RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 ADAMTSL1Q8N6G6 1762 aa18.02■□□□□ 0.48
EPCAM-205ENST00000474691 RAD17O75943 681 aa18.02■□□□□ 0.48
EPCAM-205ENST00000474691 FMR1Q06787 632 aaKnown RBP eCLIP18.02■□□□□ 0.48
EPCAM-205ENST00000474691 TCIRG1Q13488 830 aa18.02■□□□□ 0.48
EPCAM-205ENST00000474691 GRAPQ13588 217 aa18.02■□□□□ 0.48
EPCAM-205ENST00000474691 PDIA6Q15084 440 aa18.02■□□□□ 0.48
EPCAM-205ENST00000474691 RALBP1Q15311 655 aa18.02■□□□□ 0.48
EPCAM-205ENST00000474691 TMC4Q7Z404 712 aa18.02■□□□□ 0.48
EPCAM-205ENST00000474691 GRAPLQ8TC17 118 aaPredicted RBP18.02■□□□□ 0.48
EPCAM-205ENST00000474691 SNED1Q8TER0 1413 aa18.02■□□□□ 0.48
EPCAM-205ENST00000474691 TMPOP42166 694 aaKnown RBP18.01■□□□□ 0.47
EPCAM-205ENST00000474691 KIAA2012Q0VF49 1180 aa18.01■□□□□ 0.47
EPCAM-205ENST00000474691 PROSER3Q2NL68 480 aa18.01■□□□□ 0.47
EPCAM-205ENST00000474691 NLRP10Q86W26 655 aa18.01■□□□□ 0.47
EPCAM-205ENST00000474691 ABHD8Q96I13 439 aa18.01■□□□□ 0.47
EPCAM-205ENST00000474691 RTFDC1Q9BY42 306 aaPredicted RBP18.01■□□□□ 0.47
EPCAM-205ENST00000474691 CDHR2Q9BYE9 1310 aa18■□□□□ 0.47
EPCAM-205ENST00000474691 MAP2K2P36507 400 aa18■□□□□ 0.47
EPCAM-205ENST00000474691 WDR43Q15061 677 aaKnown RBP eCLIP18■□□□□ 0.47
EPCAM-205ENST00000474691 CDC37L1Q7L3B6 337 aa18■□□□□ 0.47
EPCAM-205ENST00000474691 CCDC85CA6NKD9 419 aa17.99■□□□□ 0.47
EPCAM-205ENST00000474691 G3V3G9 751 aa17.99■□□□□ 0.47
EPCAM-205ENST00000474691 DCAF8Q5TAQ9 597 aa17.99■□□□□ 0.47
EPCAM-205ENST00000474691 CST9Q5W186 159 aa17.99■□□□□ 0.47
EPCAM-205ENST00000474691 SLC51AQ86UW1 340 aa17.99■□□□□ 0.47
EPCAM-205ENST00000474691 ZC3H15Q8WU90 426 aaKnown RBP17.99■□□□□ 0.47
EPCAM-205ENST00000474691 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
EPCAM-205ENST00000474691 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
EPCAM-205ENST00000474691 COL4A5P29400 1685 aa17.99■□□□□ 0.47
EPCAM-205ENST00000474691 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
EPCAM-205ENST00000474691 CA12O43570 354 aa17.98■□□□□ 0.47
EPCAM-205ENST00000474691 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
EPCAM-205ENST00000474691 HDGFL1Q5TGJ6 251 aa17.98■□□□□ 0.47
EPCAM-205ENST00000474691 CFAP44Q96MT7 982 aa17.98■□□□□ 0.47
EPCAM-205ENST00000474691 CNOT7Q9UIV1 285 aaKnown RBP17.98■□□□□ 0.47
EPCAM-205ENST00000474691 AOC2O75106 756 aa17.97■□□□□ 0.47
EPCAM-205ENST00000474691 LRP10Q7Z4F1 713 aa17.97■□□□□ 0.47
EPCAM-205ENST00000474691 SAPCD2Q86UD0 394 aa17.97■□□□□ 0.47
EPCAM-205ENST00000474691 CCDC146Q8IYE0 955 aa17.97■□□□□ 0.47
EPCAM-205ENST00000474691 ZNF428Q96B54 188 aa17.97■□□□□ 0.47
EPCAM-205ENST00000474691 EYA3Q99504 573 aa17.97■□□□□ 0.47
EPCAM-205ENST00000474691 HSP90B1P14625 803 aaKnown RBP17.96■□□□□ 0.47
EPCAM-205ENST00000474691 ANKRD13DQ6ZTN6 518 aa17.96■□□□□ 0.47
EPCAM-205ENST00000474691 PLBD2Q8NHP8 589 aa17.96■□□□□ 0.47
EPCAM-205ENST00000474691 CHPF2Q9P2E5 772 aa17.96■□□□□ 0.47
EPCAM-205ENST00000474691 DBF4Q9UBU7 674 aaPredicted RBP17.96■□□□□ 0.47
EPCAM-205ENST00000474691 LTBP1Q14766 1721 aa17.95■□□□□ 0.46
EPCAM-205ENST00000474691 RIMBP2O15034 1052 aa17.95■□□□□ 0.46
EPCAM-205ENST00000474691 MICALL2Q8IY33 904 aa17.95■□□□□ 0.46
EPCAM-205ENST00000474691 HHIPL1Q96JK4 782 aa17.95■□□□□ 0.46
EPCAM-205ENST00000474691 TSKSQ9UJT2 592 aa17.95■□□□□ 0.46
EPCAM-205ENST00000474691 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
EPCAM-205ENST00000474691 RUNDC1Q96C34 613 aa17.94■□□□□ 0.46
EPCAM-205ENST00000474691 DCPSQ96C86 337 aaKnown RBP17.94■□□□□ 0.46
EPCAM-205ENST00000474691 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
EPCAM-205ENST00000474691 ATP5J2-PTCD1G3V325 749 aa17.93■□□□□ 0.46
EPCAM-205ENST00000474691 CHL1O00533 1208 aa17.93■□□□□ 0.46
EPCAM-205ENST00000474691 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
EPCAM-205ENST00000474691 RBM26Q5T8P6 1007 aaKnown RBP17.93■□□□□ 0.46
EPCAM-205ENST00000474691 RIC3Q7Z5B4 369 aa17.93■□□□□ 0.46
EPCAM-205ENST00000474691 USP48Q86UV5 1035 aa17.93■□□□□ 0.46
EPCAM-205ENST00000474691 TRPM4Q8TD43 1214 aa17.93■□□□□ 0.46
EPCAM-205ENST00000474691 DBNDD1Q9H9R9 158 aa17.93■□□□□ 0.46
EPCAM-205ENST00000474691 HYPKQ9NX55 129 aa17.93■□□□□ 0.46
EPCAM-205ENST00000474691 PGAP2Q9UHJ9 254 aa17.93■□□□□ 0.46
EPCAM-205ENST00000474691 HOXB7P09629 217 aa17.92■□□□□ 0.46
EPCAM-205ENST00000474691 BRPF1P55201 1214 aaPredicted RBP17.92■□□□□ 0.46
EPCAM-205ENST00000474691 HUNKP57058 714 aa17.92■□□□□ 0.46
EPCAM-205ENST00000474691 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
EPCAM-205ENST00000474691 NOGQ13253 232 aa17.92■□□□□ 0.46
EPCAM-205ENST00000474691 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
EPCAM-205ENST00000474691 FAM161AQ3B820 660 aa17.92■□□□□ 0.46
EPCAM-205ENST00000474691 C2orf69Q8N8R5 385 aa17.92■□□□□ 0.46
EPCAM-205ENST00000474691 DPF2Q92785 391 aa17.92■□□□□ 0.46
EPCAM-205ENST00000474691 ZC3H12CQ9C0D7 883 aaKnown RBP17.92■□□□□ 0.46
EPCAM-205ENST00000474691 ZBTB12Q9Y330 459 aaPredicted RBP17.92■□□□□ 0.46
EPCAM-205ENST00000474691 TRPM7Q96QT4 1865 aa17.92■□□□□ 0.46
EPCAM-205ENST00000474691 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
EPCAM-205ENST00000474691 PSMD14O00487 310 aa17.91■□□□□ 0.46
EPCAM-205ENST00000474691 RPS12P25398 132 aaKnown RBP17.91■□□□□ 0.46
EPCAM-205ENST00000474691 HIRAP54198 1017 aaPredicted RBP17.91■□□□□ 0.46
EPCAM-205ENST00000474691 MLLT1Q03111 559 aaPredicted RBP17.91■□□□□ 0.46
EPCAM-205ENST00000474691 SF3B3Q15393 1217 aaKnown RBP17.91■□□□□ 0.46
EPCAM-205ENST00000474691 KRT26Q7Z3Y9 468 aa17.91■□□□□ 0.46
EPCAM-205ENST00000474691 YDJCA8MPS7 323 aa17.9■□□□□ 0.46
EPCAM-205ENST00000474691 IRS4O14654 1257 aaPredicted RBP17.9■□□□□ 0.46
EPCAM-205ENST00000474691 ECE2O60344 883 aa17.9■□□□□ 0.46
EPCAM-205ENST00000474691 DOK7Q18PE1 504 aa17.9■□□□□ 0.46
EPCAM-205ENST00000474691 TBC1D10BQ4KMP7 808 aaPredicted RBP17.9■□□□□ 0.46
EPCAM-205ENST00000474691 SAMD7Q7Z3H4 446 aa17.9■□□□□ 0.46
EPCAM-205ENST00000474691 CELF1Q92879 486 aaKnown RBP17.9■□□□□ 0.46
EPCAM-205ENST00000474691 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
EPCAM-205ENST00000474691 RPS8P62241 208 aaKnown RBP17.89■□□□□ 0.45
EPCAM-205ENST00000474691 DUSP27Q5VZP5 1158 aa17.89■□□□□ 0.45
EPCAM-205ENST00000474691 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
EPCAM-205ENST00000474691 GPSM2P81274 684 aa17.88■□□□□ 0.45
EPCAM-205ENST00000474691 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
EPCAM-205ENST00000474691 DGKZQ13574 1117 aa17.88■□□□□ 0.45
EPCAM-205ENST00000474691 SULF1Q8IWU6 871 aa17.88■□□□□ 0.45
EPCAM-205ENST00000474691 ISCA1Q9BUE6 129 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms