1098 aaKnown RBP16.13■□□□□ 0.17
TTC38-206ENST00000475467 CST9Q5W186 159 aa16.13■□□□□ 0.17
TTC38-206ENST00000475467 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
TTC38-206ENST00000475467 PAXIP1Q6ZW49 1069 aaPredicted RBP16.13■□□□□ 0.17
TTC38-206ENST00000475467 LTBP1Q14766 1721 aa16.13■□□□□ 0.17
TTC38-206ENST00000475467 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
TTC38-206ENST00000475467 SAPCD2Q86UD0 394 aa16.12■□□□□ 0.17
TTC38-206ENST00000475467 PLBD2Q8NHP8 589 aa16.12■□□□□ 0.17
TTC38-206ENST00000475467 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
TTC38-206ENST00000475467 DBF4Q9UBU7 674 aaPredicted RBP16.12■□□□□ 0.17
TTC38-206ENST00000475467 RPS12P25398 132 aaKnown RBP16.11■□□□□ 0.17
TTC38-206ENST00000475467 GMPSP49915 693 aaPredicted RBP16.11■□□□□ 0.17
TTC38-206ENST00000475467 SF3B3Q15393 1217 aaKnown RBP16.11■□□□□ 0.17
TTC38-206ENST00000475467 ANKRD13DQ6ZTN6 518 aa16.11■□□□□ 0.17
TTC38-206ENST00000475467 AIMP1Q12904 312 aaKnown RBP16.1■□□□□ 0.17
TTC38-206ENST00000475467 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
TTC38-206ENST00000475467 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
TTC38-206ENST00000475467 ABHD8Q96I13 439 aa16.1■□□□□ 0.17
TTC38-206ENST00000475467 EYA3Q99504 573 aa16.1■□□□□ 0.17
TTC38-206ENST00000475467 HYPKQ9NX55 129 aa16.1■□□□□ 0.17
TTC38-206ENST00000475467 CELF2O95319 508 aaKnown RBP16.09■□□□□ 0.17
TTC38-206ENST00000475467 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
TTC38-206ENST00000475467 BRPF1P55201 1214 aaPredicted RBP16.09■□□□□ 0.17
TTC38-206ENST00000475467 WASHC4Q2M389 1173 aa16.09■□□□□ 0.17
TTC38-206ENST00000475467 CYP4F22Q6NT55 531 aa16.09■□□□□ 0.17
TTC38-206ENST00000475467 RUNDC1Q96C34 613 aa16.09■□□□□ 0.17
TTC38-206ENST00000475467 CNOT7Q9UIV1 285 aaKnown RBP16.09■□□□□ 0.17
TTC38-206ENST00000475467 NOGQ13253 232 aa16.08■□□□□ 0.16
TTC38-206ENST00000475467 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.16
TTC38-206ENST00000475467 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.16
TTC38-206ENST00000475467 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.16
TTC38-206ENST00000475467 TRAF5O00463 557 aa16.07■□□□□ 0.16
TTC38-206ENST00000475467 ANXA1P04083 346 aa16.07■□□□□ 0.16
TTC38-206ENST00000475467 CALD1Q05682 793 aaKnown RBP16.07■□□□□ 0.16
TTC38-206ENST00000475467 WDR43Q15061 677 aaKnown RBP eCLIP16.07■□□□□ 0.16
TTC38-206ENST00000475467 CFAP44Q96MT7 982 aa16.07■□□□□ 0.16
TTC38-206ENST00000475467 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
TTC38-206ENST00000475467 RAD17O75943 681 aa16.06■□□□□ 0.16
TTC38-206ENST00000475467 NECTIN2Q92692 538 aa16.06■□□□□ 0.16
TTC38-206ENST00000475467 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
TTC38-206ENST00000475467 LAMB2P55268 1798 aa16.05■□□□□ 0.16
TTC38-206ENST00000475467 GLIS2Q9BZE0 524 aaPredicted RBP16.05■□□□□ 0.16
TTC38-206ENST00000475467 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
TTC38-206ENST00000475467 RGS19P49795 217 aa16.04■□□□□ 0.16
TTC38-206ENST00000475467 HIRAP54198 1017 aaPredicted RBP16.04■□□□□ 0.16
TTC38-206ENST00000475467 RPS8P62241 208 aaKnown RBP16.04■□□□□ 0.16
TTC38-206ENST00000475467 GRM1Q13255 1194 aa16.04■□□□□ 0.16
TTC38-206ENST00000475467 MICALL2Q8IY33 904 aa16.04■□□□□ 0.16
TTC38-206ENST00000475467 REM2Q8IYK8 340 aaPredicted RBP16.04■□□□□ 0.16
TTC38-206ENST00000475467 CCDC102AQ96A19 550 aa16.04■□□□□ 0.16
TTC38-206ENST00000475467 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
TTC38-206ENST00000475467 YDJCA8MPS7 323 aa16.03■□□□□ 0.16
TTC38-206ENST00000475467 C6orf229H3BNL8 230 aa16.03■□□□□ 0.16
TTC38-206ENST00000475467 FMR1Q06787 632 aaKnown RBP eCLIP16.03■□□□□ 0.16
TTC38-206ENST00000475467 NEUROD2Q15784 382 aa16.03■□□□□ 0.16
TTC38-206ENST00000475467 C2orf69Q8N8R5 385 aa16.03■□□□□ 0.16
TTC38-206ENST00000475467 ZBTB38Q8NAP3 1195 aaPredicted RBP16.03■□□□□ 0.16
TTC38-206ENST00000475467 DCPSQ96C86 337 aaKnown RBP16.03■□□□□ 0.16
TTC38-206ENST00000475467 ZC3H12CQ9C0D7 883 aaKnown RBP16.03■□□□□ 0.16
TTC38-206ENST00000475467 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
TTC38-206ENST00000475467 PSMD14O00487 310 aa16.02■□□□□ 0.16
TTC38-206ENST00000475467 IRS4O14654 1257 aaPredicted RBP16.02■□□□□ 0.16
TTC38-206ENST00000475467 GOLGA2Q08379 1002 aa16.02■□□□□ 0.16
TTC38-206ENST00000475467 DUSP27Q5VZP5 1158 aa16.02■□□□□ 0.16
TTC38-206ENST00000475467 FAM89AQ96GI7 184 aa16.02■□□□□ 0.16
TTC38-206ENST00000475467 SAGE1Q9NXZ1 904 aa16.02■□□□□ 0.16
TTC38-206ENST00000475467 LAS1LQ9Y4W2 734 aaKnown RBP16.02■□□□□ 0.16
TTC38-206ENST00000475467 AOC2O75106 756 aa16.01■□□□□ 0.15
TTC38-206ENST00000475467 HUNKP57058 714 aa16.01■□□□□ 0.15
TTC38-206ENST00000475467 KRT26Q7Z3Y9 468 aa16.01■□□□□ 0.15
TTC38-206ENST00000475467 RIC3Q7Z5B4 369 aa16.01■□□□□ 0.15
TTC38-206ENST00000475467 CCDC191Q8NCU4 936 aa16.01■□□□□ 0.15
TTC38-206ENST00000475467 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
TTC38-206ENST00000475467 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
TTC38-206ENST00000475467 ZNF609O15014 1411 aa16.01■□□□□ 0.15
TTC38-206ENST00000475467 DDX60Q8IY21 1712 aaKnown RBP16■□□□□ 0.15
TTC38-206ENST00000475467 G3V3G9 751 aa16■□□□□ 0.15
TTC38-206ENST00000475467 ECE2O60344 883 aa16■□□□□ 0.15
TTC38-206ENST00000475467 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
TTC38-206ENST00000475467 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
TTC38-206ENST00000475467 MMP14P50281 582 aa16■□□□□ 0.15
TTC38-206ENST00000475467 GNAI1P63096 354 aa16■□□□□ 0.15
TTC38-206ENST00000475467 MLLT1Q03111 559 aaPredicted RBP16■□□□□ 0.15
TTC38-206ENST00000475467 CCDC152Q4G0S7 254 aa16■□□□□ 0.15
TTC38-206ENST00000475467 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
TTC38-206ENST00000475467 RGMBQ6NW40 437 aa16■□□□□ 0.15
TTC38-206ENST00000475467 USP48Q86UV5 1035 aa16■□□□□ 0.15
TTC38-206ENST00000475467 AGBL3Q8NEM8 1001 aa16■□□□□ 0.15
TTC38-206ENST00000475467 ZNF408Q9H9D4 720 aa16■□□□□ 0.15
TTC38-206ENST00000475467 GBA2Q9HCG7 927 aaPredicted RBP16■□□□□ 0.15
TTC38-206ENST00000475467 IFT57Q9NWB7 429 aa16■□□□□ 0.15
TTC38-206ENST00000475467 POLLQ9UGP5 575 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms