RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 CTSWP56202 376 aa12.8□□□□□ -0.36
TSPAN1-206ENST00000475163 SF3B3Q15393 1217 aaKnown RBP12.8□□□□□ -0.36
TSPAN1-206ENST00000475163 C3orf67Q6ZVT6 689 aa12.8□□□□□ -0.36
TSPAN1-206ENST00000475163 RPGRQ92834 1020 aaKnown RBP12.8□□□□□ -0.36
TSPAN1-206ENST00000475163 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
TSPAN1-206ENST00000475163 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 DPEP1P16444 411 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 CHRNA5P30532 468 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 FOXO4P98177 505 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 CRY2Q49AN0 593 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 RBM17Q96I25 401 aaKnown RBP12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 SYT17Q9BSW7 474 aa12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 LRRFIP2Q9Y608 721 aaKnown RBP12.79□□□□□ -0.36
TSPAN1-206ENST00000475163 UTRNP46939 3433 aa12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 CSF1RP07333 972 aa12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 SRGNP10124 158 aa12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 NPR1P16066 1061 aa12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 EPHA10Q5JZY3 1008 aa12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 STYK1Q6J9G0 422 aa12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 LMBR1LQ6UX01 489 aa12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 DDX46Q7L014 1031 aaKnown RBP12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 BICC1Q9H694 974 aaKnown RBP12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 CHMP3Q9Y3E7 222 aa12.78□□□□□ -0.36
TSPAN1-206ENST00000475163 ALDH1B1P30837 517 aa12.77□□□□□ -0.37
TSPAN1-206ENST00000475163 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
TSPAN1-206ENST00000475163 RABL6Q3YEC7 729 aaPredicted RBP12.77□□□□□ -0.37
TSPAN1-206ENST00000475163 CNKSR1Q969H4 720 aa12.77□□□□□ -0.37
TSPAN1-206ENST00000475163 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
TSPAN1-206ENST00000475163 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
TSPAN1-206ENST00000475163 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
TSPAN1-206ENST00000475163 MYH3P11055 1940 aa12.76□□□□□ -0.37
TSPAN1-206ENST00000475163 KCNA3P22001 575 aa12.76□□□□□ -0.37
TSPAN1-206ENST00000475163 IRX6P78412 446 aaPredicted RBP12.76□□□□□ -0.37
TSPAN1-206ENST00000475163 ANKRD44Q8N8A2 993 aa12.76□□□□□ -0.37
TSPAN1-206ENST00000475163 GREM2Q9H772 168 aa12.76□□□□□ -0.37
TSPAN1-206ENST00000475163 C1orf115Q9H7X2 142 aa12.76□□□□□ -0.37
TSPAN1-206ENST00000475163 COL11A2P13942 1736 aaPredicted RBP12.76□□□□□ -0.37
TSPAN1-206ENST00000475163 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 ITGA6P23229 1130 aa12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 IFIT5Q13325 482 aaKnown RBP12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 GRAPQ13588 217 aa12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 TTLL6Q8N841 843 aa12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 RTL9Q8NET4 1388 aa12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 GRAPLQ8TC17 118 aaPredicted RBP12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 KIAA1551Q9HCM1 1747 aa12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 GOLGB1Q14789 3259 aaKnown RBP12.75□□□□□ -0.37
TSPAN1-206ENST00000475163 DLEC1Q9Y238 1755 aa12.74□□□□□ -0.37
TSPAN1-206ENST00000475163 BBOX1O75936 387 aa12.74□□□□□ -0.37
TSPAN1-206ENST00000475163 DALRD3Q5D0E6 543 aaKnown RBP12.74□□□□□ -0.37
TSPAN1-206ENST00000475163 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
TSPAN1-206ENST00000475163 EXOC6Q8TAG9 804 aa12.74□□□□□ -0.37
TSPAN1-206ENST00000475163 CDC5LQ99459 802 aaKnown RBP12.74□□□□□ -0.37
TSPAN1-206ENST00000475163 SEC31BQ9NQW1 1179 aa12.74□□□□□ -0.37
TSPAN1-206ENST00000475163 SRGAP3O43295 1099 aa12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 NEFLP07196 543 aa12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 IGHMBP2P38935 993 aaKnown RBP12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 RPS8P62241 208 aaKnown RBP12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 MTX1Q13505 466 aa12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 AAMPQ13685 434 aa12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 ANKRD18AQ8IVF6 992 aa12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 RPAP2Q8IXW5 612 aaPredicted RBP12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 CELF1Q92879 486 aaKnown RBP12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 WWC3Q9ULE0 1092 aa12.73□□□□□ -0.37
TSPAN1-206ENST00000475163 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
TSPAN1-206ENST00000475163 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
TSPAN1-206ENST00000475163 CEP85Q6P2H3 762 aa12.72□□□□□ -0.37
TSPAN1-206ENST00000475163 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
TSPAN1-206ENST00000475163 MPHOSPH8Q99549 860 aa12.72□□□□□ -0.37
TSPAN1-206ENST00000475163 TMX4Q9H1E5 349 aaPredicted RBP12.72□□□□□ -0.37
TSPAN1-206ENST00000475163 BCS1LQ9Y276 419 aa12.72□□□□□ -0.37
TSPAN1-206ENST00000475163 ZNF594Q96JF6 807 aaPredicted RBP12.71□□□□□ -0.37
TSPAN1-206ENST00000475163 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
TSPAN1-206ENST00000475163 BRCA1P38398 1863 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 PNMA6EA0A0J9YXQ4 647 aa12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 HMMRO75330 724 aa12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 RFX5P48382 616 aaPredicted RBP12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 GPR162Q16538 588 aa12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 SP8Q8IXZ3 490 aa12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 CNNM1Q9NRU3 951 aa12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 ATP6V0A2Q9Y487 856 aa12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 TAF1P21675 1872 aa12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 CACNA1SQ13698 1873 aa12.7□□□□□ -0.38
TSPAN1-206ENST00000475163 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
TSPAN1-206ENST00000475163 C21orf2O43822 256 aa12.69□□□□□ -0.38
TSPAN1-206ENST00000475163 PTPN12Q05209 780 aaKnown RBP12.69□□□□□ -0.38
TSPAN1-206ENST00000475163 POLA2Q14181 598 aa12.69□□□□□ -0.38
TSPAN1-206ENST00000475163 SOGA3Q5TF21 947 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms