RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 IFIT1BQ5T764 474 aaKnown RBP15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 GOLGA6L9A6NEM1 432 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 GJA3Q9Y6H8 435 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 RPGRIP1LQ68CZ1 1315 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 SMIM23A6NLE4 172 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 WDR63Q8IWG1 891 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 GOLGA4Q13439 2230 aaKnown RBP15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 ERBINQ96RT1 1412 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 CUL4BQ13620 913 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 GEN1Q17RS7 908 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 CCDC183Q5T5S1 534 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 C6orf163Q5TEZ5 329 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 PPP1R42Q7Z4L9 355 aa15.1■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 SPAG5Q96R06 1193 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 MCM3P25205 808 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 STAT6P42226 847 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 SMARCC1Q92922 1105 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 CWC25Q9NXE8 425 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 OPA1O60313 960 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 LDHCP07864 332 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 HARSP12081 509 aaKnown RBP15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 CACYBPQ9HB71 228 aaKnown RBP15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 PFDN4Q9NQP4 134 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 IMPG2Q9BZV3 1241 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 PKD2L1Q9P0L9 805 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 EPSTI1Q96J88 318 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 USP25Q9UHP3 1055 aa15.09■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 HMGB1P09429 215 aaKnown RBP15.08■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 ATP6V1AP38606 617 aa15.08■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 ZBTB16Q05516 673 aa15.08■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 PPP2R5CQ13362 524 aa15.08■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 RASA3Q14644 834 aa15.08■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 KMT5BQ4FZB7 885 aa15.08■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 CRNKL1Q9BZJ0 848 aaKnown RBP15.08■□□□□ 0.01
NPHP3-ACAD11-201ENST00000471702 MCM4P33991 863 aa15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 BANK1Q8NDB2 785 aa15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 SCAND2PQ9GZW5 306 aaPredicted RBP15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 TXNDC16Q9P2K2 825 aa15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 HDAC9Q9UKV0 1011 aa15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 SKAP1Q86WV1 359 aa15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 MKRN1Q9UHC7 482 aaKnown RBP15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 ORC3Q9UBD5 711 aaPredicted RBP15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 N4BP3O15049 544 aa15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 AKR1B10O60218 316 aa15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 FAM184BQ9ULE4 1060 aa15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 NOD1Q9Y239 953 aa15.08■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 RRP9O43818 475 aaKnown RBP15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 CEBPAP49715 358 aaPredicted RBP15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 SEPT8Q92599 483 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 UBAP1LF5GYI3 381 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 HYPKQ9NX55 129 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 FCHSD2O94868 740 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 CYP7A1P22680 504 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 SPECC1LQ69YQ0 1117 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 DNAAF4Q8WXU2 420 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 05e-6■■□□□ 14.3
NPHP3-ACAD11-201ENST00000471702 SBNO2Q9Y2G9 1366 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 ANKRD30BQ9BXX2 1392 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 NAIPQ13075 1403 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 KCNA4P22459 653 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 GJB2P29033 226 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 GTF2F1P35269 517 aaKnown RBP eCLIP15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 KIF5AQ12840 1032 aa15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 RPAP2Q8IXW5 612 aaPredicted RBP15.07■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 ESPNB1AK53 854 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 CEP112Q8N8E3 955 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 CCDC25Q86WR0 208 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 NME9Q86XW9 330 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 SMARCC2Q8TAQ2 1214 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 CCDC155Q8N6L0 562 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 BACH1O14867 736 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 WTAPQ15007 396 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 PPP2R5DQ14738 602 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 AMOTQ4VCS5 1084 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 FAM114A1Q8IWE2 563 aa15.06■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 GMNNO75496 209 aa15.05■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 TFCP2L1Q9NZI6 479 aa15.05■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 BEGAINQ9BUH8 593 aa15.05■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 SLC52A1Q9NWF4 448 aa15.05■□□□□ 0
NPHP3-ACAD11-201ENST00000471702 CCDC65Q8IXS2 484 aa15.05■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 ERMNQ8TAM6 284 aa15.05■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 SPDYE3A6NKU9 549 aa15.05■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 MICALCLQ6ZW33 695 aa15.05■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 KRT28Q7Z3Y7 464 aa15.05■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 PLVAPQ9BX97 442 aa15.05■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 CCDC14Q49A88 953 aa15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 CCDC152Q4G0S7 254 aa15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 ANAPC4Q9UJX5 808 aa15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 NAPAP54920 295 aa15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 RPUSD2Q8IZ73 545 aaKnown RBP15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 NOL3O60936 208 aaKnown RBP15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 TCEANC2Q96MN5 208 aa15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 PLIN2Q99541 437 aa15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 DBF4Q9UBU7 674 aaPredicted RBP15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 LIMCH1Q9UPQ0 1083 aa15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 GNG11P61952 73 aa15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 JDP2Q8WYK2 163 aa15.04■□□□□ -0
NPHP3-ACAD11-201ENST00000471702 SLC4A4Q9Y6R1 1079 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms