RNA–Protein interactions for RNA: ENST00000469772.5

GTF2E1-202, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 5

Gene GTF2E1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-202ENST00000469772 DZIP1LQ8IYY4 767 aaKnown RBP16.4■□□□□ 0.22
GTF2E1-202ENST00000469772 CDC5LQ99459 802 aaKnown RBP16.4■□□□□ 0.22
GTF2E1-202ENST00000469772 RTL9Q8NET4 1388 aa16.39■□□□□ 0.21
GTF2E1-202ENST00000469772 COL11A2P13942 1736 aaPredicted RBP16.39■□□□□ 0.21
GTF2E1-202ENST00000469772 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
GTF2E1-202ENST00000469772 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.21
GTF2E1-202ENST00000469772 GRAPQ13588 217 aa16.39■□□□□ 0.21
GTF2E1-202ENST00000469772 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
GTF2E1-202ENST00000469772 ARFGEF1Q9Y6D6 1849 aa16.39■□□□□ 0.21
GTF2E1-202ENST00000469772 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
GTF2E1-202ENST00000469772 CCDC93Q567U6 631 aa16.38■□□□□ 0.21
GTF2E1-202ENST00000469772 RTKN2Q8IZC4 609 aa16.38■□□□□ 0.21
GTF2E1-202ENST00000469772 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
GTF2E1-202ENST00000469772 MYH3P11055 1940 aa16.37■□□□□ 0.21
GTF2E1-202ENST00000469772 PPEF1O14829 653 aaPredicted RBP16.37■□□□□ 0.21
GTF2E1-202ENST00000469772 CASP7P55210 303 aa16.37■□□□□ 0.21
GTF2E1-202ENST00000469772 YBX3P16989 372 aaKnown RBP eCLIP16.36■□□□□ 0.21
GTF2E1-202ENST00000469772 PDE3AQ14432 1141 aa16.36■□□□□ 0.21
GTF2E1-202ENST00000469772 ANKRD18AQ8IVF6 992 aa16.36■□□□□ 0.21
GTF2E1-202ENST00000469772 TTLL11Q8NHH1 800 aa16.36■□□□□ 0.21
GTF2E1-202ENST00000469772 CLUAP1Q96AJ1 413 aa16.36■□□□□ 0.21
GTF2E1-202ENST00000469772 ANKRD18BA2A2Z9 1011 aa16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 CSF1RP07333 972 aa16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 IGHMBP2P38935 993 aaKnown RBP16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 RPS8P62241 208 aaKnown RBP16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 IFIT5Q13325 482 aaKnown RBP16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 ITPRIPQ8IWB1 547 aa16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 USP44Q9H0E7 712 aa16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 ATP6V0A2Q9Y487 856 aa16.35■□□□□ 0.21
GTF2E1-202ENST00000469772 C21orf2O43822 256 aa16.34■□□□□ 0.21
GTF2E1-202ENST00000469772 NBPF7P0C2Y1 421 aaPredicted RBP16.34■□□□□ 0.21
GTF2E1-202ENST00000469772 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
GTF2E1-202ENST00000469772 C3orf67Q6ZVT6 689 aa16.34■□□□□ 0.21
GTF2E1-202ENST00000469772 SP8Q8IXZ3 490 aa16.34■□□□□ 0.21
GTF2E1-202ENST00000469772 SUPT20HQ8NEM7 779 aa16.34■□□□□ 0.21
GTF2E1-202ENST00000469772 JARID2Q92833 1246 aaPredicted RBP16.34■□□□□ 0.21
GTF2E1-202ENST00000469772 WWC3Q9ULE0 1092 aa16.34■□□□□ 0.21
GTF2E1-202ENST00000469772 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
GTF2E1-202ENST00000469772 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.2
GTF2E1-202ENST00000469772 MPHOSPH8Q99549 860 aa16.33■□□□□ 0.2
GTF2E1-202ENST00000469772 DDX19BQ9UMR2 479 aa16.33■□□□□ 0.2
GTF2E1-202ENST00000469772 GNAI2P04899 355 aa16.32■□□□□ 0.2
GTF2E1-202ENST00000469772 ITGA6P23229 1130 aa16.32■□□□□ 0.2
GTF2E1-202ENST00000469772 FOXO4P98177 505 aa16.32■□□□□ 0.2
GTF2E1-202ENST00000469772 LMBR1LQ6UX01 489 aa16.32■□□□□ 0.2
GTF2E1-202ENST00000469772 VPS33BQ9H267 617 aa16.32■□□□□ 0.2
GTF2E1-202ENST00000469772 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
GTF2E1-202ENST00000469772 GREM2Q9H772 168 aa16.32■□□□□ 0.2
GTF2E1-202ENST00000469772 LTBP3Q9NS15 1303 aa16.32■□□□□ 0.2
GTF2E1-202ENST00000469772 SLX4Q8IY92 1834 aa16.31■□□□□ 0.2
GTF2E1-202ENST00000469772 RABL6Q3YEC7 729 aaPredicted RBP16.31■□□□□ 0.2
GTF2E1-202ENST00000469772 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
GTF2E1-202ENST00000469772 SUCLG2Q96I99 432 aa16.31■□□□□ 0.2
GTF2E1-202ENST00000469772 BSDC1Q9NW68 430 aaPredicted RBP16.31■□□□□ 0.2
GTF2E1-202ENST00000469772 CACNA1SQ13698 1873 aa16.31■□□□□ 0.2
GTF2E1-202ENST00000469772 FKBP4Q02790 459 aaKnown RBP eCLIP16.3■□□□□ 0.2
GTF2E1-202ENST00000469772 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
GTF2E1-202ENST00000469772 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
GTF2E1-202ENST00000469772 DPP8Q6V1X1 898 aaPredicted RBP16.3■□□□□ 0.2
GTF2E1-202ENST00000469772 CCDC85AQ96PX6 553 aaPredicted RBP16.3■□□□□ 0.2
GTF2E1-202ENST00000469772 PSMD1Q99460 953 aa16.3■□□□□ 0.2
GTF2E1-202ENST00000469772 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
GTF2E1-202ENST00000469772 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
GTF2E1-202ENST00000469772 ZC3H4Q9UPT8 1303 aaKnown RBP16.29■□□□□ 0.2
GTF2E1-202ENST00000469772 LMNB1P20700 586 aa16.29■□□□□ 0.2
GTF2E1-202ENST00000469772 MPNDQ8N594 471 aa16.29■□□□□ 0.2
GTF2E1-202ENST00000469772 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
GTF2E1-202ENST00000469772 MEIS3Q99687 375 aa16.29■□□□□ 0.2
GTF2E1-202ENST00000469772 ANKRD2Q9GZV1 360 aa16.29■□□□□ 0.2
GTF2E1-202ENST00000469772 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
GTF2E1-202ENST00000469772 EYA3Q99504 573 aa16.28■□□□□ 0.2
GTF2E1-202ENST00000469772 SEC31BQ9NQW1 1179 aa16.28■□□□□ 0.2
GTF2E1-202ENST00000469772 FBXO3Q9UK99 471 aa16.28■□□□□ 0.2
GTF2E1-202ENST00000469772 CHD4Q14839 1912 aa16.27■□□□□ 0.2
GTF2E1-202ENST00000469772 PANK1Q8TE04 598 aa16.27■□□□□ 0.2
GTF2E1-202ENST00000469772 ANKIB1Q9P2G1 1089 aa16.27■□□□□ 0.2
GTF2E1-202ENST00000469772 LRRFIP2Q9Y608 721 aaKnown RBP16.27■□□□□ 0.2
GTF2E1-202ENST00000469772 XDHP47989 1333 aa16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 ZBTB7BO15156 539 aaPredicted RBP16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 RLBP1P12271 317 aa16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 EPHA10Q5JZY3 1008 aa16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 LDHAL6AQ6ZMR3 332 aa16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 KAZALD1Q96I82 304 aa16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 RTFDC1Q9BY42 306 aaPredicted RBP16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 PODXL2Q9NZ53 605 aa16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 NSFL1CQ9UNZ2 370 aaKnown RBP16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 FER1L6Q2WGJ9 1857 aa16.26■□□□□ 0.19
GTF2E1-202ENST00000469772 LRRC37AA6NMS7 1700 aa16.25■□□□□ 0.19
GTF2E1-202ENST00000469772 NFKBIEO00221 500 aa16.25■□□□□ 0.19
GTF2E1-202ENST00000469772 PLIN1O60240 522 aa16.25■□□□□ 0.19
GTF2E1-202ENST00000469772 ATP2B4P23634 1241 aa16.25■□□□□ 0.19
GTF2E1-202ENST00000469772 MTX1Q13505 466 aa16.25■□□□□ 0.19
GTF2E1-202ENST00000469772 ANKRD44Q8N8A2 993 aa16.25■□□□□ 0.19
GTF2E1-202ENST00000469772 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
GTF2E1-202ENST00000469772 GGA1Q9UJY5 639 aa16.25■□□□□ 0.19
GTF2E1-202ENST00000469772 TNNQ9UQP3 1299 aa16.25■□□□□ 0.19
GTF2E1-202ENST00000469772 MROH5Q6ZUA9 1318 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms