RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 TMOD3Q9NYL9 352 aa12.71□□□□□ -0.37
APLF-204ENST00000471727 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.37
APLF-204ENST00000471727 UBR2Q8IWV8 1755 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 A0A0D9SFI3 127 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 TAF5LO75529 589 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 LETM1O95202 739 aaPredicted RBP12.7□□□□□ -0.38
APLF-204ENST00000471727 MCMDC2Q4G0Z9 681 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 DDX54Q8TDD1 881 aaKnown RBP12.7□□□□□ -0.38
APLF-204ENST00000471727 ISCA1Q9BUE6 129 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
APLF-204ENST00000471727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.7□□□□□ -0.38
APLF-204ENST00000471727 PAPPAQ13219 1627 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 EYA2O00167 538 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 A1BGP04217 495 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 SYT1P21579 422 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 TCIRG1Q13488 830 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 ADCK5Q3MIX3 580 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 KBTBD3Q8NAB2 608 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 HELLSQ9NRZ9 838 aa12.7□□□□□ -0.38
APLF-204ENST00000471727 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
APLF-204ENST00000471727 STARD3NLO95772 234 aa12.69□□□□□ -0.38
APLF-204ENST00000471727 HMGB1P09429 215 aaKnown RBP12.69□□□□□ -0.38
APLF-204ENST00000471727 RPS6KB1P23443 525 aa12.69□□□□□ -0.38
APLF-204ENST00000471727 PIP4K2AP48426 406 aaPredicted RBP12.69□□□□□ -0.38
APLF-204ENST00000471727 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
APLF-204ENST00000471727 DBNDD2Q9BQY9 259 aa12.69□□□□□ -0.38
APLF-204ENST00000471727 PLA2G12BQ9BX93 195 aa12.69□□□□□ -0.38
APLF-204ENST00000471727 AKAP2Q9Y2D5 859 aa12.69□□□□□ -0.38
APLF-204ENST00000471727 SH3TC1Q8TE82 1336 aa12.68□□□□□ -0.38
APLF-204ENST00000471727 F13A1P00488 732 aa12.68□□□□□ -0.38
APLF-204ENST00000471727 GJB2P29033 226 aa12.68□□□□□ -0.38
APLF-204ENST00000471727 HS1BP3Q53T59 392 aa12.68□□□□□ -0.38
APLF-204ENST00000471727 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
APLF-204ENST00000471727 KIF6Q6ZMV9 814 aa12.68□□□□□ -0.38
APLF-204ENST00000471727 ATG9AQ7Z3C6 839 aa12.68□□□□□ -0.38
APLF-204ENST00000471727 STRN4Q9NRL3 753 aa12.68□□□□□ -0.38
APLF-204ENST00000471727 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
APLF-204ENST00000471727 AFDNP55196 1824 aaKnown RBP12.68□□□□□ -0.38
APLF-204ENST00000471727 ZNF335Q9H4Z2 1342 aaPredicted RBP12.68□□□□□ -0.38
APLF-204ENST00000471727 PCCAP05165 728 aaPredicted RBP12.67□□□□□ -0.38
APLF-204ENST00000471727 CLCN1P35523 988 aa12.67□□□□□ -0.38
APLF-204ENST00000471727 UBE2HP62256 183 aa12.67□□□□□ -0.38
APLF-204ENST00000471727 FOXD4L5Q5VV16 416 aaPredicted RBP12.67□□□□□ -0.38
APLF-204ENST00000471727 USP48Q86UV5 1035 aa12.67□□□□□ -0.38
APLF-204ENST00000471727 CCDC83Q8IWF9 413 aa12.67□□□□□ -0.38
APLF-204ENST00000471727 FOXD4L4Q8WXT5 416 aaPredicted RBP12.67□□□□□ -0.38
APLF-204ENST00000471727 TMEM63CQ9P1W3 806 aa12.67□□□□□ -0.38
APLF-204ENST00000471727 STRCQ7RTU9 1775 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 ME3Q16798 604 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 CCDC57Q2TAC2 916 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
APLF-204ENST00000471727 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 CEP126Q9P2H0 1117 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 FAM184AQ8NB25 1140 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 NEUROD6Q96NK8 337 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 DNAJC2Q99543 621 aaKnown RBP12.66□□□□□ -0.38
APLF-204ENST00000471727 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
APLF-204ENST00000471727 ABCA3Q99758 1704 aa12.65□□□□□ -0.38
APLF-204ENST00000471727 ABCC12Q96J65 1359 aa12.65□□□□□ -0.38
APLF-204ENST00000471727 NUP188Q5SRE5 1749 aa12.65□□□□□ -0.38
APLF-204ENST00000471727 ESPNB1AK53 854 aa12.65□□□□□ -0.38
APLF-204ENST00000471727 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
APLF-204ENST00000471727 CCDC158Q5M9N0 1113 aa12.65□□□□□ -0.38
APLF-204ENST00000471727 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
APLF-204ENST00000471727 ZBTB38Q8NAP3 1195 aaPredicted RBP12.65□□□□□ -0.38
APLF-204ENST00000471727 TPCN1Q9ULQ1 816 aa12.65□□□□□ -0.38
APLF-204ENST00000471727 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
APLF-204ENST00000471727 CDHR2Q9BYE9 1310 aa12.65□□□□□ -0.38
APLF-204ENST00000471727 LARGE1O95461 756 aa12.64□□□□□ -0.39
APLF-204ENST00000471727 CSF1RP07333 972 aa12.64□□□□□ -0.39
APLF-204ENST00000471727 ZFYP08048 801 aaPredicted RBP12.64□□□□□ -0.39
APLF-204ENST00000471727 IFIT1P09914 478 aaKnown RBP12.64□□□□□ -0.39
APLF-204ENST00000471727 CPA1P15085 419 aa12.64□□□□□ -0.39
APLF-204ENST00000471727 UVSSAQ2YD98 709 aa12.64□□□□□ -0.39
APLF-204ENST00000471727 ZMYM1Q5SVZ6 1142 aa12.64□□□□□ -0.39
APLF-204ENST00000471727 CCDC183Q5T5S1 534 aa12.64□□□□□ -0.39
APLF-204ENST00000471727 LARP1BQ659C4 914 aaKnown RBP12.64□□□□□ -0.39
APLF-204ENST00000471727 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
APLF-204ENST00000471727 TSPY26PQ9H489 355 aa12.64□□□□□ -0.39
APLF-204ENST00000471727 RRAGDQ9NQL2 400 aaPredicted RBP12.64□□□□□ -0.39
APLF-204ENST00000471727 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
APLF-204ENST00000471727 ZNF609O15014 1411 aa12.64□□□□□ -0.39
APLF-204ENST00000471727 SYCE3A1L190 88 aa12.63□□□□□ -0.39
APLF-204ENST00000471727 PIGBQ92521 554 aa12.63□□□□□ -0.39
APLF-204ENST00000471727 CDCA7Q9BWT1 371 aaPredicted RBP12.63□□□□□ -0.39
APLF-204ENST00000471727 RBSNQ9H1K0 784 aa12.63□□□□□ -0.39
APLF-204ENST00000471727 MAP3K15Q6ZN16 1313 aa12.63□□□□□ -0.39
APLF-204ENST00000471727 A0A1B0GUL7 405 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 RNF113AO15541 343 aaKnown RBP12.62□□□□□ -0.39
APLF-204ENST00000471727 TOB2Q14106 344 aaPredicted RBP12.62□□□□□ -0.39
APLF-204ENST00000471727 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
APLF-204ENST00000471727 EDC3Q96F86 508 aaKnown RBP12.62□□□□□ -0.39
APLF-204ENST00000471727 PDLIM2Q96JY6 352 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 LLPHQ9BRT6 129 aaKnown RBP12.62□□□□□ -0.39
APLF-204ENST00000471727 BTG4Q9NY30 223 aa12.62□□□□□ -0.39
APLF-204ENST00000471727 KIF3AQ9Y496 699 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms