RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
SEC16A-209ENST00000472305 GPR162Q16538 588 aa16.18■□□□□ 0.18
SEC16A-209ENST00000472305 CRY2Q49AN0 593 aa16.18■□□□□ 0.18
SEC16A-209ENST00000472305 ANKRD44Q8N8A2 993 aa16.18■□□□□ 0.18
SEC16A-209ENST00000472305 TTLL11Q8NHH1 800 aa16.18■□□□□ 0.18
SEC16A-209ENST00000472305 BICC1Q9H694 974 aaKnown RBP16.18■□□□□ 0.18
SEC16A-209ENST00000472305 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
SEC16A-209ENST00000472305 LRRFIP2Q9Y608 721 aaKnown RBP16.18■□□□□ 0.18
SEC16A-209ENST00000472305 RIC1Q4ADV7 1423 aa16.18■□□□□ 0.18
SEC16A-209ENST00000472305 DDX60Q8IY21 1712 aaKnown RBP16.17■□□□□ 0.18
SEC16A-209ENST00000472305 H0YIN7 160 aa16.17■□□□□ 0.18
SEC16A-209ENST00000472305 CENPBP07199 599 aaPredicted RBP16.17■□□□□ 0.18
SEC16A-209ENST00000472305 CSF1RP07333 972 aa16.17■□□□□ 0.18
SEC16A-209ENST00000472305 ZNF622Q969S3 477 aaKnown RBP eCLIP16.17■□□□□ 0.18
SEC16A-209ENST00000472305 KIAA1551Q9HCM1 1747 aa16.16■□□□□ 0.18
SEC16A-209ENST00000472305 N4BP2Q86UW6 1770 aaPredicted RBP16.16■□□□□ 0.18
SEC16A-209ENST00000472305 COL4A1P02462 1669 aa16.16■□□□□ 0.18
SEC16A-209ENST00000472305 LMBR1LQ6UX01 489 aa16.16■□□□□ 0.18
SEC16A-209ENST00000472305 MASTLQ96GX5 879 aa16.16■□□□□ 0.18
SEC16A-209ENST00000472305 GREM2Q9H772 168 aa16.16■□□□□ 0.18
SEC16A-209ENST00000472305 KIF13BQ9NQT8 1826 aa16.16■□□□□ 0.18
SEC16A-209ENST00000472305 GNAI3P08754 354 aa16.15■□□□□ 0.18
SEC16A-209ENST00000472305 COL11A2P13942 1736 aaPredicted RBP16.15■□□□□ 0.18
SEC16A-209ENST00000472305 NPR1P16066 1061 aa16.15■□□□□ 0.18
SEC16A-209ENST00000472305 FAM161AQ3B820 660 aa16.15■□□□□ 0.18
SEC16A-209ENST00000472305 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
SEC16A-209ENST00000472305 DDX19BQ9UMR2 479 aa16.15■□□□□ 0.18
SEC16A-209ENST00000472305 HOXA10P31260 410 aaPredicted RBP16.14■□□□□ 0.17
SEC16A-209ENST00000472305 RABL6Q3YEC7 729 aaPredicted RBP16.14■□□□□ 0.17
SEC16A-209ENST00000472305 STYK1Q6J9G0 422 aa16.14■□□□□ 0.17
SEC16A-209ENST00000472305 EXOC6Q8TAG9 804 aa16.14■□□□□ 0.17
SEC16A-209ENST00000472305 RPGRQ92834 1020 aaKnown RBP16.14■□□□□ 0.17
SEC16A-209ENST00000472305 RBM17Q96I25 401 aaKnown RBP16.14■□□□□ 0.17
SEC16A-209ENST00000472305 ZBTB40Q9NUA8 1239 aa16.14■□□□□ 0.17
SEC16A-209ENST00000472305 CHMP3Q9Y3E7 222 aa16.14■□□□□ 0.17
SEC16A-209ENST00000472305 GNAI2P04899 355 aa16.13■□□□□ 0.17
SEC16A-209ENST00000472305 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
SEC16A-209ENST00000472305 PIM2Q9P1W9 311 aa16.13■□□□□ 0.17
SEC16A-209ENST00000472305 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
SEC16A-209ENST00000472305 PDZRN3Q9UPQ7 1066 aa16.13■□□□□ 0.17
SEC16A-209ENST00000472305 LAMB2P55268 1798 aa16.13■□□□□ 0.17
SEC16A-209ENST00000472305 HSP90B1P14625 803 aaKnown RBP16.12■□□□□ 0.17
SEC16A-209ENST00000472305 HSPA6P17066 643 aa16.12■□□□□ 0.17
SEC16A-209ENST00000472305 ITGA6P23229 1130 aa16.12■□□□□ 0.17
SEC16A-209ENST00000472305 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
SEC16A-209ENST00000472305 DDX46Q7L014 1031 aaKnown RBP16.12■□□□□ 0.17
SEC16A-209ENST00000472305 ZNF594Q96JF6 807 aaPredicted RBP16.12■□□□□ 0.17
SEC16A-209ENST00000472305 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
SEC16A-209ENST00000472305 RFX5P48382 616 aaPredicted RBP16.11■□□□□ 0.17
SEC16A-209ENST00000472305 GRAPQ13588 217 aa16.11■□□□□ 0.17
SEC16A-209ENST00000472305 TTLL6Q8N841 843 aa16.11■□□□□ 0.17
SEC16A-209ENST00000472305 KLHDC4Q8TBB5 520 aa16.11■□□□□ 0.17
SEC16A-209ENST00000472305 GRAPLQ8TC17 118 aaPredicted RBP16.11■□□□□ 0.17
SEC16A-209ENST00000472305 PNMA6EA0A0J9YXQ4 647 aa16.1■□□□□ 0.17
SEC16A-209ENST00000472305 DALRD3Q5D0E6 543 aaKnown RBP16.1■□□□□ 0.17
SEC16A-209ENST00000472305 PRPF40BQ6NWY9 871 aaKnown RBP16.1■□□□□ 0.17
SEC16A-209ENST00000472305 CNKSR1Q969H4 720 aa16.1■□□□□ 0.17
SEC16A-209ENST00000472305 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
SEC16A-209ENST00000472305 ANKRD18BA2A2Z9 1011 aa16.09■□□□□ 0.17
SEC16A-209ENST00000472305 YBX3P16989 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
SEC16A-209ENST00000472305 ALDH1B1P30837 517 aa16.09■□□□□ 0.17
SEC16A-209ENST00000472305 ATP8B2P98198 1209 aa16.09■□□□□ 0.17
SEC16A-209ENST00000472305 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
SEC16A-209ENST00000472305 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
SEC16A-209ENST00000472305 C7orf43Q8WVR3 580 aa16.09■□□□□ 0.17
SEC16A-209ENST00000472305 TAF1P21675 1872 aa16.09■□□□□ 0.17
SEC16A-209ENST00000472305 RTL9Q8NET4 1388 aa16.09■□□□□ 0.17
SEC16A-209ENST00000472305 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
SEC16A-209ENST00000472305 C21orf2O43822 256 aa16.08■□□□□ 0.16
SEC16A-209ENST00000472305 RPS8P62241 208 aaKnown RBP16.08■□□□□ 0.16
SEC16A-209ENST00000472305 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
SEC16A-209ENST00000472305 SIRT2Q8IXJ6 389 aa16.08■□□□□ 0.16
SEC16A-209ENST00000472305 PUS3Q9BZE2 481 aaKnown RBP16.08■□□□□ 0.16
SEC16A-209ENST00000472305 PA2G4Q9UQ80 394 aaKnown RBP16.08■□□□□ 0.16
SEC16A-209ENST00000472305 SRGAP3O43295 1099 aa16.07■□□□□ 0.16
SEC16A-209ENST00000472305 MTX1Q13505 466 aa16.07■□□□□ 0.16
SEC16A-209ENST00000472305 CCDC57Q2TAC2 916 aa16.07■□□□□ 0.16
SEC16A-209ENST00000472305 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
SEC16A-209ENST00000472305 HDAC5Q9UQL6 1122 aa16.07■□□□□ 0.16
SEC16A-209ENST00000472305 PCDHB15Q9Y5E8 787 aa16.07■□□□□ 0.16
SEC16A-209ENST00000472305 SLX4Q8IY92 1834 aa16.07■□□□□ 0.16
SEC16A-209ENST00000472305 BBOX1O75936 387 aa16.06■□□□□ 0.16
SEC16A-209ENST00000472305 PTPN12Q05209 780 aaKnown RBP16.06■□□□□ 0.16
SEC16A-209ENST00000472305 LRRC24Q50LG9 513 aa16.06■□□□□ 0.16
SEC16A-209ENST00000472305 CDC5LQ99459 802 aaKnown RBP16.06■□□□□ 0.16
SEC16A-209ENST00000472305 DLEC1Q9Y238 1755 aa16.05■□□□□ 0.16
SEC16A-209ENST00000472305 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
SEC16A-209ENST00000472305 POLA2Q14181 598 aa16.05■□□□□ 0.16
SEC16A-209ENST00000472305 ATP6V0A2Q9Y487 856 aa16.05■□□□□ 0.16
SEC16A-209ENST00000472305 WTIPA6NIX2 430 aaPredicted RBP16.04■□□□□ 0.16
SEC16A-209ENST00000472305 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
SEC16A-209ENST00000472305 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
SEC16A-209ENST00000472305 SP8Q8IXZ3 490 aa16.04■□□□□ 0.16
SEC16A-209ENST00000472305 SSH3Q8TE77 659 aa16.04■□□□□ 0.16
SEC16A-209ENST00000472305 CHMP4BQ9H444 224 aaKnown RBP16.04■□□□□ 0.16
SEC16A-209ENST00000472305 BSDC1Q9NW68 430 aaPredicted RBP16.04■□□□□ 0.16
SEC16A-209ENST00000472305 MYH3P11055 1940 aa16.04■□□□□ 0.16
SEC16A-209ENST00000472305 BRCA1P38398 1863 aaKnown RBP16.03■□□□□ 0.16
SEC16A-209ENST00000472305 GPSM2P81274 684 aa16.03■□□□□ 0.16
SEC16A-209ENST00000472305 RPAP2Q8IXW5 612 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms