RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RPGRQ92834 1020 aaKnown RBP12.41□□□□□ -0.42
VCL-204ENST00000472585 PLEKHF1Q96S99 279 aa12.41□□□□□ -0.42
VCL-204ENST00000472585 TMX4Q9H1E5 349 aaPredicted RBP12.41□□□□□ -0.42
VCL-204ENST00000472585 ZBTB3Q9H5J0 574 aa12.41□□□□□ -0.42
VCL-204ENST00000472585 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
VCL-204ENST00000472585 NOGQ13253 232 aa12.4□□□□□ -0.42
VCL-204ENST00000472585 PDIA6Q15084 440 aa12.4□□□□□ -0.42
VCL-204ENST00000472585 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
VCL-204ENST00000472585 CRAMP1Q96RY5 1269 aa12.4□□□□□ -0.42
VCL-204ENST00000472585 GLIS2Q9BZE0 524 aaPredicted RBP12.39□□□□□ -0.43
VCL-204ENST00000472585 NYXQ9GZU5 481 aa12.39□□□□□ -0.43
VCL-204ENST00000472585 GPRC5DQ9NZD1 345 aa12.39□□□□□ -0.43
VCL-204ENST00000472585 AKAP11Q9UKA4 1901 aa12.39□□□□□ -0.43
VCL-204ENST00000472585 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
VCL-204ENST00000472585 PPIP5K2O43314 1243 aa12.38□□□□□ -0.43
VCL-204ENST00000472585 HIRAP54198 1017 aaPredicted RBP12.38□□□□□ -0.43
VCL-204ENST00000472585 CXCL9Q07325 125 aa12.38□□□□□ -0.43
VCL-204ENST00000472585 AOC3Q16853 763 aa12.38□□□□□ -0.43
VCL-204ENST00000472585 PROSER3Q2NL68 480 aa12.38□□□□□ -0.43
VCL-204ENST00000472585 DLK2Q6UY11 383 aa12.38□□□□□ -0.43
VCL-204ENST00000472585 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
VCL-204ENST00000472585 SHTN1A0MZ66 631 aa12.37□□□□□ -0.43
VCL-204ENST00000472585 ANXA1P04083 346 aa12.37□□□□□ -0.43
VCL-204ENST00000472585 SLC10A5Q5PT55 438 aa12.37□□□□□ -0.43
VCL-204ENST00000472585 GIGYF2Q6Y7W6 1299 aaKnown RBP12.37□□□□□ -0.43
VCL-204ENST00000472585 CDC37L1Q7L3B6 337 aa12.37□□□□□ -0.43
VCL-204ENST00000472585 RBM17Q96I25 401 aaKnown RBP12.37□□□□□ -0.43
VCL-204ENST00000472585 BCL2L13Q9BXK5 485 aa12.37□□□□□ -0.43
VCL-204ENST00000472585 ATP6V0A2Q9Y487 856 aa12.37□□□□□ -0.43
VCL-204ENST00000472585 HUNKP57058 714 aa12.36□□□□□ -0.43
VCL-204ENST00000472585 ZC3H15Q8WU90 426 aaKnown RBP12.36□□□□□ -0.43
VCL-204ENST00000472585 ZIC5Q96T25 663 aa12.36□□□□□ -0.43
VCL-204ENST00000472585 RTFDC1Q9BY42 306 aaPredicted RBP12.36□□□□□ -0.43
VCL-204ENST00000472585 PGAP2Q9UHJ9 254 aa12.36□□□□□ -0.43
VCL-204ENST00000472585 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
VCL-204ENST00000472585 GMPSP49915 693 aaPredicted RBP12.35□□□□□ -0.43
VCL-204ENST00000472585 NFE2L2Q16236 605 aa12.35□□□□□ -0.43
VCL-204ENST00000472585 KIF6Q6ZMV9 814 aa12.35□□□□□ -0.43
VCL-204ENST00000472585 PNISRQ8TF01 805 aaKnown RBP12.35□□□□□ -0.43
VCL-204ENST00000472585 ZNF428Q96B54 188 aa12.35□□□□□ -0.43
VCL-204ENST00000472585 VPS33BQ9H267 617 aa12.35□□□□□ -0.43
VCL-204ENST00000472585 SAGE1Q9NXZ1 904 aa12.35□□□□□ -0.43
VCL-204ENST00000472585 ABCC4O15439 1325 aa12.35□□□□□ -0.43
VCL-204ENST00000472585 NUP98P52948 1817 aa12.34□□□□□ -0.43
VCL-204ENST00000472585 YDJCA8MPS7 323 aa12.34□□□□□ -0.43
VCL-204ENST00000472585 HCLS1P14317 486 aaPredicted RBP12.34□□□□□ -0.43
VCL-204ENST00000472585 TNIP1Q15025 636 aa12.34□□□□□ -0.43
VCL-204ENST00000472585 SUPT20HQ8NEM7 779 aa12.34□□□□□ -0.43
VCL-204ENST00000472585 TRPM4Q8TD43 1214 aa12.34□□□□□ -0.43
VCL-204ENST00000472585 ZNRF3Q9ULT6 936 aa12.34□□□□□ -0.43
VCL-204ENST00000472585 POLR2AP24928 1970 aaKnown RBP12.33□□□□□ -0.44
VCL-204ENST00000472585 TRPA1O75762 1119 aa12.33□□□□□ -0.44
VCL-204ENST00000472585 RAD17O75943 681 aa12.33□□□□□ -0.44
VCL-204ENST00000472585 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
VCL-204ENST00000472585 RGMBQ6NW40 437 aa12.33□□□□□ -0.44
VCL-204ENST00000472585 SP8Q8IXZ3 490 aa12.33□□□□□ -0.44
VCL-204ENST00000472585 CCDC102AQ96A19 550 aa12.33□□□□□ -0.44
VCL-204ENST00000472585 NLRP3Q96P20 1036 aa12.33□□□□□ -0.44
VCL-204ENST00000472585 UTP14AQ9BVJ6 771 aaKnown RBP12.33□□□□□ -0.44
VCL-204ENST00000472585 CDHR2Q9BYE9 1310 aa12.33□□□□□ -0.44
VCL-204ENST00000472585 KDM3BQ7LBC6 1761 aa12.33□□□□□ -0.44
VCL-204ENST00000472585 H7C1D1 291 aa12.32□□□□□ -0.44
VCL-204ENST00000472585 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
VCL-204ENST00000472585 CTU1Q7Z7A3 348 aaKnown RBP12.32□□□□□ -0.44
VCL-204ENST00000472585 USP48Q86UV5 1035 aa12.32□□□□□ -0.44
VCL-204ENST00000472585 NLRP10Q86W26 655 aa12.32□□□□□ -0.44
VCL-204ENST00000472585 C2orf69Q8N8R5 385 aa12.32□□□□□ -0.44
VCL-204ENST00000472585 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
VCL-204ENST00000472585 LAMB4A4D0S4 1761 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 BBOX1O75936 387 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 EGFRP00533 1210 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 ZNF157P51786 506 aaPredicted RBP12.31□□□□□ -0.44
VCL-204ENST00000472585 KIF23Q02241 960 aaPredicted RBP12.31□□□□□ -0.44
VCL-204ENST00000472585 KIAA2012Q0VF49 1180 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 KRT24Q2M2I5 525 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 PARP10Q53GL7 1025 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 COPS6Q7L5N1 327 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 KCNQ5Q9NR82 932 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 RNF186Q9NXI6 227 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 CNOT7Q9UIV1 285 aaKnown RBP12.31□□□□□ -0.44
VCL-204ENST00000472585 ERBB4Q15303 1308 aa12.31□□□□□ -0.44
VCL-204ENST00000472585 AIMP1Q12904 312 aaKnown RBP12.3□□□□□ -0.44
VCL-204ENST00000472585 DPP8Q6V1X1 898 aaPredicted RBP12.3□□□□□ -0.44
VCL-204ENST00000472585 MPNDQ8N594 471 aa12.3□□□□□ -0.44
VCL-204ENST00000472585 XAGE3Q8WTP9 111 aa12.3□□□□□ -0.44
VCL-204ENST00000472585 GBA2Q9HCG7 927 aaPredicted RBP12.3□□□□□ -0.44
VCL-204ENST00000472585 TSPYL4Q9UJ04 414 aa12.3□□□□□ -0.44
VCL-204ENST00000472585 DLG5Q8TDM6 1919 aa12.29□□□□□ -0.44
VCL-204ENST00000472585 FAM155AB1AL88 458 aaPredicted RBP12.29□□□□□ -0.44
VCL-204ENST00000472585 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
VCL-204ENST00000472585 KRT26Q7Z3Y9 468 aa12.29□□□□□ -0.44
VCL-204ENST00000472585 COL4A1P02462 1669 aa12.29□□□□□ -0.44
VCL-204ENST00000472585 RIPK4P57078 832 aa12.28□□□□□ -0.44
VCL-204ENST00000472585 PKN2Q16513 984 aaKnown RBP12.28□□□□□ -0.44
VCL-204ENST00000472585 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
VCL-204ENST00000472585 MICALL2Q8IY33 904 aa12.28□□□□□ -0.44
VCL-204ENST00000472585 DCPSQ96C86 337 aaKnown RBP12.28□□□□□ -0.44
VCL-204ENST00000472585 HDAC9Q9UKV0 1011 aa12.28□□□□□ -0.44
VCL-204ENST00000472585 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms