RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 KLHDC4Q8TBB5 520 aa23.94■■□□□ 1.42
PSPC1-203ENST00000471658 RWDD1Q9H446 243 aaPredicted RBP23.94■■□□□ 1.42
PSPC1-203ENST00000471658 GREM2Q9H772 168 aa23.94■■□□□ 1.42
PSPC1-203ENST00000471658 NLRP3Q96P20 1036 aa23.93■■□□□ 1.42
PSPC1-203ENST00000471658 PA2G4Q9UQ80 394 aaKnown RBP23.93■■□□□ 1.42
PSPC1-203ENST00000471658 NRXN2Q9P2S2 1712 aa23.93■■□□□ 1.42
PSPC1-203ENST00000471658 RFX5P48382 616 aaPredicted RBP23.92■■□□□ 1.42
PSPC1-203ENST00000471658 HSP90B1P14625 803 aaKnown RBP23.92■■□□□ 1.42
PSPC1-203ENST00000471658 TNRC6CQ9HCJ0 1690 aaKnown RBP23.91■■□□□ 1.42
PSPC1-203ENST00000471658 LAMB2P55268 1798 aa23.91■■□□□ 1.42
PSPC1-203ENST00000471658 HMMRO75330 724 aa23.91■■□□□ 1.42
PSPC1-203ENST00000471658 SF3B3Q15393 1217 aaKnown RBP23.91■■□□□ 1.42
PSPC1-203ENST00000471658 ZNF594Q96JF6 807 aaPredicted RBP23.91■■□□□ 1.42
PSPC1-203ENST00000471658 SEC31BQ9NQW1 1179 aa23.91■■□□□ 1.42
PSPC1-203ENST00000471658 ITGA6P23229 1130 aa23.89■■□□□ 1.42
PSPC1-203ENST00000471658 PTPN12Q05209 780 aaKnown RBP23.89■■□□□ 1.42
PSPC1-203ENST00000471658 CCDC152Q4G0S7 254 aa23.89■■□□□ 1.42
PSPC1-203ENST00000471658 KDM2BQ8NHM5 1336 aa23.89■■□□□ 1.41
PSPC1-203ENST00000471658 CCDC57Q2TAC2 916 aa23.88■■□□□ 1.41
PSPC1-203ENST00000471658 SGIP1Q9BQI5 828 aa23.88■■□□□ 1.41
PSPC1-203ENST00000471658 BRIP1Q9BX63 1249 aa23.88■■□□□ 1.41
PSPC1-203ENST00000471658 EXOC6BQ9Y2D4 811 aa23.88■■□□□ 1.41
PSPC1-203ENST00000471658 IFIT5Q13325 482 aaKnown RBP23.88■■□□□ 1.41
PSPC1-203ENST00000471658 DCTPP1Q9H773 170 aa23.88■■□□□ 1.41
PSPC1-203ENST00000471658 MYH3P11055 1940 aa23.87■■□□□ 1.41
PSPC1-203ENST00000471658 RIC1Q4ADV7 1423 aa23.87■■□□□ 1.41
PSPC1-203ENST00000471658 SURF6O75683 361 aaKnown RBP23.87■■□□□ 1.41
PSPC1-203ENST00000471658 POLD1P28340 1107 aa23.87■■□□□ 1.41
PSPC1-203ENST00000471658 SIL1Q9H173 461 aa23.87■■□□□ 1.41
PSPC1-203ENST00000471658 ANKRD18BA2A2Z9 1011 aa23.86■■□□□ 1.41
PSPC1-203ENST00000471658 PTGER2P43116 358 aa23.86■■□□□ 1.41
PSPC1-203ENST00000471658 ANKRD31Q8N7Z5 1873 aa23.86■■□□□ 1.41
PSPC1-203ENST00000471658 COL4A1P02462 1669 aa23.85■■□□□ 1.41
PSPC1-203ENST00000471658 KLRG2A4D1S0 409 aaPredicted RBP23.85■■□□□ 1.41
PSPC1-203ENST00000471658 APBB1O00213 710 aa23.85■■□□□ 1.41
PSPC1-203ENST00000471658 PUS3Q9BZE2 481 aaKnown RBP23.85■■□□□ 1.41
PSPC1-203ENST00000471658 COPRSQ9NQ92 184 aa23.84■■□□□ 1.41
PSPC1-203ENST00000471658 CRY2Q49AN0 593 aa23.84■■□□□ 1.41
PSPC1-203ENST00000471658 CENPQQ7L2Z9 268 aaPredicted RBP23.84■■□□□ 1.41
PSPC1-203ENST00000471658 SMC5Q8IY18 1101 aa23.84■■□□□ 1.41
PSPC1-203ENST00000471658 NOP58Q9Y2X3 529 aaKnown RBP23.84■■□□□ 1.41
PSPC1-203ENST00000471658 RTL9Q8NET4 1388 aa23.83■■□□□ 1.41
PSPC1-203ENST00000471658 LRRC24Q50LG9 513 aa23.83■■□□□ 1.41
PSPC1-203ENST00000471658 TAF7LQ5H9L4 462 aa23.83■■□□□ 1.41
PSPC1-203ENST00000471658 CELF1Q92879 486 aaKnown RBP23.83■■□□□ 1.41
PSPC1-203ENST00000471658 PDE6BP35913 854 aa23.82■■□□□ 1.4
PSPC1-203ENST00000471658 TAF1P21675 1872 aa23.82■■□□□ 1.4
PSPC1-203ENST00000471658 DDX46Q7L014 1031 aaKnown RBP23.81■■□□□ 1.4
PSPC1-203ENST00000471658 RPGRQ92834 1020 aaKnown RBP23.81■■□□□ 1.4
PSPC1-203ENST00000471658 GCC1Q96CN9 775 aa23.81■■□□□ 1.4
PSPC1-203ENST00000471658 C10orf71Q711Q0 1435 aa23.81■■□□□ 1.4
PSPC1-203ENST00000471658 SRGNP10124 158 aa23.81■■□□□ 1.4
PSPC1-203ENST00000471658 CHRNA5P30532 468 aa23.81■■□□□ 1.4
PSPC1-203ENST00000471658 G3BP1Q13283 466 aaKnown RBP eCLIP23.81■■□□□ 1.4
PSPC1-203ENST00000471658 C2CD5Q86YS7 1000 aa23.81■■□□□ 1.4
PSPC1-203ENST00000471658 SPON1Q9HCB6 807 aa23.81■■□□□ 1.4
PSPC1-203ENST00000471658 SMARCA5O60264 1052 aaPredicted RBP23.8■■□□□ 1.4
PSPC1-203ENST00000471658 ATG9AQ7Z3C6 839 aa23.8■■□□□ 1.4
PSPC1-203ENST00000471658 BCL11AQ9H165 835 aa23.8■■□□□ 1.4
PSPC1-203ENST00000471658 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.8■■□□□ 1.4
PSPC1-203ENST00000471658 EYA2O00167 538 aa23.79■■□□□ 1.4
PSPC1-203ENST00000471658 OS9Q13438 667 aaPredicted RBP23.79■■□□□ 1.4
PSPC1-203ENST00000471658 ANKRD45Q5TZF3 282 aa23.79■■□□□ 1.4
PSPC1-203ENST00000471658 LDHAL6AQ6ZMR3 332 aa23.79■■□□□ 1.4
PSPC1-203ENST00000471658 SLC51AQ86UW1 340 aa23.79■■□□□ 1.4
PSPC1-203ENST00000471658 SKAP1Q86WV1 359 aa23.79■■□□□ 1.4
PSPC1-203ENST00000471658 RBM17Q96I25 401 aaKnown RBP23.79■■□□□ 1.4
PSPC1-203ENST00000471658 SASH1O94885 1247 aa23.78■■□□□ 1.4
PSPC1-203ENST00000471658 HOXA10P31260 410 aaPredicted RBP23.78■■□□□ 1.4
PSPC1-203ENST00000471658 ANKRD18AQ8IVF6 992 aa23.78■■□□□ 1.4
PSPC1-203ENST00000471658 CDC5LQ99459 802 aaKnown RBP23.78■■□□□ 1.4
PSPC1-203ENST00000471658 PDZRN3Q9UPQ7 1066 aa23.78■■□□□ 1.4
PSPC1-203ENST00000471658 RPS8P62241 208 aaKnown RBP23.77■■□□□ 1.4
PSPC1-203ENST00000471658 GRAPQ13588 217 aa23.77■■□□□ 1.4
PSPC1-203ENST00000471658 GRAPLQ8TC17 118 aaPredicted RBP23.77■■□□□ 1.4
PSPC1-203ENST00000471658 H0YIN7 160 aa23.77■■□□□ 1.4
PSPC1-203ENST00000471658 IGHMBP2P38935 993 aaKnown RBP23.77■■□□□ 1.4
PSPC1-203ENST00000471658 ZNF622Q969S3 477 aaKnown RBP eCLIP23.77■■□□□ 1.42e-7■■■□□ 15.9
PSPC1-203ENST00000471658 MPHOSPH8Q99549 860 aa23.77■■□□□ 1.4
PSPC1-203ENST00000471658 CNNM1Q9NRU3 951 aa23.77■■□□□ 1.4
PSPC1-203ENST00000471658 PPP1R1BQ9UD71 204 aaPredicted RBP23.77■■□□□ 1.4
PSPC1-203ENST00000471658 RIPOR2Q9Y4F9 1068 aa23.77■■□□□ 1.4
PSPC1-203ENST00000471658 COL11A2P13942 1736 aaPredicted RBP23.77■■□□□ 1.4
PSPC1-203ENST00000471658 RAB11FIP3O75154 756 aa23.76■■□□□ 1.39
PSPC1-203ENST00000471658 NPR1P16066 1061 aa23.76■■□□□ 1.39
PSPC1-203ENST00000471658 HSP90AB4PQ58FF6 505 aa23.76■■□□□ 1.39
PSPC1-203ENST00000471658 KLHL34Q8N239 644 aa23.76■■□□□ 1.39
PSPC1-203ENST00000471658 RHPN1Q8TCX5 695 aa23.76■■□□□ 1.39
PSPC1-203ENST00000471658 MASTLQ96GX5 879 aa23.76■■□□□ 1.39
PSPC1-203ENST00000471658 IL1RAPL2Q9NP60 686 aa23.76■■□□□ 1.39
PSPC1-203ENST00000471658 A0A0G2JLW4 131 aa23.75■■□□□ 1.39
PSPC1-203ENST00000471658 CIAO1O76071 339 aa23.75■■□□□ 1.39
PSPC1-203ENST00000471658 NUCB1Q02818 461 aa23.75■■□□□ 1.39
PSPC1-203ENST00000471658 TFCP2Q12800 502 aa23.75■■□□□ 1.39
PSPC1-203ENST00000471658 CRAMP1Q96RY5 1269 aa23.75■■□□□ 1.39
PSPC1-203ENST00000471658 IL15P40933 162 aaPredicted RBP23.74■■□□□ 1.39
PSPC1-203ENST00000471658 LRRCC1Q9C099 1032 aa23.74■■□□□ 1.39
PSPC1-203ENST00000471658 LNPKQ9C0E8 428 aa23.74■■□□□ 1.39
PSPC1-203ENST00000471658 DPEP1P16444 411 aa23.73■■□□□ 1.39
PSPC1-203ENST00000471658 C16orf71Q8IYS4 520 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms