RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 EIF5BO60841 1220 aaKnown RBP17■□□□□ 0.31
LDLRAP1-204ENST00000474283 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
LDLRAP1-204ENST00000474283 KAZALD1Q96I82 304 aa17■□□□□ 0.31
LDLRAP1-204ENST00000474283 NLRP3Q96P20 1036 aa17■□□□□ 0.31
LDLRAP1-204ENST00000474283 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
LDLRAP1-204ENST00000474283 PTGER2P43116 358 aa16.99■□□□□ 0.31
LDLRAP1-204ENST00000474283 CTSWP56202 376 aa16.99■□□□□ 0.31
LDLRAP1-204ENST00000474283 FOXO4P98177 505 aa16.99■□□□□ 0.31
LDLRAP1-204ENST00000474283 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
LDLRAP1-204ENST00000474283 LMBR1LQ6UX01 489 aa16.99■□□□□ 0.31
LDLRAP1-204ENST00000474283 SMC5Q8IY18 1101 aa16.99■□□□□ 0.31
LDLRAP1-204ENST00000474283 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
LDLRAP1-204ENST00000474283 PLA2G12BQ9BX93 195 aa16.99■□□□□ 0.31
LDLRAP1-204ENST00000474283 KIAA1551Q9HCM1 1747 aa16.99■□□□□ 0.31
LDLRAP1-204ENST00000474283 RIC1Q4ADV7 1423 aa16.98■□□□□ 0.31
LDLRAP1-204ENST00000474283 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
LDLRAP1-204ENST00000474283 ANKRD44Q8N8A2 993 aa16.98■□□□□ 0.31
LDLRAP1-204ENST00000474283 SGIP1Q9BQI5 828 aa16.98■□□□□ 0.31
LDLRAP1-204ENST00000474283 BRIP1Q9BX63 1249 aa16.98■□□□□ 0.31
LDLRAP1-204ENST00000474283 PPP1R1BQ9UD71 204 aaPredicted RBP16.98■□□□□ 0.31
LDLRAP1-204ENST00000474283 C10orf71Q711Q0 1435 aa16.97■□□□□ 0.31
LDLRAP1-204ENST00000474283 BRCA1P38398 1863 aaKnown RBP16.97■□□□□ 0.31
LDLRAP1-204ENST00000474283 IGHDP01880 384 aa16.96■□□□□ 0.31
LDLRAP1-204ENST00000474283 PDE6BP35913 854 aa16.96■□□□□ 0.31
LDLRAP1-204ENST00000474283 CCDC152Q4G0S7 254 aa16.96■□□□□ 0.31
LDLRAP1-204ENST00000474283 HSP90AB4PQ58FF6 505 aa16.96■□□□□ 0.31
LDLRAP1-204ENST00000474283 CEP85Q6P2H3 762 aa16.96■□□□□ 0.31
LDLRAP1-204ENST00000474283 TTLL11Q8NHH1 800 aa16.96■□□□□ 0.31
LDLRAP1-204ENST00000474283 A0A1B0GUL6 1792 aa16.96■□□□□ 0.31
LDLRAP1-204ENST00000474283 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
LDLRAP1-204ENST00000474283 FAM161AQ3B820 660 aa16.95■□□□□ 0.3
LDLRAP1-204ENST00000474283 RPGRQ92834 1020 aaKnown RBP16.95■□□□□ 0.3
LDLRAP1-204ENST00000474283 GREM2Q9H772 168 aa16.95■□□□□ 0.3
LDLRAP1-204ENST00000474283 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
LDLRAP1-204ENST00000474283 CSF1RP07333 972 aa16.94■□□□□ 0.3
LDLRAP1-204ENST00000474283 ATP8B2P98198 1209 aa16.94■□□□□ 0.3
LDLRAP1-204ENST00000474283 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
LDLRAP1-204ENST00000474283 CCDC57Q2TAC2 916 aa16.94■□□□□ 0.3
LDLRAP1-204ENST00000474283 RABL6Q3YEC7 729 aaPredicted RBP16.94■□□□□ 0.3
LDLRAP1-204ENST00000474283 C2CD5Q86YS7 1000 aa16.94■□□□□ 0.3
LDLRAP1-204ENST00000474283 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
LDLRAP1-204ENST00000474283 H0YIN7 160 aa16.93■□□□□ 0.3
LDLRAP1-204ENST00000474283 ITGA6P23229 1130 aa16.93■□□□□ 0.3
LDLRAP1-204ENST00000474283 IFIT5Q13325 482 aaKnown RBP16.93■□□□□ 0.3
LDLRAP1-204ENST00000474283 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
LDLRAP1-204ENST00000474283 COL4A1P02462 1669 aa16.93■□□□□ 0.3
LDLRAP1-204ENST00000474283 ANKRD18BA2A2Z9 1011 aa16.92■□□□□ 0.3
LDLRAP1-204ENST00000474283 CHRNA5P30532 468 aa16.92■□□□□ 0.3
LDLRAP1-204ENST00000474283 NUCB1Q02818 461 aa16.92■□□□□ 0.3
LDLRAP1-204ENST00000474283 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
LDLRAP1-204ENST00000474283 SEC31BQ9NQW1 1179 aa16.92■□□□□ 0.3
LDLRAP1-204ENST00000474283 MTX1Q13505 466 aa16.91■□□□□ 0.3
LDLRAP1-204ENST00000474283 CRY2Q49AN0 593 aa16.91■□□□□ 0.3
LDLRAP1-204ENST00000474283 CHD1LQ86WJ1 897 aa16.91■□□□□ 0.3
LDLRAP1-204ENST00000474283 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
LDLRAP1-204ENST00000474283 ZNF622Q969S3 477 aaKnown RBP eCLIP16.91■□□□□ 0.3
LDLRAP1-204ENST00000474283 RBM17Q96I25 401 aaKnown RBP16.91■□□□□ 0.3
LDLRAP1-204ENST00000474283 DCTPP1Q9H773 170 aa16.91■□□□□ 0.3
LDLRAP1-204ENST00000474283 PDZRN3Q9UPQ7 1066 aa16.91■□□□□ 0.3
LDLRAP1-204ENST00000474283 RTL9Q8NET4 1388 aa16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 KLRG2A4D1S0 409 aaPredicted RBP16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 SRGNP10124 158 aa16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 NPR1P16066 1061 aa16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 RGS3P49796 1198 aa16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 MASTLQ96GX5 879 aa16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 ZNF594Q96JF6 807 aaPredicted RBP16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 CDC5LQ99459 802 aaKnown RBP16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 CD2APQ9Y5K6 639 aa16.9■□□□□ 0.3
LDLRAP1-204ENST00000474283 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
LDLRAP1-204ENST00000474283 RAB11FIP3O75154 756 aa16.89■□□□□ 0.29
LDLRAP1-204ENST00000474283 POLA2Q14181 598 aa16.89■□□□□ 0.29
LDLRAP1-204ENST00000474283 ERC1Q8IUD2 1116 aa16.89■□□□□ 0.29
LDLRAP1-204ENST00000474283 SSH3Q8TE77 659 aa16.89■□□□□ 0.29
LDLRAP1-204ENST00000474283 SIL1Q9H173 461 aa16.89■□□□□ 0.29
LDLRAP1-204ENST00000474283 PA2G4Q9UQ80 394 aaKnown RBP16.89■□□□□ 0.29
LDLRAP1-204ENST00000474283 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
LDLRAP1-204ENST00000474283 LRRC37AA6NMS7 1700 aa16.88■□□□□ 0.29
LDLRAP1-204ENST00000474283 DPEP1P16444 411 aa16.88■□□□□ 0.29
LDLRAP1-204ENST00000474283 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
LDLRAP1-204ENST00000474283 RFX5P48382 616 aaPredicted RBP16.88■□□□□ 0.29
LDLRAP1-204ENST00000474283 TGFB2P61812 414 aa16.88■□□□□ 0.29
LDLRAP1-204ENST00000474283 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
LDLRAP1-204ENST00000474283 ANKRD18AQ8IVF6 992 aa16.88■□□□□ 0.29
LDLRAP1-204ENST00000474283 HOXA10P31260 410 aaPredicted RBP16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 PTPN12Q05209 780 aaKnown RBP16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 GRAPQ13588 217 aa16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 STYK1Q6J9G0 422 aa16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 GRAPLQ8TC17 118 aaPredicted RBP16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 CELF1Q92879 486 aaKnown RBP16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 MPHOSPH8Q99549 860 aa16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 FHDC1Q9C0D6 1143 aaPredicted RBP16.87■□□□□ 0.29
LDLRAP1-204ENST00000474283 CCDC88AQ3V6T2 1871 aa16.86■□□□□ 0.29
LDLRAP1-204ENST00000474283 SURF6O75683 361 aaKnown RBP16.86■□□□□ 0.29
LDLRAP1-204ENST00000474283 ALDH1B1P30837 517 aa16.86■□□□□ 0.29
LDLRAP1-204ENST00000474283 RPS8P62241 208 aaKnown RBP16.86■□□□□ 0.29
LDLRAP1-204ENST00000474283 LDHAL6AQ6ZMR3 332 aa16.86■□□□□ 0.29
LDLRAP1-204ENST00000474283 UPF2Q9HAU5 1272 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms