RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 BCL2L13Q9BXK5 485 aa26.62■■□□□ 1.85
APP-215ENST00000474136 PDIA6Q15084 440 aa26.61■■□□□ 1.85
APP-215ENST00000474136 HHIPL1Q96JK4 782 aa26.61■■□□□ 1.85
APP-215ENST00000474136 PLEKHF1Q96S99 279 aa26.61■■□□□ 1.85
APP-215ENST00000474136 ANXA1P04083 346 aa26.6■■□□□ 1.85
APP-215ENST00000474136 NEFMP07197 916 aa26.6■■□□□ 1.85
APP-215ENST00000474136 KIAA2012Q0VF49 1180 aa26.6■■□□□ 1.85
APP-215ENST00000474136 DDX10Q13206 875 aaKnown RBP26.6■■□□□ 1.85
APP-215ENST00000474136 NFE2L2Q16236 605 aa26.6■■□□□ 1.85
APP-215ENST00000474136 PROSER3Q2NL68 480 aa26.6■■□□□ 1.85
APP-215ENST00000474136 DLK2Q6UY11 383 aa26.6■■□□□ 1.85
APP-215ENST00000474136 SP8Q8IXZ3 490 aa26.6■■□□□ 1.85
APP-215ENST00000474136 MPNDQ8N594 471 aa26.6■■□□□ 1.85
APP-215ENST00000474136 ERBB4Q15303 1308 aa26.59■■□□□ 1.85
APP-215ENST00000474136 HCLS1P14317 486 aaPredicted RBP26.59■■□□□ 1.85
APP-215ENST00000474136 DLG5Q8TDM6 1919 aa26.58■■□□□ 1.85
APP-215ENST00000474136 CASP8AP2Q9UKL3 1982 aa26.58■■□□□ 1.85
APP-215ENST00000474136 BBOX1O75936 387 aa26.58■■□□□ 1.85
APP-215ENST00000474136 EIF2S2P20042 333 aaKnown RBP26.58■■□□□ 1.85
APP-215ENST00000474136 DGKZQ13574 1117 aa26.58■■□□□ 1.85
APP-215ENST00000474136 CDC37L1Q7L3B6 337 aa26.58■■□□□ 1.85
APP-215ENST00000474136 ZC3H15Q8WU90 426 aaKnown RBP26.58■■□□□ 1.85
APP-215ENST00000474136 YDJCA8MPS7 323 aa26.57■■□□□ 1.84
APP-215ENST00000474136 TNIP1Q15025 636 aa26.57■■□□□ 1.84
APP-215ENST00000474136 CNOT7Q9UIV1 285 aaKnown RBP26.57■■□□□ 1.84
APP-215ENST00000474136 CDHR2Q9BYE9 1310 aa26.57■■□□□ 1.84
APP-215ENST00000474136 USP48Q86UV5 1035 aa26.56■■□□□ 1.84
APP-215ENST00000474136 TSPYL4Q9UJ04 414 aa26.55■■□□□ 1.84
APP-215ENST00000474136 NLRP10Q86W26 655 aa26.54■■□□□ 1.84
APP-215ENST00000474136 MICALL2Q8IY33 904 aa26.54■■□□□ 1.84
APP-215ENST00000474136 ZNF428Q96B54 188 aa26.54■■□□□ 1.84
APP-215ENST00000474136 ZBTB12Q9Y330 459 aaPredicted RBP26.54■■□□□ 1.84
APP-215ENST00000474136 HUNKP57058 714 aa26.53■■□□□ 1.84
APP-215ENST00000474136 NOGQ13253 232 aa26.53■■□□□ 1.84
APP-215ENST00000474136 GRAPQ13588 217 aa26.53■■□□□ 1.84
APP-215ENST00000474136 DIEXFQ68CQ4 756 aaKnown RBP26.53■■□□□ 1.84
APP-215ENST00000474136 DDX46Q7L014 1031 aaKnown RBP26.53■■□□□ 1.84
APP-215ENST00000474136 GRAPLQ8TC17 118 aaPredicted RBP26.53■■□□□ 1.84
APP-215ENST00000474136 H7C1D1 291 aa26.52■■□□□ 1.84
APP-215ENST00000474136 AIMP1Q12904 312 aaKnown RBP26.52■■□□□ 1.84
APP-215ENST00000474136 SAMD7Q7Z3H4 446 aa26.51■■□□□ 1.83
APP-215ENST00000474136 NECTIN2Q92692 538 aa26.51■■□□□ 1.83
APP-215ENST00000474136 COPS6Q7L5N1 327 aa26.5■■□□□ 1.83
APP-215ENST00000474136 XAGE3Q8WTP9 111 aa26.5■■□□□ 1.83
APP-215ENST00000474136 TRMT112Q9UI30 125 aaKnown RBP26.5■■□□□ 1.83
APP-215ENST00000474136 DUOX1Q9NRD9 1551 aa26.49■■□□□ 1.83
APP-215ENST00000474136 EGFRP00533 1210 aa26.49■■□□□ 1.83
APP-215ENST00000474136 LAMB2P55268 1798 aa26.49■■□□□ 1.83
APP-215ENST00000474136 PSMD14O00487 310 aa26.48■■□□□ 1.83
APP-215ENST00000474136 TBC1D10BQ4KMP7 808 aaPredicted RBP26.48■■□□□ 1.83
APP-215ENST00000474136 SH3TC1Q8TE82 1336 aa26.47■■□□□ 1.83
APP-215ENST00000474136 MAPK8IP3Q9UPT6 1336 aa26.47■■□□□ 1.83
APP-215ENST00000474136 FAM155AB1AL88 458 aaPredicted RBP26.47■■□□□ 1.83
APP-215ENST00000474136 TCIRG1Q13488 830 aa26.47■■□□□ 1.83
APP-215ENST00000474136 HSP90AB3PQ58FF7 597 aa26.47■■□□□ 1.83
APP-215ENST00000474136 DBNDD1Q9H9R9 158 aa26.47■■□□□ 1.83
APP-215ENST00000474136 RGMBQ6NW40 437 aa26.46■■□□□ 1.83
APP-215ENST00000474136 KRT26Q7Z3Y9 468 aa26.46■■□□□ 1.83
APP-215ENST00000474136 ADM5C9JUS6 153 aa26.45■■□□□ 1.83
APP-215ENST00000474136 DPF2Q92785 391 aa26.45■■□□□ 1.83
APP-215ENST00000474136 GBA2Q9HCG7 927 aaPredicted RBP26.45■■□□□ 1.83
APP-215ENST00000474136 TAF1P21675 1872 aa26.45■■□□□ 1.82
APP-215ENST00000474136 ANKRD36CQ5JPF3 1778 aa26.45■■□□□ 1.82
APP-215ENST00000474136 RIMBP2O15034 1052 aa26.44■■□□□ 1.82
APP-215ENST00000474136 WASHC4Q2M389 1173 aa26.44■■□□□ 1.82
APP-215ENST00000474136 RBM26Q5T8P6 1007 aaKnown RBP26.44■■□□□ 1.82
APP-215ENST00000474136 KCNQ5Q9NR82 932 aa26.44■■□□□ 1.82
APP-215ENST00000474136 KIF23Q02241 960 aaPredicted RBP26.43■■□□□ 1.82
APP-215ENST00000474136 CELF1Q92879 486 aaKnown RBP26.43■■□□□ 1.82
APP-215ENST00000474136 NSFL1CQ9UNZ2 370 aaKnown RBP26.43■■□□□ 1.82
APP-215ENST00000474136 TNRC18O15417 2968 aaPredicted RBP26.43■■□□□ 1.82
APP-215ENST00000474136 RIPK4P57078 832 aa26.42■■□□□ 1.82
APP-215ENST00000474136 TMC4Q7Z404 712 aa26.42■■□□□ 1.82
APP-215ENST00000474136 SOX10P56693 466 aa26.41■■□□□ 1.82
APP-215ENST00000474136 C2orf69Q8N8R5 385 aa26.41■■□□□ 1.82
APP-215ENST00000474136 POLLQ9UGP5 575 aa26.41■■□□□ 1.82
APP-215ENST00000474136 ZNF157P51786 506 aaPredicted RBP26.4■■□□□ 1.82
APP-215ENST00000474136 GPSM2P81274 684 aa26.4■■□□□ 1.82
APP-215ENST00000474136 DOK7Q18PE1 504 aa26.4■■□□□ 1.82
APP-215ENST00000474136 KRT24Q2M2I5 525 aa26.4■■□□□ 1.82
APP-215ENST00000474136 PNNQ9H307 717 aaKnown RBP26.4■■□□□ 1.82
APP-215ENST00000474136 RTL9Q8NET4 1388 aa26.4■■□□□ 1.82
APP-215ENST00000474136 C6orf229H3BNL8 230 aa26.39■■□□□ 1.82
APP-215ENST00000474136 TRPA1O75762 1119 aa26.39■■□□□ 1.82
APP-215ENST00000474136 DCPSQ96C86 337 aaKnown RBP26.39■■□□□ 1.82
APP-215ENST00000474136 RNF186Q9NXI6 227 aa26.39■■□□□ 1.82
APP-215ENST00000474136 SAGE1Q9NXZ1 904 aa26.39■■□□□ 1.82
APP-215ENST00000474136 ECE2O60344 883 aa26.39■■□□□ 1.81
APP-215ENST00000474136 CCDC102AQ96A19 550 aa26.39■■□□□ 1.81
APP-215ENST00000474136 FAM89AQ96GI7 184 aa26.39■■□□□ 1.81
APP-215ENST00000474136 PCDH10Q9P2E7 1040 aa26.39■■□□□ 1.81
APP-215ENST00000474136 COL4A1P02462 1669 aa26.38■■□□□ 1.81
APP-215ENST00000474136 ASTN2O75129 1339 aaPredicted RBP26.38■■□□□ 1.81
APP-215ENST00000474136 LRRC37AA6NMS7 1700 aa26.38■■□□□ 1.81
APP-215ENST00000474136 BABAM1Q9NWV8 329 aa26.38■■□□□ 1.81
APP-215ENST00000474136 PDE4DIPQ5VU43 2346 aa26.37■■□□□ 1.81
APP-215ENST00000474136 RPS12P25398 132 aaKnown RBP26.37■■□□□ 1.81
APP-215ENST00000474136 SF3B3Q15393 1217 aaKnown RBP26.37■■□□□ 1.81
APP-215ENST00000474136 KIF4BQ2VIQ3 1234 aa26.36■■□□□ 1.81
APP-215ENST00000474136 RTL5Q5HYW3 569 aaPredicted RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms