RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ZNF521Q96K83 1311 aa14.33□□□□□ -0.12
CKS1B-206ENST00000474215 CCER2I3L3R5 266 aa14.32□□□□□ -0.12
CKS1B-206ENST00000474215 FZD9O00144 591 aa14.32□□□□□ -0.12
CKS1B-206ENST00000474215 IGKV5-2P06315 115 aa14.32□□□□□ -0.12
CKS1B-206ENST00000474215 FLIIQ13045 1269 aa14.32□□□□□ -0.12
CKS1B-206ENST00000474215 DPP8Q6V1X1 898 aaPredicted RBP14.32□□□□□ -0.12
CKS1B-206ENST00000474215 MPNDQ8N594 471 aa14.32□□□□□ -0.12
CKS1B-206ENST00000474215 RTFDC1Q9BY42 306 aaPredicted RBP14.32□□□□□ -0.12
CKS1B-206ENST00000474215 VPS33BQ9H267 617 aa14.32□□□□□ -0.12
CKS1B-206ENST00000474215 DICER1Q9UPY3 1922 aaKnown RBP14.32□□□□□ -0.12
CKS1B-206ENST00000474215 FKBP5Q13451 457 aaPredicted RBP14.31□□□□□ -0.12
CKS1B-206ENST00000474215 LARGE2Q8N3Y3 721 aa14.31□□□□□ -0.12
CKS1B-206ENST00000474215 SMC1BQ8NDV3 1235 aa14.31□□□□□ -0.12
CKS1B-206ENST00000474215 SUPT20HQ8NEM7 779 aa14.31□□□□□ -0.12
CKS1B-206ENST00000474215 JARID2Q92833 1246 aaPredicted RBP14.31□□□□□ -0.12
CKS1B-206ENST00000474215 L3MBTL3Q96JM7 780 aaPredicted RBP14.31□□□□□ -0.12
CKS1B-206ENST00000474215 ZNF541Q9H0D2 1346 aa14.31□□□□□ -0.12
CKS1B-206ENST00000474215 CEP350Q5VT06 3117 aa14.3□□□□□ -0.12
CKS1B-206ENST00000474215 PDE8AO60658 829 aa14.3□□□□□ -0.12
CKS1B-206ENST00000474215 RPS8P62241 208 aaKnown RBP14.3□□□□□ -0.12
CKS1B-206ENST00000474215 CWF19L2Q2TBE0 894 aaKnown RBP14.3□□□□□ -0.12
CKS1B-206ENST00000474215 CELF1Q92879 486 aaKnown RBP14.3□□□□□ -0.12
CKS1B-206ENST00000474215 LAMB2P55268 1798 aa14.29□□□□□ -0.12
CKS1B-206ENST00000474215 IQCA1LA6NCM1 817 aa14.29□□□□□ -0.12
CKS1B-206ENST00000474215 NEURL1BA8MQ27 555 aa14.29□□□□□ -0.12
CKS1B-206ENST00000474215 PPIP5K2O43314 1243 aa14.29□□□□□ -0.12
CKS1B-206ENST00000474215 APLP1P51693 650 aa14.29□□□□□ -0.12
CKS1B-206ENST00000474215 EIF6P56537 245 aaKnown RBP14.29□□□□□ -0.12
CKS1B-206ENST00000474215 CCDC152Q4G0S7 254 aa14.29□□□□□ -0.12
CKS1B-206ENST00000474215 GPC2Q8N158 579 aa14.29□□□□□ -0.12
CKS1B-206ENST00000474215 CDHR2Q9BYE9 1310 aa14.29□□□□□ -0.12
CKS1B-206ENST00000474215 DDX60Q8IY21 1712 aaKnown RBP14.29□□□□□ -0.12
CKS1B-206ENST00000474215 WDR90Q96KV7 1748 aa14.29□□□□□ -0.12
CKS1B-206ENST00000474215 H7C1W4 665 aa14.28□□□□□ -0.12
CKS1B-206ENST00000474215 AOC3Q16853 763 aa14.28□□□□□ -0.12
CKS1B-206ENST00000474215 NIM1KQ8IY84 436 aa14.28□□□□□ -0.12
CKS1B-206ENST00000474215 LINS1Q8NG48 757 aa14.28□□□□□ -0.12
CKS1B-206ENST00000474215 DNAAF4Q8WXU2 420 aa14.28□□□□□ -0.12
CKS1B-206ENST00000474215 E9PSI1 815 aa14.27□□□□□ -0.13
CKS1B-206ENST00000474215 GCKRQ14397 625 aa14.27□□□□□ -0.13
CKS1B-206ENST00000474215 TAF1DQ9H5J8 278 aaPredicted RBP14.27□□□□□ -0.13
CKS1B-206ENST00000474215 SEC31BQ9NQW1 1179 aa14.27□□□□□ -0.13
CKS1B-206ENST00000474215 ZNRF3Q9ULT6 936 aa14.27□□□□□ -0.13
CKS1B-206ENST00000474215 NSFL1CQ9UNZ2 370 aaKnown RBP14.27□□□□□ -0.13
CKS1B-206ENST00000474215 COL4A5P29400 1685 aa14.26□□□□□ -0.13
CKS1B-206ENST00000474215 CTSWP56202 376 aa14.26□□□□□ -0.13
CKS1B-206ENST00000474215 KIAA2012Q0VF49 1180 aa14.26□□□□□ -0.13
CKS1B-206ENST00000474215 UBE3BQ7Z3V4 1068 aa14.26□□□□□ -0.13
CKS1B-206ENST00000474215 TTLL11Q8NHH1 800 aa14.26□□□□□ -0.13
CKS1B-206ENST00000474215 CCDC85AQ96PX6 553 aaPredicted RBP14.26□□□□□ -0.13
CKS1B-206ENST00000474215 HACL1Q9UJ83 578 aa14.26□□□□□ -0.13
CKS1B-206ENST00000474215 GJA3Q9Y6H8 435 aa14.26□□□□□ -0.13
CKS1B-206ENST00000474215 GPSM2P81274 684 aa14.25□□□□□ -0.13
CKS1B-206ENST00000474215 SLFN5Q08AF3 891 aa14.25□□□□□ -0.13
CKS1B-206ENST00000474215 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
CKS1B-206ENST00000474215 F6X3S4 739 aa14.24□□□□□ -0.13
CKS1B-206ENST00000474215 C6orf229H3BNL8 230 aa14.24□□□□□ -0.13
CKS1B-206ENST00000474215 WASHC4Q2M389 1173 aa14.24□□□□□ -0.13
CKS1B-206ENST00000474215 BEND3Q5T5X7 828 aa14.24□□□□□ -0.13
CKS1B-206ENST00000474215 ANKRD18AQ8IVF6 992 aa14.24□□□□□ -0.13
CKS1B-206ENST00000474215 POLLQ9UGP5 575 aa14.24□□□□□ -0.13
CKS1B-206ENST00000474215 TAF1P21675 1872 aa14.24□□□□□ -0.13
CKS1B-206ENST00000474215 POTEIP0CG38 1075 aa14.23□□□□□ -0.13
CKS1B-206ENST00000474215 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
CKS1B-206ENST00000474215 EPHX2P34913 555 aa14.23□□□□□ -0.13
CKS1B-206ENST00000474215 CASP7P55210 303 aa14.23□□□□□ -0.13
CKS1B-206ENST00000474215 CXCL9Q07325 125 aa14.23□□□□□ -0.13
CKS1B-206ENST00000474215 PNMA8AQ86V59 439 aaPredicted RBP14.23□□□□□ -0.13
CKS1B-206ENST00000474215 TBC1D16Q8TBP0 767 aa14.23□□□□□ -0.13
CKS1B-206ENST00000474215 CDCA7LQ96GN5 454 aa14.23□□□□□ -0.13
CKS1B-206ENST00000474215 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
CKS1B-206ENST00000474215 PODXL2Q9NZ53 605 aa14.23□□□□□ -0.13
CKS1B-206ENST00000474215 LMOD1P29536 600 aaPredicted RBP14.22□□□□□ -0.13
CKS1B-206ENST00000474215 TNIP1Q15025 636 aa14.22□□□□□ -0.13
CKS1B-206ENST00000474215 EAPPQ56P03 285 aaPredicted RBP14.22□□□□□ -0.13
CKS1B-206ENST00000474215 DIEXFQ68CQ4 756 aaKnown RBP14.22□□□□□ -0.13
CKS1B-206ENST00000474215 LDHDQ86WU2 507 aa14.22□□□□□ -0.13
CKS1B-206ENST00000474215 DNAJC5GQ8N7S2 189 aa14.22□□□□□ -0.13
CKS1B-206ENST00000474215 EYA3Q99504 573 aa14.22□□□□□ -0.13
CKS1B-206ENST00000474215 PLA2G12BQ9BX93 195 aa14.22□□□□□ -0.13
CKS1B-206ENST00000474215 GREM2Q9H772 168 aa14.22□□□□□ -0.13
CKS1B-206ENST00000474215 ANKIB1Q9P2G1 1089 aa14.22□□□□□ -0.13
CKS1B-206ENST00000474215 COL4A1P02462 1669 aa14.22□□□□□ -0.13
CKS1B-206ENST00000474215 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
CKS1B-206ENST00000474215 LRRC37AA6NMS7 1700 aa14.21□□□□□ -0.13
CKS1B-206ENST00000474215 SCN4AP35499 1836 aa14.21□□□□□ -0.13
CKS1B-206ENST00000474215 RIMBP2O15034 1052 aa14.21□□□□□ -0.13
CKS1B-206ENST00000474215 RAD17O75943 681 aa14.21□□□□□ -0.13
CKS1B-206ENST00000474215 CSF1RP07333 972 aa14.21□□□□□ -0.13
CKS1B-206ENST00000474215 SCNN1DP51172 638 aa14.21□□□□□ -0.13
CKS1B-206ENST00000474215 CIAPIN1Q6FI81 312 aa14.21□□□□□ -0.13
CKS1B-206ENST00000474215 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.13
CKS1B-206ENST00000474215 MRPL50Q8N5N7 158 aaKnown RBP14.21□□□□□ -0.13
CKS1B-206ENST00000474215 ZC3H12CQ9C0D7 883 aaKnown RBP14.21□□□□□ -0.13
CKS1B-206ENST00000474215 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
CKS1B-206ENST00000474215 CACNA1FO60840 1977 aa14.21□□□□□ -0.13
CKS1B-206ENST00000474215 DUOX1Q9NRD9 1551 aa14.21□□□□□ -0.14
CKS1B-206ENST00000474215 ALDH1L1O75891 902 aa14.2□□□□□ -0.14
CKS1B-206ENST00000474215 UFL1O94874 794 aa14.2□□□□□ -0.14
CKS1B-206ENST00000474215 EPS15P42566 896 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms