RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 CDK2AP1O14519 115 aa9.16□□□□□ -0.94
GPNMB-209ENST00000474157 ABL1P00519 1130 aa9.16□□□□□ -0.94
GPNMB-209ENST00000474157 DNTTIP2Q5QJE6 756 aaKnown RBP9.16□□□□□ -0.94
GPNMB-209ENST00000474157 VTI1AQ96AJ9 217 aa9.16□□□□□ -0.94
GPNMB-209ENST00000474157 TSEN34Q9BSV6 310 aaKnown RBP9.16□□□□□ -0.94
GPNMB-209ENST00000474157 IQSEC3Q9UPP2 1182 aaPredicted RBP9.16□□□□□ -0.94
GPNMB-209ENST00000474157 PTCD1O75127 700 aaKnown RBP9.15□□□□□ -0.94
GPNMB-209ENST00000474157 MFAP1P55081 439 aaKnown RBP9.15□□□□□ -0.94
GPNMB-209ENST00000474157 PSMA6P60900 246 aaKnown RBP9.15□□□□□ -0.94
GPNMB-209ENST00000474157 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
GPNMB-209ENST00000474157 NBPF15Q8N660 670 aa9.15□□□□□ -0.94
GPNMB-209ENST00000474157 SRCAPQ6ZRS2 3230 aa9.15□□□□□ -0.94
GPNMB-209ENST00000474157 DIP2CQ9Y2E4 1556 aa9.15□□□□□ -0.95
GPNMB-209ENST00000474157 SOWAHDA6NJG2 315 aa9.14□□□□□ -0.95
GPNMB-209ENST00000474157 ZNF211Q13398 564 aaPredicted RBP9.14□□□□□ -0.95
GPNMB-209ENST00000474157 NAA30Q147X3 362 aaPredicted RBP9.14□□□□□ -0.95
GPNMB-209ENST00000474157 COL26A1Q96A83 441 aa9.14□□□□□ -0.95
GPNMB-209ENST00000474157 ZSCAN10Q96SZ4 725 aaPredicted RBP9.14□□□□□ -0.95
GPNMB-209ENST00000474157 INSM2Q96T92 566 aaPredicted RBP9.14□□□□□ -0.95
GPNMB-209ENST00000474157 KDM5CP41229 1560 aa9.14□□□□□ -0.95
GPNMB-209ENST00000474157 ALKQ9UM73 1620 aa9.13□□□□□ -0.95
GPNMB-209ENST00000474157 CEP170BQ9Y4F5 1589 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-209ENST00000474157 UPP2O95045 317 aa9.13□□□□□ -0.95
GPNMB-209ENST00000474157 RALBP1Q15311 655 aa9.13□□□□□ -0.95
GPNMB-209ENST00000474157 CC2D1BQ5T0F9 858 aaKnown RBP9.13□□□□□ -0.95
GPNMB-209ENST00000474157 GGT6Q6P531 493 aa9.13□□□□□ -0.95
GPNMB-209ENST00000474157 THEMISQ8N1K5 641 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-209ENST00000474157 GTF3C2Q8WUA4 911 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-209ENST00000474157 C2orf49Q9BVC5 232 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-209ENST00000474157 ANO2Q9NQ90 1003 aa9.13□□□□□ -0.95
GPNMB-209ENST00000474157 CHMP3Q9Y3E7 222 aa9.13□□□□□ -0.95
GPNMB-209ENST00000474157 SPINT1O43278 529 aa9.12□□□□□ -0.95
GPNMB-209ENST00000474157 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
GPNMB-209ENST00000474157 C6orf118Q5T5N4 469 aa9.12□□□□□ -0.95
GPNMB-209ENST00000474157 TMEM214Q6NUQ4 689 aaKnown RBP9.12□□□□□ -0.95
GPNMB-209ENST00000474157 STAG2Q8N3U4 1231 aa9.12□□□□□ -0.95
GPNMB-209ENST00000474157 DCAF11Q8TEB1 546 aa9.12□□□□□ -0.95
GPNMB-209ENST00000474157 POLMQ9NP87 494 aaPredicted RBP9.12□□□□□ -0.95
GPNMB-209ENST00000474157 CABP1Q9NZU7 370 aa9.12□□□□□ -0.95
GPNMB-209ENST00000474157 EGFL7Q9UHF1 273 aa9.12□□□□□ -0.95
GPNMB-209ENST00000474157 DNMT3AQ9Y6K1 912 aaPredicted RBP9.12□□□□□ -0.95
GPNMB-209ENST00000474157 A2ML1A8K2U0 1454 aa9.12□□□□□ -0.95
GPNMB-209ENST00000474157 H3BRB1 525 aa9.11□□□□□ -0.95
GPNMB-209ENST00000474157 BMP2P12643 396 aa9.11□□□□□ -0.95
GPNMB-209ENST00000474157 CCDC27Q2M243 656 aa9.11□□□□□ -0.95
GPNMB-209ENST00000474157 MRPL14Q6P1L8 145 aaKnown RBP9.11□□□□□ -0.95
GPNMB-209ENST00000474157 ZNF295-AS1Q8N0V1 137 aa9.11□□□□□ -0.95
GPNMB-209ENST00000474157 ZDHHC1Q8WTX9 485 aa9.11□□□□□ -0.95
GPNMB-209ENST00000474157 TUT1Q9H6E5 874 aaKnown RBP9.11□□□□□ -0.95
GPNMB-209ENST00000474157 SERTM1A2A2V5 107 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 EML1O00423 815 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 AVPP01185 164 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 GPC1P35052 558 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 CTSOP43234 321 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-209ENST00000474157 RNF144AP50876 292 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-209ENST00000474157 MTMR3Q13615 1198 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 TEAD4Q15561 434 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 SH3PXD2AQ5TCZ1 1133 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 FOXD4L5Q5VV16 416 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-209ENST00000474157 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-209ENST00000474157 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 GRIP2Q9C0E4 1043 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 ZNF232Q9UNY5 417 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 PARP3Q9Y6F1 533 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 ARHGAP5Q13017 1502 aa9.1□□□□□ -0.95
GPNMB-209ENST00000474157 SAMD9Q5K651 1589 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 NPHP4O75161 1426 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-209ENST00000474157 FAM135BQ49AJ0 1406 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 DYNC1I1O14576 645 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 ICMTO60725 284 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 BMP1P13497 986 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 NOS2P35228 1153 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 IRX6P78412 446 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-209ENST00000474157 ZNF772Q68DY9 489 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-209ENST00000474157 GLYCTKQ8IVS8 523 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 L3MBTL2Q969R5 705 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 NIFKQ9BYG3 293 aaKnown RBP9.09□□□□□ -0.95
GPNMB-209ENST00000474157 SAP130Q9H0E3 1048 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.09□□□□□ -0.95
GPNMB-209ENST00000474157 BIN2Q9UBW5 565 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-209ENST00000474157 KCNG1Q9UIX4 513 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 LRRC7Q96NW7 1537 aa9.09□□□□□ -0.95
GPNMB-209ENST00000474157 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.09□□□□□ -0.95
GPNMB-209ENST00000474157 GFRA3O60609 400 aa9.08□□□□□ -0.96
GPNMB-209ENST00000474157 PKDCCQ504Y2 493 aa9.08□□□□□ -0.96
GPNMB-209ENST00000474157 GNASQ5JWF2 1037 aa9.08□□□□□ -0.96
GPNMB-209ENST00000474157 C16orf46Q6P387 395 aa9.08□□□□□ -0.96
GPNMB-209ENST00000474157 HELQQ8TDG4 1101 aa9.08□□□□□ -0.96
GPNMB-209ENST00000474157 NGLY1Q96IV0 654 aa9.08□□□□□ -0.96
GPNMB-209ENST00000474157 CCDC94Q9BW85 323 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-209ENST00000474157 EFCC1Q9HA90 598 aa9.08□□□□□ -0.96
GPNMB-209ENST00000474157 ABCA6Q8N139 1617 aa9.08□□□□□ -0.96
GPNMB-209ENST00000474157 VWDEQ8N2E2 1590 aa9.07□□□□□ -0.96
GPNMB-209ENST00000474157 ZNF142P52746 1687 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-209ENST00000474157 MYO3AQ8NEV4 1616 aa9.07□□□□□ -0.96
GPNMB-209ENST00000474157 ANP32CO43423 234 aa9.07□□□□□ -0.96
GPNMB-209ENST00000474157 ZSCAN20P17040 1043 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-209ENST00000474157 PLA2G4AP47712 749 aa9.07□□□□□ -0.96
GPNMB-209ENST00000474157 HIRAP54198 1017 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-209ENST00000474157 FKBP4Q02790 459 aaKnown RBP eCLIP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms