RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ARAFP10398 606 aa10.16□□□□□ -0.78
CLK1-209ENST00000472679 TMC7Q7Z402 723 aa10.16□□□□□ -0.78
CLK1-209ENST00000472679 GGA1Q9UJY5 639 aa10.16□□□□□ -0.78
CLK1-209ENST00000472679 GPR182O15218 404 aa10.15□□□□□ -0.78
CLK1-209ENST00000472679 MMP20O60882 483 aa10.15□□□□□ -0.78
CLK1-209ENST00000472679 TMCO4Q5TGY1 634 aa10.15□□□□□ -0.78
CLK1-209ENST00000472679 PDE12Q6L8Q7 609 aaKnown RBP10.15□□□□□ -0.78
CLK1-209ENST00000472679 XKR5Q6UX68 686 aa10.15□□□□□ -0.78
CLK1-209ENST00000472679 ZNF438Q7Z4V0 828 aa10.15□□□□□ -0.78
CLK1-209ENST00000472679 FCHSD1Q86WN1 690 aa10.15□□□□□ -0.78
CLK1-209ENST00000472679 TTC16Q8NEE8 873 aa10.15□□□□□ -0.78
CLK1-209ENST00000472679 TMC1Q8TDI8 760 aa10.15□□□□□ -0.78
CLK1-209ENST00000472679 CITED4Q96RK1 184 aa10.15□□□□□ -0.78
CLK1-209ENST00000472679 OXCT2Q9BYC2 517 aaPredicted RBP10.15□□□□□ -0.78
CLK1-209ENST00000472679 CCDC27Q2M243 656 aa10.14□□□□□ -0.79
CLK1-209ENST00000472679 C1orf229Q6ZS94 237 aaPredicted RBP10.14□□□□□ -0.79
CLK1-209ENST00000472679 WHAMMQ8TF30 809 aa10.14□□□□□ -0.79
CLK1-209ENST00000472679 AVENQ9NQS1 362 aaPredicted RBP10.14□□□□□ -0.79
CLK1-209ENST00000472679 CNTN3Q9P232 1028 aa10.14□□□□□ -0.79
CLK1-209ENST00000472679 SIN3BO75182 1162 aa10.13□□□□□ -0.79
CLK1-209ENST00000472679 MAP3K6O95382 1288 aa10.13□□□□□ -0.79
CLK1-209ENST00000472679 ADH6P28332 368 aa10.13□□□□□ -0.79
CLK1-209ENST00000472679 NEUROD1Q13562 356 aa10.13□□□□□ -0.79
CLK1-209ENST00000472679 IGFLR1Q9H665 355 aa10.13□□□□□ -0.79
CLK1-209ENST00000472679 EFCC1Q9HA90 598 aa10.13□□□□□ -0.79
CLK1-209ENST00000472679 FOXD3Q9UJU5 478 aaPredicted RBP10.13□□□□□ -0.79
CLK1-209ENST00000472679 WIPF1O43516 503 aa10.12□□□□□ -0.79
CLK1-209ENST00000472679 TNFRSF21O75509 655 aa10.12□□□□□ -0.79
CLK1-209ENST00000472679 EHHADHQ08426 723 aa10.12□□□□□ -0.79
CLK1-209ENST00000472679 LYPD4Q6UWN0 246 aa10.12□□□□□ -0.79
CLK1-209ENST00000472679 DNAJC14Q6Y2X3 702 aaPredicted RBP10.12□□□□□ -0.79
CLK1-209ENST00000472679 DHX32Q7L7V1 743 aaKnown RBP10.12□□□□□ -0.79
CLK1-209ENST00000472679 ASB16Q96NS5 453 aa10.12□□□□□ -0.79
CLK1-209ENST00000472679 NIF3L1Q9GZT8 377 aa10.12□□□□□ -0.79
CLK1-209ENST00000472679 ABI2Q9NYB9 513 aaPredicted RBP10.12□□□□□ -0.79
CLK1-209ENST00000472679 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.12□□□□□ -0.79
CLK1-209ENST00000472679 CYP2E1P05181 493 aaPredicted RBP10.11□□□□□ -0.79
CLK1-209ENST00000472679 TBC1D8BQ0IIM8 1120 aa10.11□□□□□ -0.79
CLK1-209ENST00000472679 PDE3BQ13370 1112 aa10.11□□□□□ -0.79
CLK1-209ENST00000472679 C1orf127Q8N9H9 656 aa10.11□□□□□ -0.79
CLK1-209ENST00000472679 MDFIQ99750 246 aa10.11□□□□□ -0.79
CLK1-209ENST00000472679 TLR7Q9NYK1 1049 aaKnown RBP10.11□□□□□ -0.79
CLK1-209ENST00000472679 ZBTB42B2RXF5 422 aa10.1□□□□□ -0.79
CLK1-209ENST00000472679 LORP23490 312 aaPredicted RBP10.1□□□□□ -0.79
CLK1-209ENST00000472679 TTC39BQ5VTQ0 682 aaPredicted RBP10.1□□□□□ -0.79
CLK1-209ENST00000472679 SLCO4C1Q6ZQN7 724 aa10.1□□□□□ -0.79
CLK1-209ENST00000472679 GOLGA6L1Q8N7Z2 621 aa10.1□□□□□ -0.79
CLK1-209ENST00000472679 OR13H1Q8NG92 308 aa10.1□□□□□ -0.79
CLK1-209ENST00000472679 DMRTB1Q96MA1 342 aa10.1□□□□□ -0.79
CLK1-209ENST00000472679 CHRDQ9H2X0 955 aa10.1□□□□□ -0.79
CLK1-209ENST00000472679 DNAJB12Q9NXW2 375 aaKnown RBP10.1□□□□□ -0.79
CLK1-209ENST00000472679 GDF2Q9UK05 429 aaPredicted RBP10.1□□□□□ -0.79
CLK1-209ENST00000472679 CELA2BP08218 269 aaPredicted RBP10.09□□□□□ -0.79
CLK1-209ENST00000472679 MFAP1P55081 439 aaKnown RBP10.09□□□□□ -0.79
CLK1-209ENST00000472679 MLLT1Q03111 559 aaPredicted RBP10.09□□□□□ -0.79
CLK1-209ENST00000472679 ORC1Q13415 861 aa10.09□□□□□ -0.79
CLK1-209ENST00000472679 DSC3Q14574 896 aa10.09□□□□□ -0.79
CLK1-209ENST00000472679 COL13A1Q5TAT6 717 aaPredicted RBP10.09□□□□□ -0.79
CLK1-209ENST00000472679 ZSCAN29Q8IWY8 852 aaPredicted RBP10.09□□□□□ -0.79
CLK1-209ENST00000472679 TNFRSF25Q93038 417 aa10.09□□□□□ -0.79
CLK1-209ENST00000472679 UBE2OQ9C0C9 1292 aaKnown RBP10.09□□□□□ -0.79
CLK1-209ENST00000472679 ANKRD33BA6NCL7 494 aa10.08□□□□□ -0.8
CLK1-209ENST00000472679 TREHO43280 583 aa10.08□□□□□ -0.8
CLK1-209ENST00000472679 EPXP11678 715 aa10.08□□□□□ -0.8
CLK1-209ENST00000472679 ZNF385CQ66K41 422 aaPredicted RBP10.08□□□□□ -0.8
CLK1-209ENST00000472679 ADARB2-AS1A8MUL3 147 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 SHISA8B8ZZ34 492 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 OIP5O43482 229 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 PHACTR2O75167 634 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 PSAPP07602 524 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 BCRP11274 1271 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 ADH7P40394 386 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 GALNT6Q8NCL4 622 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 TRPM4Q8TD43 1214 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 SNX29Q8TEQ0 813 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 ALKBH8Q96BT7 664 aaKnown RBP10.07□□□□□ -0.8
CLK1-209ENST00000472679 NSUN5Q96P11 429 aaKnown RBP10.07□□□□□ -0.8
CLK1-209ENST00000472679 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
CLK1-209ENST00000472679 ELOA3CA0A087WX78 387 aaPredicted RBP10.06□□□□□ -0.8
CLK1-209ENST00000472679 ELOA3DA6NLF2 546 aaPredicted RBP10.06□□□□□ -0.8
CLK1-209ENST00000472679 EREGO14944 169 aa10.06□□□□□ -0.8
CLK1-209ENST00000472679 PLAURQ03405 335 aa10.06□□□□□ -0.8
CLK1-209ENST00000472679 ELOA3BQ3SY89 546 aa10.06□□□□□ -0.8
CLK1-209ENST00000472679 USPL1Q5W0Q7 1092 aa10.06□□□□□ -0.8
CLK1-209ENST00000472679 HFE2Q6ZVN8 426 aa10.06□□□□□ -0.8
CLK1-209ENST00000472679 ELOA3Q8NG57 546 aa10.06□□□□□ -0.8
CLK1-209ENST00000472679 EDARADDQ8WWZ3 215 aa10.06□□□□□ -0.8
CLK1-209ENST00000472679 ZFYVE28Q9HCC9 887 aa10.06□□□□□ -0.8
CLK1-209ENST00000472679 SLC6A14Q9UN76 642 aa10.06□□□□□ -0.8
CLK1-209ENST00000472679 J3QW42 95 aa10.05□□□□□ -0.8
CLK1-209ENST00000472679 HOXD8P13378 290 aaPredicted RBP10.05□□□□□ -0.8
CLK1-209ENST00000472679 CES1P23141 567 aa10.05□□□□□ -0.8
CLK1-209ENST00000472679 SOX18P35713 384 aa10.05□□□□□ -0.8
CLK1-209ENST00000472679 NRLP54845 237 aa10.05□□□□□ -0.8
CLK1-209ENST00000472679 GPLD1P80108 840 aa10.05□□□□□ -0.8
CLK1-209ENST00000472679 PLCB3Q01970 1234 aa10.05□□□□□ -0.8
CLK1-209ENST00000472679 PODXL2Q9NZ53 605 aa10.05□□□□□ -0.8
CLK1-209ENST00000472679 NAGPAQ9UK23 515 aa10.05□□□□□ -0.8
CLK1-209ENST00000472679 POLR3DP05423 398 aaPredicted RBP10.04□□□□□ -0.8
CLK1-209ENST00000472679 NPAS4Q8IUM7 802 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms