RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 FANCLQ9NW38 375 aa6.72□□□□□ -1.33
GCFC2-205ENST00000470197 ESYT3A0FGR9 886 aa6.72□□□□□ -1.33
GCFC2-205ENST00000470197 SPON2Q9BUD6 331 aa6.72□□□□□ -1.33
GCFC2-205ENST00000470197 SNPHO15079 494 aa6.72□□□□□ -1.33
GCFC2-205ENST00000470197 HIRAP54198 1017 aaPredicted RBP6.72□□□□□ -1.33
GCFC2-205ENST00000470197 FAM160A1Q05DH4 1040 aa6.72□□□□□ -1.33
GCFC2-205ENST00000470197 CABP1Q9NZU7 370 aa6.72□□□□□ -1.33
GCFC2-205ENST00000470197 FAN1Q9Y2M0 1017 aa6.72□□□□□ -1.33
GCFC2-205ENST00000470197 THRAP3Q9Y2W1 955 aaKnown RBP6.72□□□□□ -1.33
GCFC2-205ENST00000470197 CDK2AP1O14519 115 aa6.71□□□□□ -1.33
GCFC2-205ENST00000470197 EREGO14944 169 aa6.71□□□□□ -1.33
GCFC2-205ENST00000470197 CNTN3Q9P232 1028 aa6.71□□□□□ -1.33
GCFC2-205ENST00000470197 RAB33AQ14088 237 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 GOLGA8CPA6NN73 597 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 GRM2Q14416 872 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 MAP3K11Q16584 847 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 AGBL1Q96MI9 1066 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 CDK15Q96Q40 435 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 DNAJC7Q99615 494 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 ESYT1Q9BSJ8 1104 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 PPT2Q9UMR5 302 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 KCNMB2Q9Y691 235 aa6.71□□□□□ -1.34
GCFC2-205ENST00000470197 USP5P45974 858 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 SQSTM1Q13501 440 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 PGBD3Q8N328 593 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 MRFAP1L1Q96HT8 127 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 DEPDC7Q96QD5 511 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 DDX56Q9NY93 547 aaKnown RBP6.7□□□□□ -1.34
GCFC2-205ENST00000470197 WNT7BP56706 349 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 PRR12Q9ULL5 1215 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 LEMD3Q9Y2U8 911 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 CENPCQ03188 943 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 TEAD4Q15561 434 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 CKAP2LQ8IYA6 745 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 ST7Q9NRC1 585 aa6.7□□□□□ -1.34
GCFC2-205ENST00000470197 MICAL2O94851 1124 aa6.69□□□□□ -1.34
GCFC2-205ENST00000470197 SSBP05455 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
GCFC2-205ENST00000470197 C1orf127Q8N9H9 656 aa6.69□□□□□ -1.34
GCFC2-205ENST00000470197 ANAPC16Q96DE5 110 aa6.69□□□□□ -1.34
GCFC2-205ENST00000470197 CDV3Q9UKY7 258 aaKnown RBP6.69□□□□□ -1.34
GCFC2-205ENST00000470197 SIAH2O43255 324 aa6.69□□□□□ -1.34
GCFC2-205ENST00000470197 PEAR1Q5VY43 1037 aaPredicted RBP6.69□□□□□ -1.34
GCFC2-205ENST00000470197 IER2Q9BTL4 223 aa6.69□□□□□ -1.34
GCFC2-205ENST00000470197 FAM8A1Q9UBU6 413 aa6.69□□□□□ -1.34
GCFC2-205ENST00000470197 SEPT6Q14141 434 aa6.69□□□□□ -1.34
GCFC2-205ENST00000470197 JAMLQ86YT9 394 aa6.69□□□□□ -1.34
GCFC2-205ENST00000470197 THOC2Q8NI27 1593 aaKnown RBP6.69□□□□□ -1.34
GCFC2-205ENST00000470197 RNF223E7ERA6 249 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 POU3F3P20264 500 aaPredicted RBP6.68□□□□□ -1.34
GCFC2-205ENST00000470197 GARTP22102 1010 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 VARSP26640 1264 aaKnown RBP6.68□□□□□ -1.34
GCFC2-205ENST00000470197 ANAPC15P60006 121 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 PLEKHG4Q58EX7 1191 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
GCFC2-205ENST00000470197 KIAA0825Q8IV33 1275 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 CCDC116Q8IYX3 515 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 KCTD12Q96CX2 325 aaKnown RBP6.68□□□□□ -1.34
GCFC2-205ENST00000470197 DNAJC25Q9H1X3 360 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 NFE2L2Q16236 605 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 ZNF296Q8WUU4 475 aaPredicted RBP6.68□□□□□ -1.34
GCFC2-205ENST00000470197 ZFYVE28Q9HCC9 887 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 CYP2E1P05181 493 aaPredicted RBP6.68□□□□□ -1.34
GCFC2-205ENST00000470197 ST13P50502 369 aaKnown RBP6.68□□□□□ -1.34
GCFC2-205ENST00000470197 FGD1P98174 961 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 VPS37DQ86XT2 251 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 FBXO27Q8NI29 283 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 TSR2Q969E8 191 aaKnown RBP6.68□□□□□ -1.34
GCFC2-205ENST00000470197 PRDM16Q9HAZ2 1276 aa6.68□□□□□ -1.34
GCFC2-205ENST00000470197 TTF2Q9UNY4 1162 aaKnown RBP6.68□□□□□ -1.34
GCFC2-205ENST00000470197 CYP2U1Q7Z449 544 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 EHBP1Q8NDI1 1231 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 SHDQ96IW2 340 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 TNKS2Q9H2K2 1166 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 ESF1Q9H501 851 aaKnown RBP6.67□□□□□ -1.34
GCFC2-205ENST00000470197 ZNF395Q9H8N7 513 aaPredicted RBP6.67□□□□□ -1.34
GCFC2-205ENST00000470197 C21orf62-AS1Q17RA5 79 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 ACPPP15309 386 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 EIF4A3P38919 411 aaKnown RBP6.67□□□□□ -1.34
GCFC2-205ENST00000470197 GYS2P54840 703 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 MYT1Q01538 1121 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 EVI5LQ96CN4 794 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 RHOVQ96L33 236 aa6.67□□□□□ -1.34
GCFC2-205ENST00000470197 KIF21AQ7Z4S6 1674 aa6.66□□□□□ -1.34
GCFC2-205ENST00000470197 TRPA1O75762 1119 aa6.66□□□□□ -1.34
GCFC2-205ENST00000470197 SOX9P48436 509 aa6.66□□□□□ -1.34
GCFC2-205ENST00000470197 CDKN1CP49918 316 aaPredicted RBP6.66□□□□□ -1.34
GCFC2-205ENST00000470197 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.66□□□□□ -1.348e-7■■■■■ 134.6
GCFC2-205ENST00000470197 PEG3Q9GZU2 1588 aa6.66□□□□□ -1.34
GCFC2-205ENST00000470197 RASIP1Q5U651 963 aa6.66□□□□□ -1.34
GCFC2-205ENST00000470197 SPC25Q9HBM1 224 aa6.66□□□□□ -1.34
GCFC2-205ENST00000470197 RSF1Q96T23 1441 aaPredicted RBP6.66□□□□□ -1.34
GCFC2-205ENST00000470197 CCDC194A0A1B0GVG4 234 aa6.65□□□□□ -1.34
GCFC2-205ENST00000470197 CELA3AP09093 270 aa6.65□□□□□ -1.34
GCFC2-205ENST00000470197 IRX6P78412 446 aaPredicted RBP6.65□□□□□ -1.34
GCFC2-205ENST00000470197 NFX1Q12986 1120 aaKnown RBP6.65□□□□□ -1.34
GCFC2-205ENST00000470197 CLN3Q13286 438 aa6.65□□□□□ -1.34
GCFC2-205ENST00000470197 RC3H1Q5TC82 1133 aaKnown RBP6.65□□□□□ -1.34
GCFC2-205ENST00000470197 KANSL3Q9P2N6 904 aa6.65□□□□□ -1.34
GCFC2-205ENST00000470197 MSRB2Q9Y3D2 182 aa6.65□□□□□ -1.34
GCFC2-205ENST00000470197 SMAD7O15105 426 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms