RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 IBTKQ9P2D0 1353 aaPredicted RBP13.11□□□□□ -0.31
UBE2F-220ENST00000472479 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
UBE2F-220ENST00000472479 H0YIN7 160 aa13.11□□□□□ -0.31
UBE2F-220ENST00000472479 CASP7P55210 303 aa13.11□□□□□ -0.31
UBE2F-220ENST00000472479 ATP8B2P98198 1209 aa13.11□□□□□ -0.31
UBE2F-220ENST00000472479 IFIT5Q13325 482 aaKnown RBP13.11□□□□□ -0.31
UBE2F-220ENST00000472479 OS9Q13438 667 aaPredicted RBP13.11□□□□□ -0.31
UBE2F-220ENST00000472479 EPHA10Q5JZY3 1008 aa13.11□□□□□ -0.31
UBE2F-220ENST00000472479 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
UBE2F-220ENST00000472479 ZNF622Q969S3 477 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBE2F-220ENST00000472479 CCDC136Q96JN2 1154 aa13.11□□□□□ -0.31
UBE2F-220ENST00000472479 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
UBE2F-220ENST00000472479 RWDD1Q9H446 243 aaPredicted RBP13.11□□□□□ -0.31
UBE2F-220ENST00000472479 C2CD5Q86YS7 1000 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 TMX4Q9H1E5 349 aaPredicted RBP13.1□□□□□ -0.31
UBE2F-220ENST00000472479 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
UBE2F-220ENST00000472479 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 ZBTB22O15209 634 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 FOXO4P98177 505 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 CEP85Q6P2H3 762 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 TTLL11Q8NHH1 800 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 RBM17Q96I25 401 aaKnown RBP13.1□□□□□ -0.31
UBE2F-220ENST00000472479 ANKRD36CQ5JPF3 1778 aa13.1□□□□□ -0.31
UBE2F-220ENST00000472479 ABCC12Q96J65 1359 aa13.09□□□□□ -0.31
UBE2F-220ENST00000472479 IGHMBP2P38935 993 aaKnown RBP13.09□□□□□ -0.31
UBE2F-220ENST00000472479 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
UBE2F-220ENST00000472479 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
UBE2F-220ENST00000472479 GREM2Q9H772 168 aa13.09□□□□□ -0.31
UBE2F-220ENST00000472479 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
UBE2F-220ENST00000472479 PDZRN3Q9UPQ7 1066 aa13.09□□□□□ -0.31
UBE2F-220ENST00000472479 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
UBE2F-220ENST00000472479 CSF1RP07333 972 aa13.08□□□□□ -0.32
UBE2F-220ENST00000472479 ITGA6P23229 1130 aa13.08□□□□□ -0.32
UBE2F-220ENST00000472479 G3BP1Q13283 466 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBE2F-220ENST00000472479 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
UBE2F-220ENST00000472479 FAM161AQ3B820 660 aa13.08□□□□□ -0.32
UBE2F-220ENST00000472479 ANKRD18AQ8IVF6 992 aa13.08□□□□□ -0.32
UBE2F-220ENST00000472479 KAZALD1Q96I82 304 aa13.08□□□□□ -0.32
UBE2F-220ENST00000472479 CNNM1Q9NRU3 951 aa13.08□□□□□ -0.32
UBE2F-220ENST00000472479 APBB1O00213 710 aa13.07□□□□□ -0.32
UBE2F-220ENST00000472479 SURF6O75683 361 aaKnown RBP13.07□□□□□ -0.32
UBE2F-220ENST00000472479 NPR1P16066 1061 aa13.07□□□□□ -0.32
UBE2F-220ENST00000472479 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
UBE2F-220ENST00000472479 SIL1Q9H173 461 aa13.07□□□□□ -0.32
UBE2F-220ENST00000472479 SEC31BQ9NQW1 1179 aa13.07□□□□□ -0.32
UBE2F-220ENST00000472479 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
UBE2F-220ENST00000472479 CHRNA5P30532 468 aa13.06□□□□□ -0.32
UBE2F-220ENST00000472479 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
UBE2F-220ENST00000472479 LDHAL6AQ6ZMR3 332 aa13.06□□□□□ -0.32
UBE2F-220ENST00000472479 C3orf67Q6ZVT6 689 aa13.06□□□□□ -0.32
UBE2F-220ENST00000472479 MASTLQ96GX5 879 aa13.06□□□□□ -0.32
UBE2F-220ENST00000472479 ZNF594Q96JF6 807 aaPredicted RBP13.06□□□□□ -0.32
UBE2F-220ENST00000472479 A0A0G2JLW4 131 aa13.05□□□□□ -0.32
UBE2F-220ENST00000472479 PTGER2P43116 358 aa13.05□□□□□ -0.32
UBE2F-220ENST00000472479 HSP90AB4PQ58FF6 505 aa13.05□□□□□ -0.32
UBE2F-220ENST00000472479 B4GALNT3Q6L9W6 998 aa13.05□□□□□ -0.32
UBE2F-220ENST00000472479 KLHDC4Q8TBB5 520 aa13.05□□□□□ -0.32
UBE2F-220ENST00000472479 TGFB2P61812 414 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 RPS8P62241 208 aaKnown RBP13.04□□□□□ -0.32
UBE2F-220ENST00000472479 MTX1Q13505 466 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 CNKSR1Q969H4 720 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 PA2G4Q9UQ80 394 aaKnown RBP13.04□□□□□ -0.32
UBE2F-220ENST00000472479 CD2APQ9Y5K6 639 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 SRGNP10124 158 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 DPEP1P16444 411 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 GRAPQ13588 217 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 GRAPLQ8TC17 118 aaPredicted RBP13.04□□□□□ -0.32
UBE2F-220ENST00000472479 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 CRAMP1Q96RY5 1269 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 WWC3Q9ULE0 1092 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
UBE2F-220ENST00000472479 CASZ1Q86V15 1759 aa13.03□□□□□ -0.32
UBE2F-220ENST00000472479 BBOX1O75936 387 aa13.03□□□□□ -0.32
UBE2F-220ENST00000472479 HDAC1Q13547 482 aaPredicted RBP13.03□□□□□ -0.32
UBE2F-220ENST00000472479 POLA2Q14181 598 aa13.03□□□□□ -0.32
UBE2F-220ENST00000472479 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
UBE2F-220ENST00000472479 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
UBE2F-220ENST00000472479 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
UBE2F-220ENST00000472479 PIM2Q9P1W9 311 aa13.03□□□□□ -0.32
UBE2F-220ENST00000472479 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.32
UBE2F-220ENST00000472479 EYA2O00167 538 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
UBE2F-220ENST00000472479 IGHDP01880 384 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 KCNJ4P48050 445 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 PTPN12Q05209 780 aaKnown RBP13.02□□□□□ -0.33
UBE2F-220ENST00000472479 CRY2Q49AN0 593 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 METTL24Q5JXM2 366 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 ANKRD45Q5TZF3 282 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 ERC1Q8IUD2 1116 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
UBE2F-220ENST00000472479 TTLL6Q8N841 843 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 GCC1Q96CN9 775 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 COPRSQ9NQ92 184 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 CEP126Q9P2H0 1117 aa13.02□□□□□ -0.33
UBE2F-220ENST00000472479 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
UBE2F-220ENST00000472479 KLRG2A4D1S0 409 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms