RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 GRAPLQ8TC17 118 aaPredicted RBP23.34■■□□□ 1.33
PCGF3-209ENST00000475288 CAPNS2Q96L46 248 aa23.34■■□□□ 1.33
PCGF3-209ENST00000475288 TLL2Q9Y6L7 1015 aa23.34■■□□□ 1.33
PCGF3-209ENST00000475288 ZC3H15Q8WU90 426 aaKnown RBP23.33■■□□□ 1.33
PCGF3-209ENST00000475288 TRMT112Q9UI30 125 aaKnown RBP23.33■■□□□ 1.33
PCGF3-209ENST00000475288 DUOX1Q9NRD9 1551 aa23.32■■□□□ 1.32
PCGF3-209ENST00000475288 HOXB7P09629 217 aa23.32■■□□□ 1.32
PCGF3-209ENST00000475288 HCLS1P14317 486 aaPredicted RBP23.32■■□□□ 1.32
PCGF3-209ENST00000475288 TNIP1Q15025 636 aa23.32■■□□□ 1.32
PCGF3-209ENST00000475288 CIAPIN1Q6FI81 312 aa23.32■■□□□ 1.32
PCGF3-209ENST00000475288 TRAF5O00463 557 aa23.31■■□□□ 1.32
PCGF3-209ENST00000475288 GMPSP49915 693 aaPredicted RBP23.31■■□□□ 1.32
PCGF3-209ENST00000475288 FMR1Q06787 632 aaKnown RBP eCLIP23.31■■□□□ 1.32
PCGF3-209ENST00000475288 AIMP1Q12904 312 aaKnown RBP23.31■■□□□ 1.32
PCGF3-209ENST00000475288 HHIPL1Q96JK4 782 aa23.31■■□□□ 1.32
PCGF3-209ENST00000475288 DDX60Q8IY21 1712 aaKnown RBP23.3■■□□□ 1.32
PCGF3-209ENST00000475288 MAP2K2P36507 400 aa23.3■■□□□ 1.32
PCGF3-209ENST00000475288 GPR101Q96P66 508 aaPredicted RBP23.3■■□□□ 1.32
PCGF3-209ENST00000475288 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
PCGF3-209ENST00000475288 CYP4F22Q6NT55 531 aa23.28■■□□□ 1.32
PCGF3-209ENST00000475288 SAPCD2Q86UD0 394 aa23.28■■□□□ 1.32
PCGF3-209ENST00000475288 NECTIN2Q92692 538 aa23.28■■□□□ 1.32
PCGF3-209ENST00000475288 BEGAINQ9BUH8 593 aa23.28■■□□□ 1.32
PCGF3-209ENST00000475288 TRIM35Q9UPQ4 493 aa23.28■■□□□ 1.32
PCGF3-209ENST00000475288 MYBBP1AQ9BQG0 1328 aaKnown RBP23.28■■□□□ 1.32
PCGF3-209ENST00000475288 RUNDC1Q96C34 613 aa23.27■■□□□ 1.32
PCGF3-209ENST00000475288 ISCA1Q9BUE6 129 aa23.27■■□□□ 1.32
PCGF3-209ENST00000475288 CHPF2Q9P2E5 772 aa23.27■■□□□ 1.32
PCGF3-209ENST00000475288 RAD17O75943 681 aa23.26■■□□□ 1.31
PCGF3-209ENST00000475288 SF3B3Q15393 1217 aaKnown RBP23.26■■□□□ 1.31
PCGF3-209ENST00000475288 ANKRD13DQ6ZTN6 518 aa23.26■■□□□ 1.31
PCGF3-209ENST00000475288 PAXIP1Q6ZW49 1069 aaPredicted RBP23.26■■□□□ 1.31
PCGF3-209ENST00000475288 BCL2L13Q9BXK5 485 aa23.26■■□□□ 1.31
PCGF3-209ENST00000475288 DBF4Q9UBU7 674 aaPredicted RBP23.26■■□□□ 1.31
PCGF3-209ENST00000475288 TAF1P21675 1872 aa23.26■■□□□ 1.31
PCGF3-209ENST00000475288 YDJCA8MPS7 323 aa23.25■■□□□ 1.31
PCGF3-209ENST00000475288 CELF2O95319 508 aaKnown RBP23.25■■□□□ 1.31
PCGF3-209ENST00000475288 KRT24Q2M2I5 525 aa23.25■■□□□ 1.31
PCGF3-209ENST00000475288 HDGFL1Q5TGJ6 251 aa23.25■■□□□ 1.31
PCGF3-209ENST00000475288 DPF2Q92785 391 aa23.25■■□□□ 1.31
PCGF3-209ENST00000475288 CA12O43570 354 aa23.24■■□□□ 1.31
PCGF3-209ENST00000475288 HIRAP54198 1017 aaPredicted RBP23.24■■□□□ 1.31
PCGF3-209ENST00000475288 TRIM28Q13263 835 aaKnown RBP23.24■■□□□ 1.31
PCGF3-209ENST00000475288 CDC37L1Q7L3B6 337 aa23.24■■□□□ 1.31
PCGF3-209ENST00000475288 ABHD8Q96I13 439 aa23.24■■□□□ 1.31
PCGF3-209ENST00000475288 GLIS2Q9BZE0 524 aaPredicted RBP23.24■■□□□ 1.31
PCGF3-209ENST00000475288 CNOT7Q9UIV1 285 aaKnown RBP23.24■■□□□ 1.31
PCGF3-209ENST00000475288 NEUROD2Q15784 382 aa23.23■■□□□ 1.31
PCGF3-209ENST00000475288 HYPKQ9NX55 129 aa23.23■■□□□ 1.31
PCGF3-209ENST00000475288 H7C1D1 291 aa23.22■■□□□ 1.31
PCGF3-209ENST00000475288 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
PCGF3-209ENST00000475288 TRPM4Q8TD43 1214 aa23.22■■□□□ 1.31
PCGF3-209ENST00000475288 CFAP44Q96MT7 982 aa23.22■■□□□ 1.31
PCGF3-209ENST00000475288 BRPF1P55201 1214 aaPredicted RBP23.21■■□□□ 1.31
PCGF3-209ENST00000475288 WASHC4Q2M389 1173 aa23.21■■□□□ 1.31
PCGF3-209ENST00000475288 RPS12P25398 132 aaKnown RBP23.2■■□□□ 1.3
PCGF3-209ENST00000475288 WDR43Q15061 677 aaKnown RBP eCLIP23.2■■□□□ 1.3
PCGF3-209ENST00000475288 CELF1Q92879 486 aaKnown RBP23.2■■□□□ 1.3
PCGF3-209ENST00000475288 FAM89AQ96GI7 184 aa23.2■■□□□ 1.3
PCGF3-209ENST00000475288 LAS1LQ9Y4W2 734 aaKnown RBP23.2■■□□□ 1.3
PCGF3-209ENST00000475288 AOC2O75106 756 aa23.19■■□□□ 1.3
PCGF3-209ENST00000475288 GRM1Q13255 1194 aa23.19■■□□□ 1.3
PCGF3-209ENST00000475288 MICALL2Q8IY33 904 aa23.19■■□□□ 1.3
PCGF3-209ENST00000475288 NSFL1CQ9UNZ2 370 aaKnown RBP23.19■■□□□ 1.3
PCGF3-209ENST00000475288 EYA3Q99504 573 aa23.18■■□□□ 1.3
PCGF3-209ENST00000475288 COL4A1P02462 1669 aa23.17■■□□□ 1.3
PCGF3-209ENST00000475288 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
PCGF3-209ENST00000475288 PSMD14O00487 310 aa23.17■■□□□ 1.3
PCGF3-209ENST00000475288 HSP90B1P14625 803 aaKnown RBP23.17■■□□□ 1.3
PCGF3-209ENST00000475288 DUSP27Q5VZP5 1158 aa23.17■■□□□ 1.3
PCGF3-209ENST00000475288 POLLQ9UGP5 575 aa23.17■■□□□ 1.3
PCGF3-209ENST00000475288 ADAMTS8Q9UP79 889 aa23.17■■□□□ 1.3
PCGF3-209ENST00000475288 SHTN1A0MZ66 631 aa23.16■■□□□ 1.3
PCGF3-209ENST00000475288 IRS4O14654 1257 aaPredicted RBP23.16■■□□□ 1.3
PCGF3-209ENST00000475288 PODXL2Q9NZ53 605 aa23.16■■□□□ 1.3
PCGF3-209ENST00000475288 ZBTB12Q9Y330 459 aaPredicted RBP23.16■■□□□ 1.3
PCGF3-209ENST00000475288 ZNF609O15014 1411 aa23.16■■□□□ 1.3
PCGF3-209ENST00000475288 ZNF853P0CG23 659 aa23.15■■□□□ 1.3
PCGF3-209ENST00000475288 RPS8P62241 208 aaKnown RBP23.15■■□□□ 1.3
PCGF3-209ENST00000475288 GPSM2P81274 684 aa23.15■■□□□ 1.3
PCGF3-209ENST00000475288 NOGQ13253 232 aa23.15■■□□□ 1.3
PCGF3-209ENST00000475288 ZBTB38Q8NAP3 1195 aaPredicted RBP23.15■■□□□ 1.3
PCGF3-209ENST00000475288 DBNDD1Q9H9R9 158 aa23.15■■□□□ 1.3
PCGF3-209ENST00000475288 C6orf229H3BNL8 230 aa23.14■■□□□ 1.29
PCGF3-209ENST00000475288 ECE2O60344 883 aa23.14■■□□□ 1.29
PCGF3-209ENST00000475288 TBC1D16Q8TBP0 767 aa23.14■■□□□ 1.29
PCGF3-209ENST00000475288 ZNF408Q9H9D4 720 aa23.14■■□□□ 1.29
PCGF3-209ENST00000475288 MBIPQ9NS73 344 aa23.14■■□□□ 1.29
PCGF3-209ENST00000475288 RTL9Q8NET4 1388 aa23.14■■□□□ 1.29
PCGF3-209ENST00000475288 DDX10Q13206 875 aaKnown RBP23.13■■□□□ 1.29
PCGF3-209ENST00000475288 SAMD7Q7Z3H4 446 aa23.13■■□□□ 1.29
PCGF3-209ENST00000475288 USP48Q86UV5 1035 aa23.13■■□□□ 1.29
PCGF3-209ENST00000475288 GOLGA2Q08379 1002 aa23.12■■□□□ 1.29
PCGF3-209ENST00000475288 IFT57Q9NWB7 429 aa23.12■■□□□ 1.29
PCGF3-209ENST00000475288 RIMBP2O15034 1052 aa23.11■■□□□ 1.29
PCGF3-209ENST00000475288 RGS19P49795 217 aa23.11■■□□□ 1.29
PCGF3-209ENST00000475288 HUNKP57058 714 aa23.11■■□□□ 1.29
PCGF3-209ENST00000475288 CALD1Q05682 793 aaKnown RBP23.11■■□□□ 1.29
PCGF3-209ENST00000475288 KRT26Q7Z3Y9 468 aa23.11■■□□□ 1.29
PCGF3-209ENST00000475288 RIC3Q7Z5B4 369 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms