RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 CLEC4GQ6UXB4 293 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 NPM2Q86SE8 214 aaKnown RBP7.81□□□□□ -1.16
CPSF7-210ENST00000474684 TAOK3Q9H2K8 898 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 RRAGCQ9HB90 399 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 ZSWIM6Q9HCJ5 1215 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 TSPYL4Q9UJ04 414 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 ZNF652Q9Y2D9 606 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 KDM2BQ8NHM5 1336 aa7.8□□□□□ -1.16
CPSF7-210ENST00000474684 LTBP3Q9NS15 1303 aa7.8□□□□□ -1.16
CPSF7-210ENST00000474684 POTECB2RU33 542 aa7.8□□□□□ -1.16
CPSF7-210ENST00000474684 RBM46Q8TBY0 533 aaKnown RBP7.8□□□□□ -1.16
CPSF7-210ENST00000474684 PNISRQ8TF01 805 aaKnown RBP7.8□□□□□ -1.16
CPSF7-210ENST00000474684 C7orf43Q8WVR3 580 aa7.8□□□□□ -1.16
CPSF7-210ENST00000474684 NECTIN2Q92692 538 aa7.8□□□□□ -1.16
CPSF7-210ENST00000474684 MASTLQ96GX5 879 aa7.8□□□□□ -1.16
CPSF7-210ENST00000474684 ZNF541Q9H0D2 1346 aa7.79□□□□□ -1.16
CPSF7-210ENST00000474684 KLRG2A4D1S0 409 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-210ENST00000474684 GLTPD2A6NH11 291 aa7.79□□□□□ -1.16
CPSF7-210ENST00000474684 RGL2O15211 777 aa7.79□□□□□ -1.16
CPSF7-210ENST00000474684 NTSR2O95665 410 aa7.79□□□□□ -1.16
CPSF7-210ENST00000474684 NEUROD2Q15784 382 aa7.79□□□□□ -1.16
CPSF7-210ENST00000474684 ERFEQ4G0M1 354 aa7.79□□□□□ -1.16
CPSF7-210ENST00000474684 ZNF687Q8N1G0 1237 aa7.79□□□□□ -1.16
CPSF7-210ENST00000474684 CNKSR1Q969H4 720 aa7.79□□□□□ -1.16
CPSF7-210ENST00000474684 ZNF428Q96B54 188 aa7.79□□□□□ -1.16
CPSF7-210ENST00000474684 PRKRIP1Q9H875 184 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-210ENST00000474684 ERBB4Q15303 1308 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 NPR1P16066 1061 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 EIF2S2P20042 333 aaKnown RBP7.78□□□□□ -1.16
CPSF7-210ENST00000474684 CRY2Q49AN0 593 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 CCDC184Q52MB2 194 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 CCDC93Q567U6 631 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 SUSD4Q5VX71 490 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 KIF6Q6ZMV9 814 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 FBXO3Q9UK99 471 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 ADAMTS8Q9UP79 889 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 PDZRN3Q9UPQ7 1066 aa7.78□□□□□ -1.16
CPSF7-210ENST00000474684 ERVV-1B6SEH8 477 aa7.77□□□□□ -1.17
CPSF7-210ENST00000474684 DDNO94850 711 aaPredicted RBP7.77□□□□□ -1.17
CPSF7-210ENST00000474684 APLP1P51693 650 aa7.77□□□□□ -1.17
CPSF7-210ENST00000474684 PDAP1Q13442 181 aaKnown RBP7.77□□□□□ -1.17
CPSF7-210ENST00000474684 WDR43Q15061 677 aaKnown RBP eCLIP7.77□□□□□ -1.17
CPSF7-210ENST00000474684 VARS2Q5ST30 1063 aaKnown RBP7.77□□□□□ -1.17
CPSF7-210ENST00000474684 GIGYF2Q6Y7W6 1299 aaKnown RBP7.77□□□□□ -1.17
CPSF7-210ENST00000474684 C16orf71Q8IYS4 520 aaPredicted RBP7.77□□□□□ -1.17
CPSF7-210ENST00000474684 ZNF34Q8IZ26 560 aa7.77□□□□□ -1.17
CPSF7-210ENST00000474684 DNAJC5GQ8N7S2 189 aa7.77□□□□□ -1.17
CPSF7-210ENST00000474684 XAGE3Q8WTP9 111 aa7.77□□□□□ -1.17
CPSF7-210ENST00000474684 RUNDC1Q96C34 613 aa7.77□□□□□ -1.17
CPSF7-210ENST00000474684 ZNF277Q9NRM2 450 aaPredicted RBP7.77□□□□□ -1.17
CPSF7-210ENST00000474684 THSD7BQ9C0I4 1608 aa7.77□□□□□ -1.17
CPSF7-210ENST00000474684 CHL1O00533 1208 aa7.76□□□□□ -1.17
CPSF7-210ENST00000474684 FKBP4Q02790 459 aaKnown RBP eCLIP7.76□□□□□ -1.17
CPSF7-210ENST00000474684 LMOD3Q0VAK6 560 aa7.76□□□□□ -1.17
CPSF7-210ENST00000474684 TPTE2Q6XPS3 522 aa7.76□□□□□ -1.17
CPSF7-210ENST00000474684 SYNE4Q8N205 404 aa7.76□□□□□ -1.17
CPSF7-210ENST00000474684 CHPF2Q9P2E5 772 aa7.76□□□□□ -1.17
CPSF7-210ENST00000474684 ABCC4O15439 1325 aa7.76□□□□□ -1.17
CPSF7-210ENST00000474684 TCERG1O14776 1098 aaKnown RBP7.75□□□□□ -1.17
CPSF7-210ENST00000474684 VEGFAP15692 232 aaPredicted RBP7.75□□□□□ -1.17
CPSF7-210ENST00000474684 GTF2E1P29083 439 aaPredicted RBP7.75□□□□□ -1.17
CPSF7-210ENST00000474684 FSTL1Q12841 308 aa7.75□□□□□ -1.17
CPSF7-210ENST00000474684 AIMP1Q12904 312 aaKnown RBP7.75□□□□□ -1.17
CPSF7-210ENST00000474684 COPS6Q7L5N1 327 aa7.75□□□□□ -1.17
CPSF7-210ENST00000474684 SMC1BQ8NDV3 1235 aa7.75□□□□□ -1.17
CPSF7-210ENST00000474684 NYXQ9GZU5 481 aa7.75□□□□□ -1.17
CPSF7-210ENST00000474684 PNNQ9H307 717 aaKnown RBP7.75□□□□□ -1.17
CPSF7-210ENST00000474684 MBIPQ9NS73 344 aa7.75□□□□□ -1.17
CPSF7-210ENST00000474684 LAS1LQ9Y4W2 734 aaKnown RBP7.75□□□□□ -1.17
CPSF7-210ENST00000474684 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
CPSF7-210ENST00000474684 PPEF1O14829 653 aaPredicted RBP7.74□□□□□ -1.17
CPSF7-210ENST00000474684 IARSP41252 1262 aaKnown RBP7.74□□□□□ -1.17
CPSF7-210ENST00000474684 SOGA3Q5TF21 947 aa7.74□□□□□ -1.17
CPSF7-210ENST00000474684 HDGFL1Q5TGJ6 251 aa7.74□□□□□ -1.17
CPSF7-210ENST00000474684 DPY19L2Q6NUT2 758 aa7.74□□□□□ -1.17
CPSF7-210ENST00000474684 NLRP10Q86W26 655 aa7.74□□□□□ -1.17
CPSF7-210ENST00000474684 RPGRQ92834 1020 aaKnown RBP7.74□□□□□ -1.17
CPSF7-210ENST00000474684 KLRG1Q96E93 195 aa7.74□□□□□ -1.17
CPSF7-210ENST00000474684 BABAM1Q9NWV8 329 aa7.74□□□□□ -1.17
CPSF7-210ENST00000474684 APAF1O14727 1248 aa7.73□□□□□ -1.17
CPSF7-210ENST00000474684 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
CPSF7-210ENST00000474684 HOXA10P31260 410 aaPredicted RBP7.73□□□□□ -1.17
CPSF7-210ENST00000474684 PARP10Q53GL7 1025 aa7.73□□□□□ -1.17
CPSF7-210ENST00000474684 DDX21Q9NR30 783 aaKnown RBP eCLIP7.73□□□□□ -1.17
CPSF7-210ENST00000474684 FZD9O00144 591 aa7.72□□□□□ -1.17
CPSF7-210ENST00000474684 ZNF853P0CG23 659 aa7.72□□□□□ -1.17
CPSF7-210ENST00000474684 ALDH1B1P30837 517 aa7.72□□□□□ -1.17
CPSF7-210ENST00000474684 DUSP27Q5VZP5 1158 aa7.72□□□□□ -1.17
CPSF7-210ENST00000474684 CFAP44Q96MT7 982 aa7.72□□□□□ -1.17
CPSF7-210ENST00000474684 CRAMP1Q96RY5 1269 aa7.72□□□□□ -1.17
CPSF7-210ENST00000474684 PSMD1Q99460 953 aa7.72□□□□□ -1.17
CPSF7-210ENST00000474684 UTP14AQ9BVJ6 771 aaKnown RBP7.72□□□□□ -1.17
CPSF7-210ENST00000474684 TAF1DQ9H5J8 278 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-210ENST00000474684 ECM29Q5VYK3 1845 aa7.71□□□□□ -1.17
CPSF7-210ENST00000474684 ATP5J2-PTCD1G3V325 749 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 ELL2O00472 640 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-210ENST00000474684 HOXB7P09629 217 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 SCNN1DP51172 638 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 TCIRG1Q13488 830 aa7.71□□□□□ -1.18
CPSF7-210ENST00000474684 AOC3Q16853 763 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms