RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 ZNF594Q96JF6 807 aaPredicted RBP14.69□□□□□ -0.06
LINC00880-201ENST00000471357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.69□□□□□ -0.06
LINC00880-201ENST00000471357 ANKRD18BA2A2Z9 1011 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 CIAO1O76071 339 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 ITGA6P23229 1130 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 TFCP2Q12800 502 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 TAF7LQ5H9L4 462 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 TSHZ3Q63HK5 1081 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 ATG9AQ7Z3C6 839 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 AACSQ86V21 672 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 EAF2Q96CJ1 260 aaPredicted RBP14.68□□□□□ -0.06
LINC00880-201ENST00000471357 GREM2Q9H772 168 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 NYXQ9GZU5 481 aa14.68□□□□□ -0.06
LINC00880-201ENST00000471357 TTC41PQ6P2S7 1318 aa14.67□□□□□ -0.06
LINC00880-201ENST00000471357 UBR3Q6ZT12 1888 aa14.67□□□□□ -0.06
LINC00880-201ENST00000471357 SDSP20132 328 aa14.67□□□□□ -0.06
LINC00880-201ENST00000471357 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
LINC00880-201ENST00000471357 LRRC24Q50LG9 513 aa14.67□□□□□ -0.06
LINC00880-201ENST00000471357 C4AP0C0L4 1744 aa14.67□□□□□ -0.06
LINC00880-201ENST00000471357 MYH3P11055 1940 aa14.67□□□□□ -0.06
LINC00880-201ENST00000471357 SEC24BO95487 1268 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 ERFEQ4G0M1 354 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 GPATCH3Q96I76 525 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 PUS3Q9BZE2 481 aaKnown RBP14.66□□□□□ -0.06
LINC00880-201ENST00000471357 CCDC8Q9H0W5 538 aaPredicted RBP14.66□□□□□ -0.06
LINC00880-201ENST00000471357 CDC45O75419 566 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 CCDC152Q4G0S7 254 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 TNNI3KQ59H18 835 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 TPTE2Q6XPS3 522 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 NBPF5PQ86XG9 351 aaPredicted RBP14.66□□□□□ -0.06
LINC00880-201ENST00000471357 PI4K2BQ8TCG2 481 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 AKT1S1Q96B36 256 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 ECHDC1Q9NTX5 307 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 FPGT-TNNI3KV9GXZ4 949 aa14.66□□□□□ -0.06
LINC00880-201ENST00000471357 TNS1Q9HBL0 1735 aaKnown RBP14.65□□□□□ -0.06
LINC00880-201ENST00000471357 ERC2O15083 957 aa14.65□□□□□ -0.06
LINC00880-201ENST00000471357 SLC10A5Q5PT55 438 aa14.65□□□□□ -0.06
LINC00880-201ENST00000471357 GPR108Q9NPR9 543 aa14.65□□□□□ -0.06
LINC00880-201ENST00000471357 TFCP2L1Q9NZI6 479 aa14.65□□□□□ -0.06
LINC00880-201ENST00000471357 GYS1P13807 737 aa14.65□□□□□ -0.06
LINC00880-201ENST00000471357 LDHAL6AQ6ZMR3 332 aa14.65□□□□□ -0.06
LINC00880-201ENST00000471357 GLRX3O76003 335 aaKnown RBP14.64□□□□□ -0.07
LINC00880-201ENST00000471357 NFIXQ14938 502 aa14.64□□□□□ -0.07
LINC00880-201ENST00000471357 ZNF827Q17R98 1081 aa14.64□□□□□ -0.07
LINC00880-201ENST00000471357 TBC1D9Q6ZT07 1266 aa14.64□□□□□ -0.07
LINC00880-201ENST00000471357 CEP126Q9P2H0 1117 aa14.64□□□□□ -0.07
LINC00880-201ENST00000471357 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
LINC00880-201ENST00000471357 TRIM6-TRIM34B2RNG4 842 aa14.63□□□□□ -0.07
LINC00880-201ENST00000471357 TLR7Q9NYK1 1049 aaKnown RBP14.63□□□□□ -0.07
LINC00880-201ENST00000471357 RTL9Q8NET4 1388 aa14.63□□□□□ -0.07
LINC00880-201ENST00000471357 COL24A1Q17RW2 1714 aa14.63□□□□□ -0.07
LINC00880-201ENST00000471357 RGPD3A6NKT7 1758 aaPredicted RBP14.63□□□□□ -0.07
LINC00880-201ENST00000471357 LAMB2P55268 1798 aa14.63□□□□□ -0.07
LINC00880-201ENST00000471357 RGPD4Q7Z3J3 1758 aa14.63□□□□□ -0.07
LINC00880-201ENST00000471357 SF3B3Q15393 1217 aaKnown RBP14.63□□□□□ -0.07
LINC00880-201ENST00000471357 RILPL2Q969X0 211 aa14.63□□□□□ -0.07
LINC00880-201ENST00000471357 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
LINC00880-201ENST00000471357 CNNM1Q9NRU3 951 aa14.63□□□□□ -0.07
LINC00880-201ENST00000471357 RIPOR2Q9Y4F9 1068 aa14.63□□□□□ -0.07
LINC00880-201ENST00000471357 CARMIL3Q8ND23 1372 aa14.63□□□□□ -0.07
LINC00880-201ENST00000471357 FLAD1Q8NFF5 587 aa14.62□□□□□ -0.07
LINC00880-201ENST00000471357 CAMKK2Q96RR4 588 aa14.62□□□□□ -0.07
LINC00880-201ENST00000471357 SEC31BQ9NQW1 1179 aa14.62□□□□□ -0.07
LINC00880-201ENST00000471357 DBNLQ9UJU6 430 aaKnown RBP14.62□□□□□ -0.07
LINC00880-201ENST00000471357 NPHP1O15259 732 aa14.61□□□□□ -0.07
LINC00880-201ENST00000471357 EN1Q05925 392 aaPredicted RBP14.61□□□□□ -0.07
LINC00880-201ENST00000471357 CASC1Q6TDU7 716 aa14.61□□□□□ -0.07
LINC00880-201ENST00000471357 NLRP3Q96P20 1036 aa14.61□□□□□ -0.07
LINC00880-201ENST00000471357 AKAP2Q9Y2D5 859 aa14.61□□□□□ -0.07
LINC00880-201ENST00000471357 ABCC12Q96J65 1359 aa14.61□□□□□ -0.07
LINC00880-201ENST00000471357 MFAP1P55081 439 aaKnown RBP14.61□□□□□ -0.07
LINC00880-201ENST00000471357 SF3B2Q13435 895 aaKnown RBP14.61□□□□□ -0.07
LINC00880-201ENST00000471357 EZH2Q15910 746 aaKnown RBP14.61□□□□□ -0.07
LINC00880-201ENST00000471357 METTL24Q5JXM2 366 aa14.61□□□□□ -0.07
LINC00880-201ENST00000471357 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
LINC00880-201ENST00000471357 DBNDD2Q9BQY9 259 aa14.61□□□□□ -0.07
LINC00880-201ENST00000471357 EIF5BO60841 1220 aaKnown RBP14.6□□□□□ -0.07
LINC00880-201ENST00000471357 TM4SF1P30408 202 aa14.6□□□□□ -0.07
LINC00880-201ENST00000471357 IGHMBP2P38935 993 aaKnown RBP14.6□□□□□ -0.07
LINC00880-201ENST00000471357 TIMM10P62072 90 aa14.6□□□□□ -0.07
LINC00880-201ENST00000471357 C3orf67Q6ZVT6 689 aa14.6□□□□□ -0.07
LINC00880-201ENST00000471357 COL23A1Q86Y22 540 aaPredicted RBP14.6□□□□□ -0.07
LINC00880-201ENST00000471357 CNTROBQ8N137 903 aa14.6□□□□□ -0.07
LINC00880-201ENST00000471357 MPHOSPH8Q99549 860 aa14.6□□□□□ -0.07
LINC00880-201ENST00000471357 A0A1B0GUL7 405 aa14.59□□□□□ -0.07
LINC00880-201ENST00000471357 MSH5O43196 834 aa14.59□□□□□ -0.07
LINC00880-201ENST00000471357 MAP4K4O95819 1239 aaPredicted RBP14.59□□□□□ -0.07
LINC00880-201ENST00000471357 ANP32AP39687 249 aaKnown RBP14.59□□□□□ -0.07
LINC00880-201ENST00000471357 CDC5LQ99459 802 aaKnown RBP14.59□□□□□ -0.07
LINC00880-201ENST00000471357 ZNF609O15014 1411 aa14.59□□□□□ -0.07
LINC00880-201ENST00000471357 TUBGCP6Q96RT7 1819 aa14.59□□□□□ -0.07
LINC00880-201ENST00000471357 CCDC24Q8N4L8 307 aa14.59□□□□□ -0.07
LINC00880-201ENST00000471357 CNBD1Q8NA66 436 aa14.59□□□□□ -0.07
LINC00880-201ENST00000471357 MROH5Q6ZUA9 1318 aa14.58□□□□□ -0.07
LINC00880-201ENST00000471357 SERPINB2P05120 415 aa14.58□□□□□ -0.08
LINC00880-201ENST00000471357 ATP5JP18859 108 aa14.58□□□□□ -0.08
LINC00880-201ENST00000471357 BAG6P46379 1132 aa14.58□□□□□ -0.08
LINC00880-201ENST00000471357 NLGN1Q8N2Q7 840 aa14.58□□□□□ -0.08
LINC00880-201ENST00000471357 BOLA2Q9H3K6 86 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms