RNA–Protein interactions for RNA: ENST00000469017.6

SPIN1-203, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 2,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-203ENST00000469017 TAF1P21675 1872 aa25.19■■□□□ 1.62
SPIN1-203ENST00000469017 HDAC5Q9UQL6 1122 aa25.19■■□□□ 1.62
SPIN1-203ENST00000469017 APBB1O00213 710 aa25.18■■□□□ 1.62
SPIN1-203ENST00000469017 CSF1RP07333 972 aa25.18■■□□□ 1.62
SPIN1-203ENST00000469017 ST5P78524 1137 aa25.18■■□□□ 1.62
SPIN1-203ENST00000469017 MTX1Q13505 466 aa25.18■■□□□ 1.62
SPIN1-203ENST00000469017 SLC10A5Q5PT55 438 aa25.18■■□□□ 1.62
SPIN1-203ENST00000469017 SSH3Q8TE77 659 aa25.18■■□□□ 1.62
SPIN1-203ENST00000469017 SEC31BQ9NQW1 1179 aa25.18■■□□□ 1.62
SPIN1-203ENST00000469017 COL4A1P02462 1669 aa25.18■■□□□ 1.62
SPIN1-203ENST00000469017 HDAC1Q13547 482 aaPredicted RBP25.17■■□□□ 1.62
SPIN1-203ENST00000469017 RWDD1Q9H446 243 aaPredicted RBP25.17■■□□□ 1.62
SPIN1-203ENST00000469017 NRXN2Q9P2S2 1712 aa25.17■■□□□ 1.62
SPIN1-203ENST00000469017 EXOC6BQ9Y2D4 811 aa25.17■■□□□ 1.62
SPIN1-203ENST00000469017 POLA2Q14181 598 aa25.17■■□□□ 1.62
SPIN1-203ENST00000469017 MTFR1LQ9H019 292 aa25.17■■□□□ 1.62
SPIN1-203ENST00000469017 SIL1Q9H173 461 aa25.17■■□□□ 1.62
SPIN1-203ENST00000469017 ANKRD31Q8N7Z5 1873 aa25.16■■□□□ 1.62
SPIN1-203ENST00000469017 RFX5P48382 616 aaPredicted RBP25.16■■□□□ 1.62
SPIN1-203ENST00000469017 SKAP1Q86WV1 359 aa25.16■■□□□ 1.62
SPIN1-203ENST00000469017 NLRP3Q96P20 1036 aa25.16■■□□□ 1.62
SPIN1-203ENST00000469017 ITGA6P23229 1130 aa25.15■■□□□ 1.62
SPIN1-203ENST00000469017 KDM2BQ8NHM5 1336 aa25.15■■□□□ 1.62
SPIN1-203ENST00000469017 HMMRO75330 724 aa25.14■■□□□ 1.61
SPIN1-203ENST00000469017 SURF6O75683 361 aaKnown RBP25.13■■□□□ 1.61
SPIN1-203ENST00000469017 PTPN12Q05209 780 aaKnown RBP25.13■■□□□ 1.61
SPIN1-203ENST00000469017 CCDC57Q2TAC2 916 aa25.13■■□□□ 1.61
SPIN1-203ENST00000469017 SOCS7O14512 581 aa25.13■■□□□ 1.61
SPIN1-203ENST00000469017 IFIT5Q13325 482 aaKnown RBP25.12■■□□□ 1.61
SPIN1-203ENST00000469017 CCDC152Q4G0S7 254 aa25.12■■□□□ 1.61
SPIN1-203ENST00000469017 SLC51AQ86UW1 340 aa25.12■■□□□ 1.61
SPIN1-203ENST00000469017 SF3B3Q15393 1217 aaKnown RBP25.11■■□□□ 1.61
SPIN1-203ENST00000469017 PUS3Q9BZE2 481 aaKnown RBP25.11■■□□□ 1.61
SPIN1-203ENST00000469017 DCTPP1Q9H773 170 aa25.11■■□□□ 1.61
SPIN1-203ENST00000469017 SPEF2Q9C093 1822 aa25.1■■□□□ 1.61
SPIN1-203ENST00000469017 HSP90B1P14625 803 aaKnown RBP25.09■■□□□ 1.61
SPIN1-203ENST00000469017 LRRC24Q50LG9 513 aa25.09■■□□□ 1.61
SPIN1-203ENST00000469017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.09■■□□□ 1.61
SPIN1-203ENST00000469017 ANKRD18BA2A2Z9 1011 aa25.09■■□□□ 1.61
SPIN1-203ENST00000469017 PTGER2P43116 358 aa25.09■■□□□ 1.61
SPIN1-203ENST00000469017 TAF7LQ5H9L4 462 aa25.09■■□□□ 1.61
SPIN1-203ENST00000469017 CELF1Q92879 486 aaKnown RBP25.09■■□□□ 1.61
SPIN1-203ENST00000469017 SGIP1Q9BQI5 828 aa25.09■■□□□ 1.61
SPIN1-203ENST00000469017 BRIP1Q9BX63 1249 aa25.09■■□□□ 1.61
SPIN1-203ENST00000469017 SMARCA5O60264 1052 aaPredicted RBP25.08■■□□□ 1.61
SPIN1-203ENST00000469017 CENPQQ7L2Z9 268 aaPredicted RBP25.08■■□□□ 1.61
SPIN1-203ENST00000469017 UTRNP46939 3433 aa25.08■■□□□ 1.6
SPIN1-203ENST00000469017 POLD1P28340 1107 aa25.08■■□□□ 1.6
SPIN1-203ENST00000469017 PPP1R1BQ9UD71 204 aaPredicted RBP25.08■■□□□ 1.6
SPIN1-203ENST00000469017 COL11A2P13942 1736 aaPredicted RBP25.07■■□□□ 1.6
SPIN1-203ENST00000469017 CHRNA5P30532 468 aa25.07■■□□□ 1.6
SPIN1-203ENST00000469017 SMC5Q8IY18 1101 aa25.07■■□□□ 1.6
SPIN1-203ENST00000469017 OS9Q13438 667 aaPredicted RBP25.06■■□□□ 1.6
SPIN1-203ENST00000469017 KLHL34Q8N239 644 aa25.06■■□□□ 1.6
SPIN1-203ENST00000469017 COPRSQ9NQ92 184 aa25.06■■□□□ 1.6
SPIN1-203ENST00000469017 CRY2Q49AN0 593 aa25.06■■□□□ 1.6
SPIN1-203ENST00000469017 ANKRD45Q5TZF3 282 aa25.06■■□□□ 1.6
SPIN1-203ENST00000469017 RPGRQ92834 1020 aaKnown RBP25.05■■□□□ 1.6
SPIN1-203ENST00000469017 RIC1Q4ADV7 1423 aa25.04■■□□□ 1.6
SPIN1-203ENST00000469017 LDHAL6AQ6ZMR3 332 aa25.04■■□□□ 1.6
SPIN1-203ENST00000469017 DDX46Q7L014 1031 aaKnown RBP25.04■■□□□ 1.6
SPIN1-203ENST00000469017 ATG9AQ7Z3C6 839 aa25.04■■□□□ 1.6
SPIN1-203ENST00000469017 IL1RAPL2Q9NP60 686 aa25.04■■□□□ 1.6
SPIN1-203ENST00000469017 WWC3Q9ULE0 1092 aa25.04■■□□□ 1.6
SPIN1-203ENST00000469017 NOP58Q9Y2X3 529 aaKnown RBP25.04■■□□□ 1.6
SPIN1-203ENST00000469017 KLRG2A4D1S0 409 aaPredicted RBP25.03■■□□□ 1.6
SPIN1-203ENST00000469017 SASH1O94885 1247 aa25.03■■□□□ 1.6
SPIN1-203ENST00000469017 G3BP1Q13283 466 aaKnown RBP eCLIP25.03■■□□□ 1.6
SPIN1-203ENST00000469017 C2CD5Q86YS7 1000 aa25.03■■□□□ 1.6
SPIN1-203ENST00000469017 GCC1Q96CN9 775 aa25.03■■□□□ 1.6
SPIN1-203ENST00000469017 PDZRN3Q9UPQ7 1066 aa25.03■■□□□ 1.6
SPIN1-203ENST00000469017 C10orf71Q711Q0 1435 aa25.03■■□□□ 1.6
SPIN1-203ENST00000469017 SRGNP10124 158 aa25.03■■□□□ 1.6
SPIN1-203ENST00000469017 PDE6BP35913 854 aa25.03■■□□□ 1.6
SPIN1-203ENST00000469017 LNPKQ9C0E8 428 aa25.03■■□□□ 1.6
SPIN1-203ENST00000469017 RTL9Q8NET4 1388 aa25.02■■□□□ 1.6
SPIN1-203ENST00000469017 CNNM1Q9NRU3 951 aa25.02■■□□□ 1.6
SPIN1-203ENST00000469017 EYA2O00167 538 aa25.01■■□□□ 1.59
SPIN1-203ENST00000469017 ZNF622Q969S3 477 aaKnown RBP eCLIP25.01■■□□□ 1.59
SPIN1-203ENST00000469017 ANKRD18AQ8IVF6 992 aa25.01■■□□□ 1.59
SPIN1-203ENST00000469017 HELBQ8NG08 1087 aaPredicted RBP25.01■■□□□ 1.59
SPIN1-203ENST00000469017 MPHOSPH8Q99549 860 aa25.01■■□□□ 1.59
SPIN1-203ENST00000469017 SPON1Q9HCB6 807 aa25.01■■□□□ 1.59
SPIN1-203ENST00000469017 CACNA1SQ13698 1873 aa25.01■■□□□ 1.59
SPIN1-203ENST00000469017 A0A0G2JLW4 131 aa25■■□□□ 1.59
SPIN1-203ENST00000469017 C16orf71Q8IYS4 520 aaPredicted RBP25■■□□□ 1.59
SPIN1-203ENST00000469017 CDC5LQ99459 802 aaKnown RBP25■■□□□ 1.59
SPIN1-203ENST00000469017 IGHMBP2P38935 993 aaKnown RBP25■■□□□ 1.59
SPIN1-203ENST00000469017 RPS8P62241 208 aaKnown RBP25■■□□□ 1.59
SPIN1-203ENST00000469017 TFCP2Q12800 502 aa25■■□□□ 1.59
SPIN1-203ENST00000469017 RHPN1Q8TCX5 695 aa25■■□□□ 1.59
SPIN1-203ENST00000469017 RBM17Q96I25 401 aaKnown RBP24.99■■□□□ 1.59
SPIN1-203ENST00000469017 RIPOR2Q9Y4F9 1068 aa24.99■■□□□ 1.59
SPIN1-203ENST00000469017 H0YIN7 160 aa24.98■■□□□ 1.59
SPIN1-203ENST00000469017 SNAP23O00161 211 aa24.98■■□□□ 1.59
SPIN1-203ENST00000469017 NUCB1Q02818 461 aa24.98■■□□□ 1.59
SPIN1-203ENST00000469017 GRAPQ13588 217 aa24.98■■□□□ 1.59
SPIN1-203ENST00000469017 GRAPLQ8TC17 118 aaPredicted RBP24.98■■□□□ 1.59
SPIN1-203ENST00000469017 LRRCC1Q9C099 1032 aa24.98■■□□□ 1.59
SPIN1-203ENST00000469017 WTIPA6NIX2 430 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms