RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 SMTNL1A8MU46 457 aa16.82■□□□□ 0.28
NHLRC3-204ENST00000473371 CLIP2Q9UDT6 1046 aa16.82■□□□□ 0.28
NHLRC3-204ENST00000473371 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
NHLRC3-204ENST00000473371 MED1Q15648 1581 aaPredicted RBP16.82■□□□□ 0.28
NHLRC3-204ENST00000473371 IP6K1Q92551 441 aa16.82■□□□□ 0.28
NHLRC3-204ENST00000473371 PGBD1Q96JS3 809 aa16.82■□□□□ 0.28
NHLRC3-204ENST00000473371 BICC1Q9H694 974 aaKnown RBP16.82■□□□□ 0.28
NHLRC3-204ENST00000473371 ARHGAP23Q9P227 1491 aa16.82■□□□□ 0.28
NHLRC3-204ENST00000473371 ADGRL3Q9HAR2 1447 aa16.82■□□□□ 0.28
NHLRC3-204ENST00000473371 GRM8O00222 908 aa16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 AKAP4Q5JQC9 854 aa16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 MARF1Q9Y4F3 1742 aaKnown RBP16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 H3BQV1 296 aa16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 JAK2O60674 1132 aa16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 NCBP1Q09161 790 aaKnown RBP16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 ZNF589Q86UQ0 364 aaPredicted RBP16.81■□□□□ 0.28
NHLRC3-204ENST00000473371 BRF1Q92994 677 aa16.8■□□□□ 0.28
NHLRC3-204ENST00000473371 MED23Q9ULK4 1368 aa16.8■□□□□ 0.28
NHLRC3-204ENST00000473371 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
NHLRC3-204ENST00000473371 LINS1Q8NG48 757 aa16.8■□□□□ 0.28
NHLRC3-204ENST00000473371 GOLGA6L19H0YKK7 550 aa16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 HSP90B1P14625 803 aaKnown RBP16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 CACTINQ8WUQ7 758 aaKnown RBP16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 ANKARQ7Z5J8 1434 aa16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 CEBPAP49715 358 aaPredicted RBP16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 GIGYF1O75420 1035 aaPredicted RBP16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 RESTQ13127 1097 aa16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 KRT32Q14532 448 aa16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 CCDC112Q8NEF3 446 aa16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 GTF3C6Q969F1 213 aa16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 DDX11Q96FC9 970 aa16.79■□□□□ 0.28
NHLRC3-204ENST00000473371 PAXBP1Q9Y5B6 917 aa16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 TAF5LO75529 589 aa16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 CAVIN2O95810 425 aa16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 SYCP1Q15431 976 aa16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 CCDC144BQ3MJ40 725 aa16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 TSGA10IPQ3SY00 556 aa16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 C1orf141Q5JVX7 400 aa16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 CCDC144CPQ8IYA2 1237 aa16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 FEZ1Q99689 392 aa16.78■□□□□ 0.28
NHLRC3-204ENST00000473371 PRAMEF22A3QJZ6 481 aa16.77■□□□□ 0.28
NHLRC3-204ENST00000473371 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
NHLRC3-204ENST00000473371 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.28
NHLRC3-204ENST00000473371 LRRC59Q96AG4 307 aaKnown RBP16.77■□□□□ 0.28
NHLRC3-204ENST00000473371 EDC3Q96F86 508 aaKnown RBP16.77■□□□□ 0.28
NHLRC3-204ENST00000473371 NEK1Q96PY6 1258 aa16.77■□□□□ 0.28
NHLRC3-204ENST00000473371 CFAP45Q9UL16 551 aa16.77■□□□□ 0.28
NHLRC3-204ENST00000473371 CEBPZQ03701 1054 aaKnown RBP16.77■□□□□ 0.28
NHLRC3-204ENST00000473371 ZNF592Q92610 1267 aa16.77■□□□□ 0.28
NHLRC3-204ENST00000473371 CDC25BP30305 580 aa16.77■□□□□ 0.27
NHLRC3-204ENST00000473371 LTN1O94822 1766 aa16.77■□□□□ 0.27
NHLRC3-204ENST00000473371 Q6ZUG5 572 aa16.76■□□□□ 0.27
NHLRC3-204ENST00000473371 ZSCAN16Q9H4T2 348 aaPredicted RBP16.76■□□□□ 0.27
NHLRC3-204ENST00000473371 OGFRQ9NZT2 677 aa16.75■□□□□ 0.27
NHLRC3-204ENST00000473371 UTYO14607 1347 aa16.75■□□□□ 0.27
NHLRC3-204ENST00000473371 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.75■□□□□ 0.27
NHLRC3-204ENST00000473371 FGD1P98174 961 aa16.75■□□□□ 0.27
NHLRC3-204ENST00000473371 CEP135Q66GS9 1140 aa16.75■□□□□ 0.27
NHLRC3-204ENST00000473371 JCADQ9P266 1359 aa16.75■□□□□ 0.27
NHLRC3-204ENST00000473371 IQCB1Q15051 598 aa16.75■□□□□ 0.27
NHLRC3-204ENST00000473371 RIC3Q7Z5B4 369 aa16.75■□□□□ 0.27
NHLRC3-204ENST00000473371 CGNQ9P2M7 1197 aaKnown RBP16.75■□□□□ 0.27
NHLRC3-204ENST00000473371 USP54Q70EL1 1684 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 FOSBP53539 338 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 NAA30Q147X3 362 aaPredicted RBP16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 AMOTQ4VCS5 1084 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 C11orf57Q6ZUT1 292 aaPredicted RBP16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 KIF20AO95235 890 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 KCNA6P17658 529 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 STX1AQ16623 288 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 LRRC8AQ8IWT6 810 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 CCAR1Q8IX12 1150 aaKnown RBP16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 BECN2A8MW95 431 aa16.74■□□□□ 0.27
NHLRC3-204ENST00000473371 LMO7Q8WWI1 1683 aa16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 CTAGE5O15320 804 aa16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 SARM1Q6SZW1 724 aa16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 LRRC2Q9BYS8 371 aa16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 BCL11BQ9C0K0 894 aaPredicted RBP16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 CTNNA3Q9UI47 895 aa16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 NEMFO60524 1076 aa16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 ARID5BQ14865 1188 aa16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 MRFAP1L1Q96HT8 127 aa16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
NHLRC3-204ENST00000473371 IGSF3O75054 1194 aa16.72■□□□□ 0.27
NHLRC3-204ENST00000473371 IGKV5-2P06315 115 aa16.72■□□□□ 0.27
NHLRC3-204ENST00000473371 NEXNQ0ZGT2 675 aa16.72■□□□□ 0.27
NHLRC3-204ENST00000473371 CCDC73Q6ZRK6 1079 aa16.72■□□□□ 0.27
NHLRC3-204ENST00000473371 SCRN1Q12765 414 aa16.72■□□□□ 0.27
NHLRC3-204ENST00000473371 NDUFB9Q9Y6M9 179 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms