RNA–Protein interactions for RNA: ENST00000473863.1

TRAIP-204, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-204ENST00000473863 NUTM1Q86Y26 1132 aa16.68■□□□□ 0.26
TRAIP-204ENST00000473863 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
TRAIP-204ENST00000473863 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
TRAIP-204ENST00000473863 C10orf71Q711Q0 1435 aa16.68■□□□□ 0.26
TRAIP-204ENST00000473863 KDM2BQ8NHM5 1336 aa16.68■□□□□ 0.26
TRAIP-204ENST00000473863 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-204ENST00000473863 ST5P78524 1137 aa16.67■□□□□ 0.26
TRAIP-204ENST00000473863 RTL5Q5HYW3 569 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-204ENST00000473863 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
TRAIP-204ENST00000473863 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-204ENST00000473863 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
TRAIP-204ENST00000473863 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
TRAIP-204ENST00000473863 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
TRAIP-204ENST00000473863 PNMA6EA0A0J9YXQ4 647 aa16.66■□□□□ 0.26
TRAIP-204ENST00000473863 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
TRAIP-204ENST00000473863 MSL1Q68DK7 614 aa16.66■□□□□ 0.26
TRAIP-204ENST00000473863 TTLL11Q8NHH1 800 aa16.66■□□□□ 0.26
TRAIP-204ENST00000473863 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
TRAIP-204ENST00000473863 SRGAP3O43295 1099 aa16.65■□□□□ 0.26
TRAIP-204ENST00000473863 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
TRAIP-204ENST00000473863 SF3B3Q15393 1217 aaKnown RBP16.65■□□□□ 0.26
TRAIP-204ENST00000473863 LMBR1LQ6UX01 489 aa16.65■□□□□ 0.26
TRAIP-204ENST00000473863 KLRG2A4D1S0 409 aaPredicted RBP16.64■□□□□ 0.25
TRAIP-204ENST00000473863 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
TRAIP-204ENST00000473863 HSPA6P17066 643 aa16.64■□□□□ 0.25
TRAIP-204ENST00000473863 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
TRAIP-204ENST00000473863 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
TRAIP-204ENST00000473863 CENPQQ7L2Z9 268 aaPredicted RBP16.64■□□□□ 0.25
TRAIP-204ENST00000473863 KIAA1551Q9HCM1 1747 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 NPHP1O15259 732 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 CAPN15O75808 1086 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 RFX5P48382 616 aaPredicted RBP16.63■□□□□ 0.25
TRAIP-204ENST00000473863 FAM161AQ3B820 660 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 SMC5Q8IY18 1101 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 GCC1Q96CN9 775 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 NLRP3Q96P20 1036 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 BRIP1Q9BX63 1249 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 A0A1B0GUL6 1792 aa16.63■□□□□ 0.25
TRAIP-204ENST00000473863 SPEF2Q9C093 1822 aa16.62■□□□□ 0.25
TRAIP-204ENST00000473863 IGHDP01880 384 aa16.62■□□□□ 0.25
TRAIP-204ENST00000473863 B4GALNT3Q6L9W6 998 aa16.62■□□□□ 0.25
TRAIP-204ENST00000473863 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
TRAIP-204ENST00000473863 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
TRAIP-204ENST00000473863 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
TRAIP-204ENST00000473863 LRRC37AA6NMS7 1700 aa16.62■□□□□ 0.25
TRAIP-204ENST00000473863 GOLGB1Q14789 3259 aaKnown RBP16.61■□□□□ 0.25
TRAIP-204ENST00000473863 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
TRAIP-204ENST00000473863 GPR162Q16538 588 aa16.61■□□□□ 0.25
TRAIP-204ENST00000473863 C3orf67Q6ZVT6 689 aa16.61■□□□□ 0.25
TRAIP-204ENST00000473863 GREM2Q9H772 168 aa16.61■□□□□ 0.25
TRAIP-204ENST00000473863 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
TRAIP-204ENST00000473863 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
TRAIP-204ENST00000473863 COL4A1P02462 1669 aa16.6■□□□□ 0.25
TRAIP-204ENST00000473863 SLC34A2O95436 690 aa16.6■□□□□ 0.25
TRAIP-204ENST00000473863 ITGA6P23229 1130 aa16.6■□□□□ 0.25
TRAIP-204ENST00000473863 POLD1P28340 1107 aa16.6■□□□□ 0.25
TRAIP-204ENST00000473863 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
TRAIP-204ENST00000473863 CCDC57Q2TAC2 916 aa16.6■□□□□ 0.25
TRAIP-204ENST00000473863 ANKRD18BA2A2Z9 1011 aa16.59■□□□□ 0.25
TRAIP-204ENST00000473863 PDE6BP35913 854 aa16.59■□□□□ 0.25
TRAIP-204ENST00000473863 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
TRAIP-204ENST00000473863 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
TRAIP-204ENST00000473863 CIAO1O76071 339 aa16.58■□□□□ 0.24
TRAIP-204ENST00000473863 HOXA10P31260 410 aaPredicted RBP16.58■□□□□ 0.24
TRAIP-204ENST00000473863 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
TRAIP-204ENST00000473863 TAF1P21675 1872 aa16.58■□□□□ 0.24
TRAIP-204ENST00000473863 BRCA1P38398 1863 aaKnown RBP16.57■□□□□ 0.24
TRAIP-204ENST00000473863 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
TRAIP-204ENST00000473863 ERC1Q8IUD2 1116 aa16.57■□□□□ 0.24
TRAIP-204ENST00000473863 CCDC24Q8N4L8 307 aa16.57■□□□□ 0.24
TRAIP-204ENST00000473863 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
TRAIP-204ENST00000473863 PA2G4Q9UQ80 394 aaKnown RBP16.56■□□□□ 0.24
TRAIP-204ENST00000473863 EYA2O00167 538 aa16.55■□□□□ 0.24
TRAIP-204ENST00000473863 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
TRAIP-204ENST00000473863 SRGNP10124 158 aa16.55■□□□□ 0.24
TRAIP-204ENST00000473863 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
TRAIP-204ENST00000473863 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
TRAIP-204ENST00000473863 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
TRAIP-204ENST00000473863 CCDC85AQ96PX6 553 aaPredicted RBP16.55■□□□□ 0.24
TRAIP-204ENST00000473863 CRAMP1Q96RY5 1269 aa16.55■□□□□ 0.24
TRAIP-204ENST00000473863 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
TRAIP-204ENST00000473863 EXOC6BQ9Y2D4 811 aa16.55■□□□□ 0.24
TRAIP-204ENST00000473863 LTBP1Q14766 1721 aa16.55■□□□□ 0.24
TRAIP-204ENST00000473863 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
TRAIP-204ENST00000473863 NPR1P16066 1061 aa16.54■□□□□ 0.24
TRAIP-204ENST00000473863 IGHMBP2P38935 993 aaKnown RBP16.54■□□□□ 0.24
TRAIP-204ENST00000473863 IL15P40933 162 aaPredicted RBP16.54■□□□□ 0.24
TRAIP-204ENST00000473863 NUCB1Q02818 461 aa16.54■□□□□ 0.24
TRAIP-204ENST00000473863 GRAPQ13588 217 aa16.54■□□□□ 0.24
TRAIP-204ENST00000473863 COL13A1Q5TAT6 717 aaPredicted RBP16.54■□□□□ 0.24
TRAIP-204ENST00000473863 ATG9AQ7Z3C6 839 aa16.54■□□□□ 0.24
TRAIP-204ENST00000473863 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
TRAIP-204ENST00000473863 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
TRAIP-204ENST00000473863 KIF1BPQ96EK5 621 aa16.54■□□□□ 0.24
TRAIP-204ENST00000473863 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
TRAIP-204ENST00000473863 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRAIP-204ENST00000473863 STYK1Q6J9G0 422 aa16.53■□□□□ 0.24
TRAIP-204ENST00000473863 TMC4Q7Z404 712 aa16.53■□□□□ 0.24
TRAIP-204ENST00000473863 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms