RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 A6NJR5 290 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 INHBCP55103 352 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 HNRNPH2P55795 449 aaKnown RBP5.81□□□□□ -1.48
NPHP3-206ENST00000474871 FILIP1Q7Z7B0 1213 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 NT5DC4Q86YG4 428 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 NELL1Q92832 810 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 RBM17Q96I25 401 aaKnown RBP5.81□□□□□ -1.48
NPHP3-206ENST00000474871 C1orf74Q96LT6 269 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 PRR12Q9ULL5 1215 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 HECW2Q9P2P5 1572 aa5.81□□□□□ -1.48
NPHP3-206ENST00000474871 ATP10AO60312 1499 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 PLEKHG2Q9H7P9 1386 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 SPTLC2O15270 562 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 PYGLP06737 847 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 SRGNP10124 158 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 CYP2C19P33261 490 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 NAP1L1P55209 391 aaKnown RBP5.8□□□□□ -1.48
NPHP3-206ENST00000474871 MUM1L1Q5H9M0 696 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 B4GALNT3Q6L9W6 998 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 PRIMPOLQ96LW4 560 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 CEP63Q96MT8 703 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 SERINC2Q96SA4 455 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 CD248Q9HCU0 757 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 ITM2BQ9Y287 266 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 TET3O43151 1660 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 UHRF1BP1Q6BDS2 1440 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 CD109Q6YHK3 1445 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 BCORL1Q5H9F3 1711 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 DHX29Q7Z478 1369 aaKnown RBP5.8□□□□□ -1.48
NPHP3-206ENST00000474871 SLF2Q8IX21 1173 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 RABGGTAQ92696 567 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 NELL2Q99435 816 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 PLA2R1Q13018 1463 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 RNF17Q9BXT8 1623 aaKnown RBP5.8□□□□□ -1.48
NPHP3-206ENST00000474871 TRIM66O15016 1216 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 RAPGEF3O95398 923 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 MYL1P05976 194 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 SKIV2LQ15477 1246 aaKnown RBP5.8□□□□□ -1.48
NPHP3-206ENST00000474871 ALDH1L2Q3SY69 923 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 AFAP1Q8N556 730 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 WDR70Q9NW82 654 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 DIP2BQ9P265 1576 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 SPHKAPQ2M3C7 1700 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 IL4RP24394 825 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 PLBD1Q6P4A8 553 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 SLC43A3Q8NBI5 491 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 MRRFQ96E11 262 aaKnown RBP5.8□□□□□ -1.48
NPHP3-206ENST00000474871 JRKLQ9Y4A0 524 aa5.8□□□□□ -1.48
NPHP3-206ENST00000474871 NEO1Q92859 1461 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 TMEM238LA0A1B0GVL6 79 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 CYP11B2P19099 503 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 NBPF8Q3BBV2 869 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 SPDYCQ5MJ68 293 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 TTC39BQ5VTQ0 682 aaPredicted RBP5.79□□□□□ -1.48
NPHP3-206ENST00000474871 KLHL10Q6JEL2 608 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 NFXL1Q6ZNB6 911 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 MIEF2Q96C03 454 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 GOPCQ9HD26 462 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 GPCPD1Q9NPB8 672 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 ANKIB1Q9P2G1 1089 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.79□□□□□ -1.48
NPHP3-206ENST00000474871 SPO11Q9Y5K1 396 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 ABCA6Q8N139 1617 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 FRMPD1Q5SYB0 1578 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 IBTKQ9P2D0 1353 aaPredicted RBP5.79□□□□□ -1.48
NPHP3-206ENST00000474871 MNX1P50219 401 aaPredicted RBP5.79□□□□□ -1.48
NPHP3-206ENST00000474871 TBX4P57082 545 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 PDAP1Q13442 181 aaKnown RBP5.79□□□□□ -1.48
NPHP3-206ENST00000474871 MCTP2Q6DN12 878 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 ARL10Q8N8L6 244 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 KIF2CQ99661 725 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 FAM117AQ9C073 453 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 ARHGAP31Q2M1Z3 1444 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 CEP152O94986 1710 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 TRPM2O94759 1503 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 RALGAPBQ86X10 1494 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 FOXD2O60548 495 aaPredicted RBP5.79□□□□□ -1.48
NPHP3-206ENST00000474871 SLC7A5P1Q8MH63 180 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 CALCOCO1Q9P1Z2 691 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 GJA3Q9Y6H8 435 aa5.79□□□□□ -1.48
NPHP3-206ENST00000474871 RICTORQ6R327 1708 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 CCDC144AA2RUR9 1427 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 SPATA31E1Q6ZUB1 1445 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 C19orf81C9J6K1 198 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 WDHD1O75717 1129 aaPredicted RBP5.78□□□□□ -1.48
NPHP3-206ENST00000474871 EIF4BP23588 611 aaKnown RBP5.78□□□□□ -1.48
NPHP3-206ENST00000474871 IRX1P78414 480 aaPredicted RBP5.78□□□□□ -1.48
NPHP3-206ENST00000474871 TRAF1Q13077 416 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 CLPPQ16740 277 aaPredicted RBP5.78□□□□□ -1.48
NPHP3-206ENST00000474871 R3HCC1Q9Y3T6 440 aaKnown RBP5.78□□□□□ -1.48
NPHP3-206ENST00000474871 TRPM1Q7Z4N2 1603 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 ANKRD45Q5TZF3 282 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 SASS6Q6UVJ0 657 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 OTUD6AQ7L8S5 288 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 DPH6Q7L8W6 267 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 EFCAB13Q8IY85 973 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 NACA2Q9H009 215 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 ACAD8Q9UKU7 415 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 ODF2LQ9ULJ1 636 aa5.78□□□□□ -1.48
NPHP3-206ENST00000474871 HSPA5P11021 654 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms