RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 SCNN1DP51172 638 aa10.35□□□□□ -0.75
VPS50-211ENST00000474412 TMEM214Q6NUQ4 689 aaKnown RBP10.35□□□□□ -0.75
VPS50-211ENST00000474412 TRIM50Q86XT4 487 aa10.35□□□□□ -0.75
VPS50-211ENST00000474412 MST1RQ04912 1400 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 PTCH1Q13635 1447 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 PRAG1Q86YV5 1406 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 LRP6O75581 1613 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 MARF1Q9Y4F3 1742 aaKnown RBP10.34□□□□□ -0.75
VPS50-211ENST00000474412 WASLO00401 505 aaPredicted RBP10.34□□□□□ -0.75
VPS50-211ENST00000474412 INHAP05111 366 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 GNASQ5JWF2 1037 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 NBPF10Q6P3W6 841 aaKnown RBP10.34□□□□□ -0.75
VPS50-211ENST00000474412 TAS1R3Q7RTX0 852 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 TFIP11Q9UBB9 837 aaKnown RBP10.34□□□□□ -0.75
VPS50-211ENST00000474412 SERTAD1Q9UHV2 236 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 PCDHGA11Q9Y5H2 935 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 HRH3Q9Y5N1 445 aa10.34□□□□□ -0.75
VPS50-211ENST00000474412 PIK3C2GO75747 1445 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 SPATA31C2B4DYI2 1134 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 ITGA6P23229 1130 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 LCE2CQ5TA81 110 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 MPHOSPH9Q99550 1183 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 FHDC1Q9C0D6 1143 aaPredicted RBP10.33□□□□□ -0.76
VPS50-211ENST00000474412 ZMYND15Q9H091 742 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 AMOTL2Q9Y2J4 779 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 MYOM2P54296 1465 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 ABCA3Q99758 1704 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 DCCP43146 1447 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 NCOA3Q9Y6Q9 1424 aa10.33□□□□□ -0.76
VPS50-211ENST00000474412 NRXN1Q9ULB1 1477 aa10.32□□□□□ -0.76
VPS50-211ENST00000474412 ROBO2Q9HCK4 1378 aa10.32□□□□□ -0.76
VPS50-211ENST00000474412 CDC14CA4D256 554 aa10.32□□□□□ -0.76
VPS50-211ENST00000474412 PALM3A6NDB9 673 aaPredicted RBP10.32□□□□□ -0.76
VPS50-211ENST00000474412 ATP1A2P50993 1020 aa10.32□□□□□ -0.76
VPS50-211ENST00000474412 MAFBQ9Y5Q3 323 aaPredicted RBP10.32□□□□□ -0.76
VPS50-211ENST00000474412 USP32Q8NFA0 1604 aa10.32□□□□□ -0.76
VPS50-211ENST00000474412 ADGRF5Q8IZF2 1346 aa10.32□□□□□ -0.76
VPS50-211ENST00000474412 TMEM229AB2RXF0 380 aa10.31□□□□□ -0.76
VPS50-211ENST00000474412 VSIG8P0DPA2 414 aa10.31□□□□□ -0.76
VPS50-211ENST00000474412 GMPRP36959 345 aa10.31□□□□□ -0.76
VPS50-211ENST00000474412 PHKA2P46019 1235 aa10.31□□□□□ -0.76
VPS50-211ENST00000474412 GAS2L1Q99501 681 aaPredicted RBP10.31□□□□□ -0.76
VPS50-211ENST00000474412 PPP1R12CQ9BZL4 782 aa10.31□□□□□ -0.76
VPS50-211ENST00000474412 TIMMDC1Q9NPL8 285 aa10.31□□□□□ -0.76
VPS50-211ENST00000474412 MKRN1Q9UHC7 482 aaKnown RBP10.31□□□□□ -0.76
VPS50-211ENST00000474412 WDR44Q5JSH3 913 aa10.3□□□□□ -0.76
VPS50-211ENST00000474412 RIPOR1Q6ZS17 1223 aa10.3□□□□□ -0.76
VPS50-211ENST00000474412 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
VPS50-211ENST00000474412 DYRK1BQ9Y463 629 aa10.3□□□□□ -0.76
VPS50-211ENST00000474412 ADGRB1O14514 1584 aa10.3□□□□□ -0.76
VPS50-211ENST00000474412 KIF1AQ12756 1690 aa10.29□□□□□ -0.76
VPS50-211ENST00000474412 BACH1O14867 736 aa10.29□□□□□ -0.76
VPS50-211ENST00000474412 SMTNP53814 917 aa10.29□□□□□ -0.76
VPS50-211ENST00000474412 OGFOD1Q8N543 542 aa10.29□□□□□ -0.76
VPS50-211ENST00000474412 DNAAF2Q9NVR5 837 aaKnown RBP10.29□□□□□ -0.76
VPS50-211ENST00000474412 COL22A1Q8NFW1 1626 aaPredicted RBP10.29□□□□□ -0.76
VPS50-211ENST00000474412 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 TECPR2O15040 1411 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 CLDN10P78369 228 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 RGL3Q3MIN7 710 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 C4orf17Q53FE4 359 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 SV2AQ7L0J3 742 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 VWA5B2Q8N398 1253 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.28□□□□□ -0.76
VPS50-211ENST00000474412 TPCN2Q8NHX9 752 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 RHBDD1Q8TEB9 315 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 ZNF358Q9NW07 568 aa10.28□□□□□ -0.76
VPS50-211ENST00000474412 PLEKHH1Q9ULM0 1364 aa10.27□□□□□ -0.76
VPS50-211ENST00000474412 KIAA1210Q9ULL0 1709 aa10.27□□□□□ -0.76
VPS50-211ENST00000474412 WIPF1O43516 503 aa10.27□□□□□ -0.77
VPS50-211ENST00000474412 LMOD1P29536 600 aaPredicted RBP10.27□□□□□ -0.77
VPS50-211ENST00000474412 NANOS1Q8WY41 292 aaKnown RBP10.27□□□□□ -0.77
VPS50-211ENST00000474412 ZNF594Q96JF6 807 aaPredicted RBP10.27□□□□□ -0.77
VPS50-211ENST00000474412 SLAIN2Q9P270 581 aa10.27□□□□□ -0.77
VPS50-211ENST00000474412 KIAA1024Q9UPX6 916 aa10.27□□□□□ -0.77
VPS50-211ENST00000474412 RBM19Q9Y4C8 960 aaKnown RBP10.27□□□□□ -0.77
VPS50-211ENST00000474412 C1orf167Q5SNV9 1468 aa10.27□□□□□ -0.77
VPS50-211ENST00000474412 ITSN1Q15811 1721 aa10.27□□□□□ -0.77
VPS50-211ENST00000474412 ANKRD30BQ9BXX2 1392 aa10.26□□□□□ -0.77
VPS50-211ENST00000474412 A6NJY4 79 aa10.26□□□□□ -0.77
VPS50-211ENST00000474412 CCDC102BQ68D86 513 aa10.26□□□□□ -0.77
VPS50-211ENST00000474412 SLC4A9Q96Q91 983 aa10.26□□□□□ -0.77
VPS50-211ENST00000474412 GPAMQ9HCL2 828 aa10.26□□□□□ -0.77
VPS50-211ENST00000474412 CUEDC1Q9NWM3 386 aaPredicted RBP10.26□□□□□ -0.77
VPS50-211ENST00000474412 CRYBG1Q9Y4K1 1723 aa10.26□□□□□ -0.77
VPS50-211ENST00000474412 RPGRIP1LQ68CZ1 1315 aa10.26□□□□□ -0.77
VPS50-211ENST00000474412 YTHDC2Q9H6S0 1430 aaKnown RBP10.25□□□□□ -0.77
VPS50-211ENST00000474412 TOPAZ1Q8N9V7 1692 aa10.25□□□□□ -0.77
VPS50-211ENST00000474412 RASA1P20936 1047 aa10.25□□□□□ -0.77
VPS50-211ENST00000474412 PLA2G4AP47712 749 aa10.25□□□□□ -0.77
VPS50-211ENST00000474412 BRINP3Q76B58 766 aa10.25□□□□□ -0.77
VPS50-211ENST00000474412 LARGE2Q8N3Y3 721 aa10.25□□□□□ -0.77
VPS50-211ENST00000474412 DDX17Q92841 729 aaKnown RBP10.25□□□□□ -0.77
VPS50-211ENST00000474412 C19orf44Q9H6X5 657 aa10.25□□□□□ -0.77
VPS50-211ENST00000474412 TRPM3Q9HCF6 1732 aaPredicted RBP10.24□□□□□ -0.77
VPS50-211ENST00000474412 DLC1Q96QB1 1528 aa10.24□□□□□ -0.77
VPS50-211ENST00000474412 A0A1B0GTH6 734 aa10.24□□□□□ -0.77
VPS50-211ENST00000474412 H7C1W4 665 aa10.24□□□□□ -0.77
VPS50-211ENST00000474412 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms