RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TGFB1P01137 390 aa5.47□□□□□ -1.53
CCDC39-203ENST00000473854 SPINK2P20155 84 aa5.47□□□□□ -1.53
CCDC39-203ENST00000473854 UVSSAQ2YD98 709 aa5.47□□□□□ -1.53
CCDC39-203ENST00000473854 DHX32Q7L7V1 743 aaKnown RBP5.47□□□□□ -1.53
CCDC39-203ENST00000473854 CACTIN-AS1Q8N1I8 211 aa5.47□□□□□ -1.53
CCDC39-203ENST00000473854 CEP41Q9BYV8 373 aa5.47□□□□□ -1.53
CCDC39-203ENST00000473854 USP17L5A8MUK1 530 aa5.46□□□□□ -1.54
CCDC39-203ENST00000473854 GLB1P16278 677 aa5.46□□□□□ -1.54
CCDC39-203ENST00000473854 RTN1Q16799 776 aa5.46□□□□□ -1.54
CCDC39-203ENST00000473854 CCDC102BQ68D86 513 aa5.46□□□□□ -1.54
CCDC39-203ENST00000473854 WWC1Q8IX03 1113 aa5.46□□□□□ -1.54
CCDC39-203ENST00000473854 MUC3BQ9H195 1237 aa5.46□□□□□ -1.54
CCDC39-203ENST00000473854 GDPD2Q9HCC8 539 aa5.46□□□□□ -1.54
CCDC39-203ENST00000473854 MED26O95402 600 aa5.45□□□□□ -1.54
CCDC39-203ENST00000473854 NRLP54845 237 aa5.45□□□□□ -1.54
CCDC39-203ENST00000473854 DTX1Q86Y01 620 aa5.45□□□□□ -1.54
CCDC39-203ENST00000473854 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
CCDC39-203ENST00000473854 SMG9Q9H0W8 520 aaKnown RBP5.45□□□□□ -1.54
CCDC39-203ENST00000473854 RBSNQ9H1K0 784 aa5.45□□□□□ -1.54
CCDC39-203ENST00000473854 PALM3A6NDB9 673 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-203ENST00000473854 ALX3O95076 343 aa5.44□□□□□ -1.54
CCDC39-203ENST00000473854 RARAP10276 462 aa5.44□□□□□ -1.54
CCDC39-203ENST00000473854 EIF2AK2P19525 551 aaKnown RBP5.44□□□□□ -1.54
CCDC39-203ENST00000473854 JAG1P78504 1218 aa5.44□□□□□ -1.54
CCDC39-203ENST00000473854 NFIAQ12857 509 aa5.44□□□□□ -1.54
CCDC39-203ENST00000473854 ZDHHC13Q8IUH4 622 aa5.44□□□□□ -1.54
CCDC39-203ENST00000473854 LARGE2Q8N3Y3 721 aa5.44□□□□□ -1.54
CCDC39-203ENST00000473854 DBNDD2Q9BQY9 259 aa5.44□□□□□ -1.54
CCDC39-203ENST00000473854 PLEKHM2Q8IWE5 1019 aa5.43□□□□□ -1.54
CCDC39-203ENST00000473854 C2orf49Q9BVC5 232 aaPredicted RBP5.43□□□□□ -1.54
CCDC39-203ENST00000473854 GHRHP01286 108 aa5.42□□□□□ -1.54
CCDC39-203ENST00000473854 ARSDP51689 593 aa5.42□□□□□ -1.54
CCDC39-203ENST00000473854 RNF43Q68DV7 783 aa5.42□□□□□ -1.54
CCDC39-203ENST00000473854 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.42□□□□□ -1.54
CCDC39-203ENST00000473854 ADGRE2Q9UHX3 823 aa5.42□□□□□ -1.54
CCDC39-203ENST00000473854 ATAD2Q6PL18 1390 aa5.42□□□□□ -1.54
CCDC39-203ENST00000473854 ZBTB42B2RXF5 422 aa5.41□□□□□ -1.54
CCDC39-203ENST00000473854 ZBTB7BO15156 539 aaPredicted RBP5.41□□□□□ -1.54
CCDC39-203ENST00000473854 SIX5Q8N196 739 aa5.41□□□□□ -1.54
CCDC39-203ENST00000473854 DEPDC4Q8N2C3 294 aa5.41□□□□□ -1.54
CCDC39-203ENST00000473854 UTP4Q969X6 686 aaKnown RBP5.41□□□□□ -1.54
CCDC39-203ENST00000473854 PLD4Q96BZ4 506 aa5.41□□□□□ -1.54
CCDC39-203ENST00000473854 NGLY1Q96IV0 654 aa5.41□□□□□ -1.54
CCDC39-203ENST00000473854 ALG2Q9H553 416 aa5.41□□□□□ -1.54
CCDC39-203ENST00000473854 DMGDHQ9UI17 866 aaKnown RBP5.41□□□□□ -1.54
CCDC39-203ENST00000473854 INPP5BP32019 993 aa5.4□□□□□ -1.54
CCDC39-203ENST00000473854 IDH3AP50213 366 aa5.4□□□□□ -1.54
CCDC39-203ENST00000473854 MLLT1Q03111 559 aaPredicted RBP5.4□□□□□ -1.54
CCDC39-203ENST00000473854 PLAURQ03405 335 aa5.4□□□□□ -1.54
CCDC39-203ENST00000473854 SETDB1Q15047 1291 aa5.4□□□□□ -1.54
CCDC39-203ENST00000473854 KRT25Q7Z3Z0 450 aa5.4□□□□□ -1.54
CCDC39-203ENST00000473854 IL22RA1Q8N6P7 574 aa5.4□□□□□ -1.54
CCDC39-203ENST00000473854 ASIC4Q96FT7 647 aa5.4□□□□□ -1.54
CCDC39-203ENST00000473854 TLR7Q9NYK1 1049 aaKnown RBP5.4□□□□□ -1.54
CCDC39-203ENST00000473854 ZFATQ9P243 1243 aa5.4□□□□□ -1.54
CCDC39-203ENST00000473854 C21orf2O43822 256 aa5.39□□□□□ -1.55
CCDC39-203ENST00000473854 PSAPP07602 524 aa5.39□□□□□ -1.55
CCDC39-203ENST00000473854 CLDN10P78369 228 aa5.39□□□□□ -1.55
CCDC39-203ENST00000473854 GDF6Q6KF10 455 aaPredicted RBP5.39□□□□□ -1.55
CCDC39-203ENST00000473854 OGFOD1Q8N543 542 aa5.39□□□□□ -1.55
CCDC39-203ENST00000473854 POU5F2Q8N7G0 328 aa5.39□□□□□ -1.55
CCDC39-203ENST00000473854 TSEN2Q8NCE0 465 aaKnown RBP5.39□□□□□ -1.55
CCDC39-203ENST00000473854 GIMAP7Q8NHV1 300 aa5.39□□□□□ -1.55
CCDC39-203ENST00000473854 SCG3Q8WXD2 468 aaKnown RBP5.39□□□□□ -1.55
CCDC39-203ENST00000473854 IFT43Q96FT9 208 aa5.39□□□□□ -1.55
CCDC39-203ENST00000473854 C7orf69Q9H7B7 122 aa5.39□□□□□ -1.55
CCDC39-203ENST00000473854 ANGEL1Q9UNK9 670 aaKnown RBP5.39□□□□□ -1.55
CCDC39-203ENST00000473854 KIAA1024Q9UPX6 916 aa5.39□□□□□ -1.55
CCDC39-203ENST00000473854 LOC102724428A0A0B4J2F2 783 aa5.38□□□□□ -1.55
CCDC39-203ENST00000473854 USP17L3A6NCW0 530 aa5.38□□□□□ -1.55
CCDC39-203ENST00000473854 USP17L4A6NCW7 530 aa5.38□□□□□ -1.55
CCDC39-203ENST00000473854 TARSP26639 723 aaKnown RBP5.38□□□□□ -1.55
CCDC39-203ENST00000473854 SIK1P57059 783 aa5.38□□□□□ -1.55
CCDC39-203ENST00000473854 OGFOD2Q6N063 350 aa5.38□□□□□ -1.55
CCDC39-203ENST00000473854 USP17L2Q6R6M4 530 aa5.38□□□□□ -1.55
CCDC39-203ENST00000473854 USP17L1Q7RTZ2 530 aa5.38□□□□□ -1.55
CCDC39-203ENST00000473854 CLEC10AQ8IUN9 316 aa5.38□□□□□ -1.55
CCDC39-203ENST00000473854 AGGF1Q8N302 714 aaeCLIP5.38□□□□□ -1.55
CCDC39-203ENST00000473854 CHMP7Q8WUX9 453 aaPredicted RBP5.38□□□□□ -1.55
CCDC39-203ENST00000473854 UBL7Q96S82 380 aaPredicted RBP5.38□□□□□ -1.55
CCDC39-203ENST00000473854 PPME1Q9Y570 386 aa5.38□□□□□ -1.55
CCDC39-203ENST00000473854 PRR19A6NJB7 356 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 ADAMTS4O75173 837 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 SASH3O75995 380 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 EGFRP00533 1210 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 HOXD8P13378 290 aaPredicted RBP5.37□□□□□ -1.55
CCDC39-203ENST00000473854 SOX18P35713 384 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 HFE2Q6ZVN8 426 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 ACAD11Q709F0 780 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 TRIM42Q8IWZ5 723 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 ARMC10Q8N2F6 343 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 FAM46AQ96IP4 442 aaKnown RBP5.37□□□□□ -1.55
CCDC39-203ENST00000473854 MYRFLQ96LU7 910 aa5.37□□□□□ -1.55
CCDC39-203ENST00000473854 C8AP07357 584 aa5.36□□□□□ -1.55
CCDC39-203ENST00000473854 JUNBP17275 347 aaPredicted RBP5.36□□□□□ -1.55
CCDC39-203ENST00000473854 SEC13P55735 322 aa5.36□□□□□ -1.55
CCDC39-203ENST00000473854 CPSF6Q16630 551 aaKnown RBP eCLIP5.36□□□□□ -1.55
CCDC39-203ENST00000473854 FAM83CQ9BQN1 747 aa5.36□□□□□ -1.55
CCDC39-203ENST00000473854 BCS1LQ9Y276 419 aa5.36□□□□□ -1.55
CCDC39-203ENST00000473854 HIF3AQ9Y2N7 669 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms